RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 CYB5R1Q9UHQ9 305 aa14.42□□□□□ -0.1
PDLIM1-201ENST00000329399 FOXD3Q9UJU5 478 aaPredicted RBP14.42□□□□□ -0.1
PDLIM1-201ENST00000329399 SIRT4Q9Y6E7 314 aaPredicted RBP14.42□□□□□ -0.1
PDLIM1-201ENST00000329399 ZNF724A8MTY0 619 aa14.41□□□□□ -0.1
PDLIM1-201ENST00000329399 ZNF879B4DU55 563 aa14.41□□□□□ -0.1
PDLIM1-201ENST00000329399 CLDN25C9JDP6 229 aa14.41□□□□□ -0.1
PDLIM1-201ENST00000329399 CDRT1O95170 752 aa14.41□□□□□ -0.1
PDLIM1-201ENST00000329399 RAF1P04049 648 aa14.41□□□□□ -0.1
PDLIM1-201ENST00000329399 AGTR1P30556 359 aa14.41□□□□□ -0.1
PDLIM1-201ENST00000329399 KIR2DL3P43628 341 aa14.41□□□□□ -0.1
PDLIM1-201ENST00000329399 TLE4Q04727 773 aa14.41□□□□□ -0.1
PDLIM1-201ENST00000329399 ZNF846Q147U1 533 aa14.41□□□□□ -0.1
PDLIM1-201ENST00000329399 NRN1LQ496H8 165 aa14.41□□□□□ -0.1
PDLIM1-201ENST00000329399 ACSM3Q53FZ2 586 aa14.41□□□□□ -0.1
PDLIM1-201ENST00000329399 LRFN4Q6PJG9 635 aa14.41□□□□□ -0.1
PDLIM1-201ENST00000329399 UNQ9370/PRO34162Q6UXP9 181 aa14.41□□□□□ -0.1
PDLIM1-201ENST00000329399 TMEM91Q6ZNR0 172 aa14.41□□□□□ -0.1
PDLIM1-201ENST00000329399 RFLNBQ8N5W9 214 aa14.41□□□□□ -0.1
PDLIM1-201ENST00000329399 OR5AK2Q8NH90 309 aa14.41□□□□□ -0.1
PDLIM1-201ENST00000329399 SMAP2Q8WU79 429 aaPredicted RBP14.41□□□□□ -0.1
PDLIM1-201ENST00000329399 RNF133Q8WVZ7 376 aa14.41□□□□□ -0.1
PDLIM1-201ENST00000329399 C11orf40Q8WZ69 217 aa14.41□□□□□ -0.1
PDLIM1-201ENST00000329399 BORCS5Q969J3 196 aa14.41□□□□□ -0.1
PDLIM1-201ENST00000329399 ABHD6Q9BV23 337 aa14.41□□□□□ -0.1
PDLIM1-201ENST00000329399 C12orf49Q9H741 205 aa14.41□□□□□ -0.1
PDLIM1-201ENST00000329399 ELOVL3Q9HB03 270 aa14.41□□□□□ -0.1
PDLIM1-201ENST00000329399 ANKRD61A6NGH8 418 aa14.4□□□□□ -0.1
PDLIM1-201ENST00000329399 CASKO14936 926 aa14.4□□□□□ -0.1
PDLIM1-201ENST00000329399 DHHO43323 396 aa14.4□□□□□ -0.1
PDLIM1-201ENST00000329399 INHBBP09529 407 aa14.4□□□□□ -0.1
PDLIM1-201ENST00000329399 OR8G3PP0DMU2 310 aa14.4□□□□□ -0.1
PDLIM1-201ENST00000329399 CD8BP10966 210 aa14.4□□□□□ -0.1
PDLIM1-201ENST00000329399 FCGR2AP12318 317 aa14.4□□□□□ -0.1
PDLIM1-201ENST00000329399 CCKARP32238 428 aa14.4□□□□□ -0.1
PDLIM1-201ENST00000329399 FMODQ06828 376 aa14.4□□□□□ -0.1
PDLIM1-201ENST00000329399 MEP1BQ16820 701 aa14.4□□□□□ -0.1
PDLIM1-201ENST00000329399 AAED1Q7RTV5 226 aa14.4□□□□□ -0.1
PDLIM1-201ENST00000329399 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.4□□□□□ -0.1
PDLIM1-201ENST00000329399 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.4□□□□□ -0.1
PDLIM1-201ENST00000329399 ST7LQ8TDW4 575 aa14.4□□□□□ -0.1
PDLIM1-201ENST00000329399 ACOT12Q8WYK0 555 aa14.4□□□□□ -0.1
PDLIM1-201ENST00000329399 KCTD12Q96CX2 325 aaKnown RBP14.4□□□□□ -0.1
PDLIM1-201ENST00000329399 TRMT61AQ96FX7 289 aaKnown RBP14.4□□□□□ -0.1
PDLIM1-201ENST00000329399 LINC00470Q9BZP3 86 aa14.4□□□□□ -0.1
PDLIM1-201ENST00000329399 NELFAQ9H3P2 528 aa14.4□□□□□ -0.1
PDLIM1-201ENST00000329399 ANKRD17O75179 2603 aaKnown RBP14.39□□□□□ -0.11
PDLIM1-201ENST00000329399 ACOD1A6NK06 481 aa14.39□□□□□ -0.11
PDLIM1-201ENST00000329399 UCHL1P09936 223 aa14.39□□□□□ -0.11
PDLIM1-201ENST00000329399 MSR1P21757 451 aa14.39□□□□□ -0.11
PDLIM1-201ENST00000329399 SDC2P34741 201 aa14.39□□□□□ -0.11
PDLIM1-201ENST00000329399 MRPS34P82930 218 aaKnown RBP14.39□□□□□ -0.11
PDLIM1-201ENST00000329399 ZNF45Q02386 682 aa14.39□□□□□ -0.11
PDLIM1-201ENST00000329399 CEACAM19Q7Z692 300 aa14.39□□□□□ -0.11
PDLIM1-201ENST00000329399 OR2G2Q8NGZ5 317 aa14.39□□□□□ -0.11
PDLIM1-201ENST00000329399 NRGNQ92686 78 aa14.39□□□□□ -0.11
PDLIM1-201ENST00000329399 C14orf79Q96F83 325 aa14.39□□□□□ -0.11
PDLIM1-201ENST00000329399 ZNF385AQ96PM9 386 aaKnown RBP14.39□□□□□ -0.11
PDLIM1-201ENST00000329399 ULBP2Q9BZM5 246 aa14.39□□□□□ -0.11
PDLIM1-201ENST00000329399 RNF167Q9H6Y7 350 aa14.39□□□□□ -0.11
PDLIM1-201ENST00000329399 MOB1AQ9H8S9 216 aa14.39□□□□□ -0.11
PDLIM1-201ENST00000329399 SEC61A2Q9H9S3 476 aa14.39□□□□□ -0.11
PDLIM1-201ENST00000329399 BCO1Q9HAY6 547 aa14.39□□□□□ -0.11
PDLIM1-201ENST00000329399 POLE4Q9NR33 117 aa14.39□□□□□ -0.11
PDLIM1-201ENST00000329399 GLRX2Q9NS18 164 aa14.39□□□□□ -0.11
PDLIM1-201ENST00000329399 SNTG1Q9NSN8 517 aa14.39□□□□□ -0.11
PDLIM1-201ENST00000329399 SLCO1C1Q9NYB5 712 aa14.39□□□□□ -0.11
PDLIM1-201ENST00000329399 PROCRQ9UNN8 238 aa14.39□□□□□ -0.11
PDLIM1-201ENST00000329399 KLHDC2Q9Y2U9 406 aa14.39□□□□□ -0.11
PDLIM1-201ENST00000329399 PMF1-BGLAPU3KQ54 211 aa14.39□□□□□ -0.11
PDLIM1-201ENST00000329399 IGKV1D-43A0A0B4J1Z2 117 aa14.38□□□□□ -0.11
PDLIM1-201ENST00000329399 A0A1W2PPL8 197 aa14.38□□□□□ -0.11
PDLIM1-201ENST00000329399 APOC1P02654 83 aa14.38□□□□□ -0.11
PDLIM1-201ENST00000329399 TGFBR1P36897 503 aa14.38□□□□□ -0.11
PDLIM1-201ENST00000329399 MMP16P51512 607 aa14.38□□□□□ -0.11
PDLIM1-201ENST00000329399 PSMD7P51665 324 aa14.38□□□□□ -0.11
PDLIM1-201ENST00000329399 ZMAT1Q5H9K5 638 aa14.38□□□□□ -0.11
PDLIM1-201ENST00000329399 CARD17Q5XLA6 110 aa14.38□□□□□ -0.11
PDLIM1-201ENST00000329399 MZT2AQ6P582 158 aa14.38□□□□□ -0.11
PDLIM1-201ENST00000329399 DCXRQ7Z4W1 244 aa14.38□□□□□ -0.11
PDLIM1-201ENST00000329399 SYT9Q86SS6 491 aa14.38□□□□□ -0.11
PDLIM1-201ENST00000329399 GPR137CQ8N3F9 429 aa14.38□□□□□ -0.11
PDLIM1-201ENST00000329399 OR6K3Q8NGY3 331 aa14.38□□□□□ -0.11
PDLIM1-201ENST00000329399 WFIKKN1Q96NZ8 548 aa14.38□□□□□ -0.11
PDLIM1-201ENST00000329399 KCNN3Q9UGI6 736 aa14.38□□□□□ -0.11
PDLIM1-201ENST00000329399 POLR1DQ9Y2S0 133 aa14.38□□□□□ -0.11
PDLIM1-201ENST00000329399 EMC9Q9Y3B6 208 aa14.38□□□□□ -0.11
PDLIM1-201ENST00000329399 R4GMQ9 66 aa14.38□□□□□ -0.11
PDLIM1-201ENST00000329399 TUBAL3A6NHL2 446 aa14.38□□□□□ -0.11
PDLIM1-201ENST00000329399 ZNF878C9JN71 531 aa14.38□□□□□ -0.11
PDLIM1-201ENST00000329399 PDCD5O14737 125 aa14.38□□□□□ -0.11
PDLIM1-201ENST00000329399 YES1P07947 543 aa14.38□□□□□ -0.11
PDLIM1-201ENST00000329399 H2BFMP0C1H6 154 aa14.38□□□□□ -0.11
PDLIM1-201ENST00000329399 CD40LGP29965 261 aa14.38□□□□□ -0.11
PDLIM1-201ENST00000329399 ETV6P41212 452 aa14.38□□□□□ -0.11
PDLIM1-201ENST00000329399 BMXP51813 675 aa14.38□□□□□ -0.11
PDLIM1-201ENST00000329399 GRB2P62993 217 aaKnown RBP14.38□□□□□ -0.11
PDLIM1-201ENST00000329399 DBPQ10586 325 aaPredicted RBP14.38□□□□□ -0.11
PDLIM1-201ENST00000329399 TSC22D1Q15714 1073 aa14.38□□□□□ -0.11
PDLIM1-201ENST00000329399 Q499Y3 187 aa14.38□□□□□ -0.11
PDLIM1-201ENST00000329399 KLHL24Q6TFL4 600 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms