RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 SYT7O43581 403 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 CSN2P05814 226 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 HOXB5P09067 269 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 NQO2P16083 231 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 HIST1H1BP16401 226 aaKnown RBP4.29□□□□□ -1.72
PTPN13-201ENST00000316707 PGCP20142 388 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 HOXA5P20719 270 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 NFYBP25208 207 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 CTGFP29279 349 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 GALNSP34059 522 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 ACTR1BP42025 376 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 ACTR1AP61163 376 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 DCAF7P61962 342 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 IGLV3-21P80748 117 aaPredicted RBP4.29□□□□□ -1.72
PTPN13-201ENST00000316707 IL15RAQ13261 267 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 OR2B11Q5JQS5 317 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 TMEM268Q5VZI3 342 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 BEND4Q6ZU67 534 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 DEFB128Q7Z7B8 93 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 LRRC18Q8N456 261 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 ZNF615Q8N8J6 731 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 OR10H5Q8NGA6 315 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 OR5D14Q8NGL3 314 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 S100PBPQ96BU1 408 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 SCARF2Q96GP6 870 aaPredicted RBP4.29□□□□□ -1.72
PTPN13-201ENST00000316707 SLC46A1Q96NT5 459 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 ABHD6Q9BV23 337 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 MOB1AQ9H8S9 216 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 KLHDC2Q9Y2U9 406 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 TMEM184BQ9Y519 407 aaPredicted RBP4.29□□□□□ -1.72
PTPN13-201ENST00000316707 IGKV1D-42A0A075B6H8 117 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 UMAD1C9J7I0 102 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 H0YIZ8 118 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 TNFRSF10CO14798 259 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 CCL16O15467 120 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 HSPA12AO43301 675 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 SLC16A7O60669 478 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 CBR1P16152 277 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 FCARP24071 287 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 CCR2P41597 374 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 LPAR6P43657 344 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 RPL7L1Q6DKI1 246 aaKnown RBP4.29□□□□□ -1.72
PTPN13-201ENST00000316707 CLEC18BQ6UXF7 455 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 SLC26A1Q9H2B4 701 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 FN3KRPQ9HA64 309 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 FBRSQ9HAH7 460 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 CAPN10Q9HC96 672 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 TAS2R4Q9NYW5 299 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 OR52A1Q9UKL2 312 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 KLK13Q9UKR3 277 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 SLC22A13Q9Y226 551 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 PIGBOS1A0A0B4J2F0 54 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 SCDO00767 359 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 IFNA2P01563 188 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 NME2P22392 152 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 CHATP28329 748 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 S100A10P60903 97 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 SPOCK1Q08629 439 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 MESTQ5EB52 335 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 ZNF776Q68DI1 518 aaPredicted RBP4.29□□□□□ -1.72
PTPN13-201ENST00000316707 SLC22A25Q6T423 547 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 POC1AQ8NBT0 407 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 MARCH1Q8TCQ1 289 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 LURAP1Q96LR2 239 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 TSPAN32Q96QS1 320 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 LAT2Q9GZY6 243 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 OBP2AQ9NY56 170 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 FLVCR1Q9Y5Y0 555 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 E5RGE8 158 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 MOSPD3O75425 235 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 HRH1P35367 487 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 TM4SF4P48230 202 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 SULT1A1P50225 295 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 CLDN6P56747 220 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 ARFRP1Q13795 201 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 CST6Q15828 149 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 ODF4Q2M2E3 257 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 ACBD4Q8NC06 268 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 CCDC54Q8NEL0 328 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 M1APQ8TC57 530 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 RAB24Q969Q5 203 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 VSX1Q9NZR4 365 aaPredicted RBP4.28□□□□□ -1.72
PTPN13-201ENST00000316707 CXXC1Q9P0U4 656 aaPredicted RBP4.28□□□□□ -1.72
PTPN13-201ENST00000316707 NSG2Q9Y328 171 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 ZNF860A6NHJ4 632 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 ICOSLGO75144 302 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 APBB3O95704 486 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 F13BP05160 661 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 ACKR3P25106 362 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 GNALP38405 381 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 RAB32Q13637 225 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 EIF2B1Q14232 305 aaKnown RBP4.28□□□□□ -1.72
PTPN13-201ENST00000316707 LHX8Q68G74 356 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 DCXRQ7Z4W1 244 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 ZNF101Q8IZC7 436 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 OR4S1Q8NGB4 309 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 BAHD1Q8TBE0 780 aaPredicted RBP4.28□□□□□ -1.72
PTPN13-201ENST00000316707 NTNG2Q96CW9 530 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 ANAPC10Q9UM13 185 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 PLXNB2O15031 1838 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms