RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 SRYQ05066 204 aa14.3□□□□□ -0.12
HPS1-202ENST00000338546 SRSF6Q13247 344 aaKnown RBP14.3□□□□□ -0.12
HPS1-202ENST00000338546 RAB35Q15286 201 aa14.3□□□□□ -0.12
HPS1-202ENST00000338546 CCDC92Q53HC0 331 aaPredicted RBP14.3□□□□□ -0.12
HPS1-202ENST00000338546 ASPHD2Q6ICH7 369 aa14.3□□□□□ -0.12
HPS1-202ENST00000338546 CMTM4Q8IZR5 234 aa14.3□□□□□ -0.12
HPS1-202ENST00000338546 ZNF283Q8N7M2 679 aa14.3□□□□□ -0.12
HPS1-202ENST00000338546 HTRA1Q92743 480 aa14.3□□□□□ -0.12
HPS1-202ENST00000338546 SPTSSAQ969W0 71 aa14.3□□□□□ -0.12
HPS1-202ENST00000338546 RFT1Q96AA3 541 aa14.3□□□□□ -0.12
HPS1-202ENST00000338546 HAVCR1Q96D42 359 aa14.3□□□□□ -0.12
HPS1-202ENST00000338546 ZC3HAV1LQ96H79 300 aaKnown RBP14.3□□□□□ -0.12
HPS1-202ENST00000338546 SMAD5Q99717 465 aaKnown RBP14.3□□□□□ -0.12
HPS1-202ENST00000338546 SLCO5A1Q9H2Y9 848 aa14.3□□□□□ -0.12
HPS1-202ENST00000338546 LDAHQ9H6V9 325 aa14.3□□□□□ -0.12
HPS1-202ENST00000338546 NCOA6Q14686 2063 aaPredicted RBP14.3□□□□□ -0.12
HPS1-202ENST00000338546 A0A0B4J203 849 aa14.3□□□□□ -0.12
HPS1-202ENST00000338546 A0A0U1RQV5 110 aa14.3□□□□□ -0.12
HPS1-202ENST00000338546 A0A1B0GTI1 187 aa14.3□□□□□ -0.12
HPS1-202ENST00000338546 LOC390937A0A1W2PQ73 354 aa14.3□□□□□ -0.12
HPS1-202ENST00000338546 IGHG3P01860 377 aa14.3□□□□□ -0.12
HPS1-202ENST00000338546 YES1P07947 543 aa14.3□□□□□ -0.12
HPS1-202ENST00000338546 DDOSTP39656 456 aa14.3□□□□□ -0.12
HPS1-202ENST00000338546 INPP1P49441 399 aa14.3□□□□□ -0.12
HPS1-202ENST00000338546 PRKXP51817 358 aa14.3□□□□□ -0.12
HPS1-202ENST00000338546 RAB11BQ15907 218 aa14.3□□□□□ -0.12
HPS1-202ENST00000338546 DOK3Q7L591 496 aa14.3□□□□□ -0.12
HPS1-202ENST00000338546 PRSS45Q7RTY3 260 aa14.3□□□□□ -0.12
HPS1-202ENST00000338546 CDH26Q8IXH8 852 aa14.3□□□□□ -0.12
HPS1-202ENST00000338546 OR5D14Q8NGL3 314 aa14.3□□□□□ -0.12
HPS1-202ENST00000338546 ZNF775Q96BV0 537 aaPredicted RBP14.3□□□□□ -0.12
HPS1-202ENST00000338546 ABHD1Q96SE0 405 aa14.3□□□□□ -0.12
HPS1-202ENST00000338546 FOXB1Q99853 325 aa14.3□□□□□ -0.12
HPS1-202ENST00000338546 THAP7Q9BT49 309 aaPredicted RBP14.3□□□□□ -0.12
HPS1-202ENST00000338546 PRRG4Q9BZD6 226 aa14.3□□□□□ -0.12
HPS1-202ENST00000338546 TAS2R4Q9NYW5 299 aa14.3□□□□□ -0.12
HPS1-202ENST00000338546 ZNF175Q9Y473 711 aa14.3□□□□□ -0.12
HPS1-202ENST00000338546 KCNMB2Q9Y691 235 aa14.3□□□□□ -0.12
HPS1-202ENST00000338546 PLA2G10O15496 165 aa14.29□□□□□ -0.12
HPS1-202ENST00000338546 IGLV3-1P01715 115 aa14.29□□□□□ -0.12
HPS1-202ENST00000338546 ERCC1P07992 297 aaPredicted RBP14.29□□□□□ -0.12
HPS1-202ENST00000338546 RFX2P48378 723 aa14.29□□□□□ -0.12
HPS1-202ENST00000338546 DEFB109BQ30KR1 87 aa14.29□□□□□ -0.12
HPS1-202ENST00000338546 C1orf100Q5SVJ3 147 aa14.29□□□□□ -0.12
HPS1-202ENST00000338546 ZNF529Q6P280 563 aa14.29□□□□□ -0.12
HPS1-202ENST00000338546 Q6ZSR3 168 aa14.29□□□□□ -0.12
HPS1-202ENST00000338546 PGAP1Q75T13 922 aa14.29□□□□□ -0.12
HPS1-202ENST00000338546 ZNF627Q7L945 461 aa14.29□□□□□ -0.12
HPS1-202ENST00000338546 NRARPQ7Z6K4 114 aa14.29□□□□□ -0.12
HPS1-202ENST00000338546 PLPP7Q8NBV4 271 aa14.29□□□□□ -0.12
HPS1-202ENST00000338546 OR8B12Q8NGG6 310 aa14.29□□□□□ -0.12
HPS1-202ENST00000338546 OR6M1Q8NGM8 313 aa14.29□□□□□ -0.12
HPS1-202ENST00000338546 SLC25A38Q96DW6 304 aa14.29□□□□□ -0.12
HPS1-202ENST00000338546 FBXO17Q96EF6 278 aa14.29□□□□□ -0.12
HPS1-202ENST00000338546 WDYHV1Q96HA8 205 aa14.29□□□□□ -0.12
HPS1-202ENST00000338546 RBFOX1Q9NWB1 397 aaKnown RBP14.29□□□□□ -0.12
HPS1-202ENST00000338546 TIMM10BQ9Y5J6 103 aa14.29□□□□□ -0.12
HPS1-202ENST00000338546 GVINP1Q7Z2Y8 2422 aa14.28□□□□□ -0.12
HPS1-202ENST00000338546 ZFHX2Q9C0A1 2572 aaPredicted RBP14.28□□□□□ -0.12
HPS1-202ENST00000338546 FAM186AA6NE01 2351 aa14.28□□□□□ -0.12
HPS1-202ENST00000338546 LOC100289279A0A1B0GTE1 492 aa14.28□□□□□ -0.12
HPS1-202ENST00000338546 FARS2O95363 451 aaKnown RBP14.28□□□□□ -0.12
HPS1-202ENST00000338546 FCGR2AP12318 317 aa14.28□□□□□ -0.12
HPS1-202ENST00000338546 TAB1Q15750 504 aa14.28□□□□□ -0.12
HPS1-202ENST00000338546 CEACAM16Q2WEN9 425 aa14.28□□□□□ -0.12
HPS1-202ENST00000338546 DRAM2Q6UX65 266 aa14.28□□□□□ -0.12
HPS1-202ENST00000338546 IGFL3Q6UXB1 125 aa14.28□□□□□ -0.12
HPS1-202ENST00000338546 LRRC18Q8N456 261 aa14.28□□□□□ -0.12
HPS1-202ENST00000338546 SLC22A24Q8N4F4 322 aa14.28□□□□□ -0.12
HPS1-202ENST00000338546 DNAAF1Q8NEP3 725 aa14.28□□□□□ -0.12
HPS1-202ENST00000338546 OR52H1Q8NGJ2 320 aa14.28□□□□□ -0.12
HPS1-202ENST00000338546 SYNPRQ8TBG9 265 aa14.28□□□□□ -0.12
HPS1-202ENST00000338546 TRIM63Q969Q1 353 aa14.28□□□□□ -0.12
HPS1-202ENST00000338546 PTX4Q96A99 478 aa14.28□□□□□ -0.12
HPS1-202ENST00000338546 C10orf35Q96D05 121 aa14.28□□□□□ -0.12
HPS1-202ENST00000338546 ZNF837Q96EG3 531 aaPredicted RBP14.28□□□□□ -0.12
HPS1-202ENST00000338546 C11orf54Q9H0W9 315 aaPredicted RBP14.28□□□□□ -0.12
HPS1-202ENST00000338546 DEFB127Q9H1M4 99 aa14.28□□□□□ -0.12
HPS1-202ENST00000338546 EXO5Q9H790 373 aa14.28□□□□□ -0.12
HPS1-202ENST00000338546 RHBDL2Q9NX52 303 aa14.28□□□□□ -0.12
HPS1-202ENST00000338546 PLEK2Q9NYT0 353 aa14.28□□□□□ -0.12
HPS1-202ENST00000338546 ATPIF1Q9UII2 106 aa14.28□□□□□ -0.12
HPS1-202ENST00000338546 SLC5A6Q9Y289 635 aa14.28□□□□□ -0.12
HPS1-202ENST00000338546 A0A1B0GVC2 190 aa14.27□□□□□ -0.12
HPS1-202ENST00000338546 SGCEO43556 437 aa14.27□□□□□ -0.12
HPS1-202ENST00000338546 KRT33AO76009 404 aa14.27□□□□□ -0.12
HPS1-202ENST00000338546 ITGB2P05107 769 aa14.27□□□□□ -0.12
HPS1-202ENST00000338546 ITGA5P08648 1049 aa14.27□□□□□ -0.12
HPS1-202ENST00000338546 SPNP16150 400 aa14.27□□□□□ -0.12
HPS1-202ENST00000338546 HTR2CP28335 458 aa14.27□□□□□ -0.12
HPS1-202ENST00000338546 BDKRB2P30411 391 aa14.27□□□□□ -0.12
HPS1-202ENST00000338546 MAP2K3P46734 347 aa14.27□□□□□ -0.12
HPS1-202ENST00000338546 KRTAP27-1Q3LI81 207 aa14.27□□□□□ -0.12
HPS1-202ENST00000338546 RNFT1Q5M7Z0 435 aa14.27□□□□□ -0.12
HPS1-202ENST00000338546 LINGO2Q7L985 606 aa14.27□□□□□ -0.12
HPS1-202ENST00000338546 ZNF554Q86TJ5 538 aa14.27□□□□□ -0.12
HPS1-202ENST00000338546 LYPD6Q86Y78 171 aa14.27□□□□□ -0.12
HPS1-202ENST00000338546 MCEMP1Q8IX19 187 aa14.27□□□□□ -0.12
HPS1-202ENST00000338546 DUSP18Q8NEJ0 188 aa14.27□□□□□ -0.12
HPS1-202ENST00000338546 FNDC9Q8TBE3 224 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms