RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 AKAP13Q12802 2813 aa11.16□□□□□ -0.62
LIMK1-201ENST00000336180 LOC100509620A0A075B734 347 aa11.15□□□□□ -0.62
LIMK1-201ENST00000336180 A0A0A6YYJ9 748 aa11.15□□□□□ -0.62
LIMK1-201ENST00000336180 A6NIZ1 184 aa11.15□□□□□ -0.62
LIMK1-201ENST00000336180 GPR171O14626 319 aa11.15□□□□□ -0.62
LIMK1-201ENST00000336180 PDCD5O14737 125 aa11.15□□□□□ -0.62
LIMK1-201ENST00000336180 ITGB2P05107 769 aa11.15□□□□□ -0.62
LIMK1-201ENST00000336180 ARSBP15848 533 aa11.15□□□□□ -0.62
LIMK1-201ENST00000336180 HSD11B1P28845 292 aa11.15□□□□□ -0.62
LIMK1-201ENST00000336180 RAP1BP61224 184 aa11.15□□□□□ -0.62
LIMK1-201ENST00000336180 RAP1AP62834 184 aa11.15□□□□□ -0.62
LIMK1-201ENST00000336180 ACBD4Q8NC06 268 aa11.15□□□□□ -0.62
LIMK1-201ENST00000336180 PAQR5Q9NXK6 330 aaPredicted RBP11.15□□□□□ -0.62
LIMK1-201ENST00000336180 NPIPA2E9PIF3 369 aa11.15□□□□□ -0.62
LIMK1-201ENST00000336180 NPIPA3F8WFD2 350 aa11.15□□□□□ -0.62
LIMK1-201ENST00000336180 SULT1B1O43704 296 aa11.15□□□□□ -0.62
LIMK1-201ENST00000336180 UBL3O95164 117 aa11.15□□□□□ -0.62
LIMK1-201ENST00000336180 PTH2RP49190 550 aa11.15□□□□□ -0.62
LIMK1-201ENST00000336180 ART1P52961 327 aa11.15□□□□□ -0.62
LIMK1-201ENST00000336180 SUMO3P55854 103 aaPredicted RBP11.15□□□□□ -0.62
LIMK1-201ENST00000336180 UBE2MP61081 183 aaKnown RBP11.15□□□□□ -0.62
LIMK1-201ENST00000336180 RASGEF1BQ0VAM2 473 aa11.15□□□□□ -0.62
LIMK1-201ENST00000336180 SNTB2Q13425 540 aaKnown RBP11.15□□□□□ -0.62
LIMK1-201ENST00000336180 ZMYND11Q15326 602 aa11.15□□□□□ -0.62
LIMK1-201ENST00000336180 MOGAT2Q3SYC2 334 aa11.15□□□□□ -0.62
LIMK1-201ENST00000336180 ABHD12BQ7Z5M8 362 aaPredicted RBP11.15□□□□□ -0.62
LIMK1-201ENST00000336180 VASH2Q86V25 355 aa11.15□□□□□ -0.62
LIMK1-201ENST00000336180 ZNF227Q86WZ6 799 aa11.15□□□□□ -0.62
LIMK1-201ENST00000336180 BATF2Q8N1L9 274 aa11.15□□□□□ -0.62
LIMK1-201ENST00000336180 ASCC1Q8N9N2 400 aaKnown RBP11.15□□□□□ -0.62
LIMK1-201ENST00000336180 SFXN2Q96NB2 322 aa11.15□□□□□ -0.62
LIMK1-201ENST00000336180 ZNF416Q9BWM5 594 aa11.15□□□□□ -0.62
LIMK1-201ENST00000336180 POTEKPQ9BYX7 375 aa11.15□□□□□ -0.62
LIMK1-201ENST00000336180 ZNF222Q9UK12 451 aa11.15□□□□□ -0.62
LIMK1-201ENST00000336180 CDV3Q9UKY7 258 aaKnown RBP11.15□□□□□ -0.62
LIMK1-201ENST00000336180 SSX5O60225 188 aa11.14□□□□□ -0.63
LIMK1-201ENST00000336180 MT-CO3P00414 261 aa11.14□□□□□ -0.63
LIMK1-201ENST00000336180 ACSM4P0C7M7 580 aa11.14□□□□□ -0.63
LIMK1-201ENST00000336180 MSX1P28360 303 aa11.14□□□□□ -0.63
LIMK1-201ENST00000336180 TAS2R20P59543 309 aa11.14□□□□□ -0.63
LIMK1-201ENST00000336180 FCN2Q15485 313 aa11.14□□□□□ -0.63
LIMK1-201ENST00000336180 DNM1P34Q6PK57 102 aa11.14□□□□□ -0.63
LIMK1-201ENST00000336180 IL22RA1Q8N6P7 574 aa11.14□□□□□ -0.63
LIMK1-201ENST00000336180 UXS1Q8NBZ7 420 aa11.14□□□□□ -0.63
LIMK1-201ENST00000336180 OR2AJ1Q8NGZ0 328 aa11.14□□□□□ -0.63
LIMK1-201ENST00000336180 SVIPQ8NHG7 77 aa11.14□□□□□ -0.63
LIMK1-201ENST00000336180 PAQR8Q8TEZ7 354 aa11.14□□□□□ -0.63
LIMK1-201ENST00000336180 S100A16Q96FQ6 103 aaKnown RBP11.14□□□□□ -0.63
LIMK1-201ENST00000336180 MRPL13Q9BYD1 178 aaKnown RBP11.14□□□□□ -0.63
LIMK1-201ENST00000336180 LRFN1Q9P244 771 aa11.14□□□□□ -0.63
LIMK1-201ENST00000336180 R4GMQ9 66 aa11.14□□□□□ -0.63
LIMK1-201ENST00000336180 TRBV5-7A0A0A0MS05 114 aa11.14□□□□□ -0.63
LIMK1-201ENST00000336180 NDUFA2O43678 99 aa11.14□□□□□ -0.63
LIMK1-201ENST00000336180 TMPRSS7Q7RTY8 843 aa11.14□□□□□ -0.63
LIMK1-201ENST00000336180 ZNF283Q8N7M2 679 aa11.14□□□□□ -0.63
LIMK1-201ENST00000336180 DEFB124Q8NES8 71 aa11.14□□□□□ -0.63
LIMK1-201ENST00000336180 OR52N4Q8NGI2 321 aa11.14□□□□□ -0.63
LIMK1-201ENST00000336180 RPS4Y2Q8TD47 263 aa11.14□□□□□ -0.63
LIMK1-201ENST00000336180 ABHD3Q8WU67 409 aa11.14□□□□□ -0.63
LIMK1-201ENST00000336180 OIT3Q8WWZ8 545 aa11.14□□□□□ -0.63
LIMK1-201ENST00000336180 FAM3DQ96BQ1 224 aa11.14□□□□□ -0.63
LIMK1-201ENST00000336180 ANGPTL4Q9BY76 406 aa11.14□□□□□ -0.63
LIMK1-201ENST00000336180 ZC4H2Q9NQZ6 224 aa11.14□□□□□ -0.63
LIMK1-201ENST00000336180 DMXL2Q8TDJ6 3036 aa11.14□□□□□ -0.63
LIMK1-201ENST00000336180 TSC22D2O75157 780 aa11.14□□□□□ -0.63
LIMK1-201ENST00000336180 TOXO94900 526 aa11.14□□□□□ -0.63
LIMK1-201ENST00000336180 ONECUT2O95948 504 aa11.14□□□□□ -0.63
LIMK1-201ENST00000336180 IGHMP01871 453 aa11.14□□□□□ -0.63
LIMK1-201ENST00000336180 TTRP02766 147 aa11.14□□□□□ -0.63
LIMK1-201ENST00000336180 LIPCP11150 499 aa11.14□□□□□ -0.63
LIMK1-201ENST00000336180 ZNF121P58317 390 aaPredicted RBP11.14□□□□□ -0.63
LIMK1-201ENST00000336180 KLHL24Q6TFL4 600 aa11.14□□□□□ -0.63
LIMK1-201ENST00000336180 OR4D6Q8NGJ1 314 aa11.14□□□□□ -0.63
LIMK1-201ENST00000336180 M1APQ8TC57 530 aa11.14□□□□□ -0.63
LIMK1-201ENST00000336180 PSMF1Q92530 271 aa11.14□□□□□ -0.63
LIMK1-201ENST00000336180 PBOV1Q9GZY1 135 aa11.14□□□□□ -0.63
LIMK1-201ENST00000336180 MOV10Q9HCE1 1003 aaKnown RBP11.14□□□□□ -0.63
LIMK1-201ENST00000336180 ARID1AO14497 2285 aa11.14□□□□□ -0.63
LIMK1-201ENST00000336180 A0A1W2PP11 408 aa11.13□□□□□ -0.63
LIMK1-201ENST00000336180 SYT7O43581 403 aa11.13□□□□□ -0.63
LIMK1-201ENST00000336180 PLATP00750 562 aa11.13□□□□□ -0.63
LIMK1-201ENST00000336180 TCRBP04435 133 aa11.13□□□□□ -0.63
LIMK1-201ENST00000336180 SLC6A1P30531 599 aa11.13□□□□□ -0.63
LIMK1-201ENST00000336180 CD96P40200 585 aa11.13□□□□□ -0.63
LIMK1-201ENST00000336180 CAPZA2P47755 286 aa11.13□□□□□ -0.63
LIMK1-201ENST00000336180 RELQ04864 619 aaPredicted RBP11.13□□□□□ -0.63
LIMK1-201ENST00000336180 ZP4Q12836 540 aa11.13□□□□□ -0.63
LIMK1-201ENST00000336180 MFSD13AQ14CX5 517 aa11.13□□□□□ -0.63
LIMK1-201ENST00000336180 CCDC36Q8IYA8 594 aa11.13□□□□□ -0.63
LIMK1-201ENST00000336180 RNF138Q8WVD3 245 aa11.13□□□□□ -0.63
LIMK1-201ENST00000336180 ASB17Q8WXJ9 295 aa11.13□□□□□ -0.63
LIMK1-201ENST00000336180 MIB2Q96AX9 1013 aa11.13□□□□□ -0.63
LIMK1-201ENST00000336180 OXGR1Q96P68 337 aa11.13□□□□□ -0.63
LIMK1-201ENST00000336180 TAAR9Q96RI9 348 aa11.13□□□□□ -0.63
LIMK1-201ENST00000336180 CHIAQ9BZP6 476 aa11.13□□□□□ -0.63
LIMK1-201ENST00000336180 C1orf198Q9H425 327 aa11.13□□□□□ -0.63
LIMK1-201ENST00000336180 CAMK2AQ9UQM7 478 aa11.13□□□□□ -0.63
LIMK1-201ENST00000336180 FAM172BPA6NC97 362 aa11.13□□□□□ -0.63
LIMK1-201ENST00000336180 AKR7A2O43488 359 aa11.13□□□□□ -0.63
LIMK1-201ENST00000336180 CALCBP10092 127 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms