RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 EVX1P49640 407 aa13.25□□□□□ -0.29
SEC13-201ENST00000337354 FABP6P51161 128 aa13.25□□□□□ -0.29
SEC13-201ENST00000337354 KRTAP10-9P60411 292 aa13.25□□□□□ -0.29
SEC13-201ENST00000337354 AGAP6Q5VW22 663 aa13.25□□□□□ -0.29
SEC13-201ENST00000337354 KCTD20Q7Z5Y7 419 aa13.25□□□□□ -0.29
SEC13-201ENST00000337354 ZNF101Q8IZC7 436 aa13.25□□□□□ -0.29
SEC13-201ENST00000337354 FBXL14Q8N1E6 418 aa13.25□□□□□ -0.29
SEC13-201ENST00000337354 ACBD7Q8N6N7 88 aa13.25□□□□□ -0.29
SEC13-201ENST00000337354 OR10H4Q8NGA5 316 aa13.25□□□□□ -0.29
SEC13-201ENST00000337354 OR1J1Q8NGS3 322 aa13.25□□□□□ -0.29
SEC13-201ENST00000337354 TMEM171Q8WVE6 324 aa13.25□□□□□ -0.29
SEC13-201ENST00000337354 ZNF799Q96GE5 643 aa13.25□□□□□ -0.29
SEC13-201ENST00000337354 OR8B4Q96RC9 309 aa13.25□□□□□ -0.29
SEC13-201ENST00000337354 C1QTNF5Q9BXJ0 243 aa13.25□□□□□ -0.29
SEC13-201ENST00000337354 UBTD1Q9HAC8 227 aa13.25□□□□□ -0.29
SEC13-201ENST00000337354 INPP5EQ9NRR6 644 aa13.25□□□□□ -0.29
SEC13-201ENST00000337354 FBXO9Q9UK97 447 aaPredicted RBP13.25□□□□□ -0.29
SEC13-201ENST00000337354 COPS3Q9UNS2 423 aa13.25□□□□□ -0.29
SEC13-201ENST00000337354 KLHDC2Q9Y2U9 406 aa13.25□□□□□ -0.29
SEC13-201ENST00000337354 DCHS2Q6V1P9 2916 aa13.25□□□□□ -0.29
SEC13-201ENST00000337354 A0A1W2PQL4 384 aaPredicted RBP13.24□□□□□ -0.29
SEC13-201ENST00000337354 H3BSA7 217 aa13.24□□□□□ -0.29
SEC13-201ENST00000337354 SULT1C4O75897 302 aa13.24□□□□□ -0.29
SEC13-201ENST00000337354 NGFP01138 241 aa13.24□□□□□ -0.29
SEC13-201ENST00000337354 LCKP06239 509 aa13.24□□□□□ -0.29
SEC13-201ENST00000337354 OR4A8P0C604 315 aa13.24□□□□□ -0.29
SEC13-201ENST00000337354 DANCRP0C864 163 aa13.24□□□□□ -0.29
SEC13-201ENST00000337354 BMP4P12644 408 aa13.24□□□□□ -0.29
SEC13-201ENST00000337354 APCP25054 2843 aa13.24□□□□□ -0.29
SEC13-201ENST00000337354 DCKP27707 260 aa13.24□□□□□ -0.29
SEC13-201ENST00000337354 SELENOVP59797 346 aa13.24□□□□□ -0.29
SEC13-201ENST00000337354 ADIPOQQ15848 244 aa13.24□□□□□ -0.29
SEC13-201ENST00000337354 SMN1Q16637 294 aaKnown RBP13.24□□□□□ -0.29
SEC13-201ENST00000337354 ZNF718Q3SXZ3 478 aa13.24□□□□□ -0.29
SEC13-201ENST00000337354 RGS7BPQ6MZT1 257 aaPredicted RBP13.24□□□□□ -0.29
SEC13-201ENST00000337354 VHLLQ6RSH7 139 aa13.24□□□□□ -0.29
SEC13-201ENST00000337354 SPATC1Q76KD6 591 aa13.24□□□□□ -0.29
SEC13-201ENST00000337354 MUC15Q8N387 334 aa13.24□□□□□ -0.29
SEC13-201ENST00000337354 ABHD4Q8TB40 342 aa13.24□□□□□ -0.29
SEC13-201ENST00000337354 MRPL48Q96GC5 212 aaKnown RBP13.24□□□□□ -0.29
SEC13-201ENST00000337354 DAPL1A0PJW8 107 aa13.23□□□□□ -0.29
SEC13-201ENST00000337354 ACOD1A6NK06 481 aa13.23□□□□□ -0.29
SEC13-201ENST00000337354 B9A039 149 aa13.23□□□□□ -0.29
SEC13-201ENST00000337354 DENRO43583 198 aaKnown RBP13.23□□□□□ -0.29
SEC13-201ENST00000337354 APOL3O95236 402 aa13.23□□□□□ -0.29
SEC13-201ENST00000337354 LCATP04180 440 aa13.23□□□□□ -0.29
SEC13-201ENST00000337354 ZNF250P15622 560 aa13.23□□□□□ -0.29
SEC13-201ENST00000337354 SLC6A9P48067 706 aa13.23□□□□□ -0.29
SEC13-201ENST00000337354 PRKXP51817 358 aa13.23□□□□□ -0.29
SEC13-201ENST00000337354 RIDAP52758 137 aaKnown RBP13.23□□□□□ -0.29
SEC13-201ENST00000337354 PPP1CBP62140 327 aa13.23□□□□□ -0.29
SEC13-201ENST00000337354 EFNB3Q15768 340 aa13.23□□□□□ -0.29
SEC13-201ENST00000337354 MOGQ16653 247 aa13.23□□□□□ -0.29
SEC13-201ENST00000337354 C6orf141Q5SZD1 244 aa13.23□□□□□ -0.29
SEC13-201ENST00000337354 LRRN1Q6UXK5 716 aa13.23□□□□□ -0.29
SEC13-201ENST00000337354 PLEKHG7Q6ZR37 379 aa13.23□□□□□ -0.29
SEC13-201ENST00000337354 CDH24Q86UP0 819 aa13.23□□□□□ -0.29
SEC13-201ENST00000337354 ZNF283Q8N7M2 679 aa13.23□□□□□ -0.29
SEC13-201ENST00000337354 SNX33Q8WV41 574 aa13.23□□□□□ -0.29
SEC13-201ENST00000337354 PIGTQ969N2 578 aa13.23□□□□□ -0.29
SEC13-201ENST00000337354 MRPL24Q96A35 216 aaKnown RBP13.23□□□□□ -0.29
SEC13-201ENST00000337354 DOK1Q99704 481 aa13.23□□□□□ -0.29
SEC13-201ENST00000337354 FGF20Q9NP95 211 aaPredicted RBP13.23□□□□□ -0.29
SEC13-201ENST00000337354 CBLN4Q9NTU7 201 aa13.23□□□□□ -0.29
SEC13-201ENST00000337354 SLCO1C1Q9NYB5 712 aa13.23□□□□□ -0.29
SEC13-201ENST00000337354 CNOT2Q9NZN8 540 aaKnown RBP13.23□□□□□ -0.29
SEC13-201ENST00000337354 IKZF2Q9UKS7 526 aa13.23□□□□□ -0.29
SEC13-201ENST00000337354 ANKRD17O75179 2603 aaKnown RBP13.22□□□□□ -0.29
SEC13-201ENST00000337354 EFCAB10A6NFE3 127 aa13.22□□□□□ -0.29
SEC13-201ENST00000337354 GPRIN2O60269 458 aa13.22□□□□□ -0.29
SEC13-201ENST00000337354 IGHA1P01876 353 aa13.22□□□□□ -0.29
SEC13-201ENST00000337354 KRT8P05787 483 aa13.22□□□□□ -0.29
SEC13-201ENST00000337354 TACSTD2P09758 323 aa13.22□□□□□ -0.29
SEC13-201ENST00000337354 PIPP12273 146 aaPredicted RBP13.22□□□□□ -0.29
SEC13-201ENST00000337354 GCH1P30793 250 aa13.22□□□□□ -0.29
SEC13-201ENST00000337354 CX3CR1P49238 355 aa13.22□□□□□ -0.29
SEC13-201ENST00000337354 MALLQ13021 153 aa13.22□□□□□ -0.29
SEC13-201ENST00000337354 MBNL2Q5VZF2 373 aaKnown RBP13.22□□□□□ -0.29
SEC13-201ENST00000337354 LAIR2Q6ISS4 152 aa13.22□□□□□ -0.29
SEC13-201ENST00000337354 RFPL4BQ6ZWI9 263 aa13.22□□□□□ -0.29
SEC13-201ENST00000337354 DTX2Q86UW9 622 aa13.22□□□□□ -0.29
SEC13-201ENST00000337354 BPIFB6Q8NFQ5 453 aa13.22□□□□□ -0.29
SEC13-201ENST00000337354 OR52H1Q8NGJ2 320 aa13.22□□□□□ -0.29
SEC13-201ENST00000337354 OR52I1Q8NGK6 324 aa13.22□□□□□ -0.29
SEC13-201ENST00000337354 SYNPRQ8TBG9 265 aa13.22□□□□□ -0.29
SEC13-201ENST00000337354 SLC25A40Q8TBP6 338 aa13.22□□□□□ -0.29
SEC13-201ENST00000337354 MARS2Q96GW9 593 aaKnown RBP13.22□□□□□ -0.29
SEC13-201ENST00000337354 TBX5Q99593 518 aa13.22□□□□□ -0.29
SEC13-201ENST00000337354 JAM3Q9BX67 310 aa13.22□□□□□ -0.29
SEC13-201ENST00000337354 OR51B6Q9H340 312 aa13.22□□□□□ -0.29
SEC13-201ENST00000337354 PLK3Q9H4B4 646 aa13.22□□□□□ -0.29
SEC13-201ENST00000337354 SCN3BQ9NY72 215 aa13.22□□□□□ -0.29
SEC13-201ENST00000337354 MYRFQ9Y2G1 1151 aa13.22□□□□□ -0.29
SEC13-201ENST00000337354 STARD10Q9Y365 291 aa13.22□□□□□ -0.29
SEC13-201ENST00000337354 LRP12Q9Y561 859 aa13.22□□□□□ -0.29
SEC13-201ENST00000337354 METTL15A6NJ78 407 aa13.21□□□□□ -0.29
SEC13-201ENST00000337354 CCDC159P0C7I6 412 aa13.21□□□□□ -0.29
SEC13-201ENST00000337354 MMP16P51512 607 aa13.21□□□□□ -0.29
SEC13-201ENST00000337354 ACTA2P62736 377 aa13.21□□□□□ -0.29
SEC13-201ENST00000337354 ACTG2P63267 376 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms