RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 MT-ND5P03915 603 aa12.34□□□□□ -0.43
PPP1CA-201ENST00000312989 GYPBP06028 91 aa12.34□□□□□ -0.43
PPP1CA-201ENST00000312989 SPI1P17947 270 aa12.34□□□□□ -0.43
PPP1CA-201ENST00000312989 GSTM3P21266 225 aa12.34□□□□□ -0.43
PPP1CA-201ENST00000312989 RGS6P49758 472 aa12.34□□□□□ -0.43
PPP1CA-201ENST00000312989 DVL1P1P54792 670 aaPredicted RBP12.34□□□□□ -0.43
PPP1CA-201ENST00000312989 PRSS12P56730 875 aa12.34□□□□□ -0.43
PPP1CA-201ENST00000312989 SLC36A3Q495N2 470 aa12.34□□□□□ -0.43
PPP1CA-201ENST00000312989 IQCF1Q8N6M8 205 aa12.34□□□□□ -0.43
PPP1CA-201ENST00000312989 OR2T33Q8NG76 320 aa12.34□□□□□ -0.43
PPP1CA-201ENST00000312989 PTP4A1Q93096 173 aa12.34□□□□□ -0.43
PPP1CA-201ENST00000312989 APOBEC3DQ96AK3 386 aaPredicted RBP12.34□□□□□ -0.43
PPP1CA-201ENST00000312989 LRGUKQ96M69 825 aa12.34□□□□□ -0.43
PPP1CA-201ENST00000312989 SIGLEC11Q96RL6 698 aa12.34□□□□□ -0.43
PPP1CA-201ENST00000312989 ATF6BQ99941 703 aa12.34□□□□□ -0.43
PPP1CA-201ENST00000312989 CMC2Q9NRP2 79 aa12.34□□□□□ -0.43
PPP1CA-201ENST00000312989 PTTG3PQ9NZH4 202 aa12.34□□□□□ -0.43
PPP1CA-201ENST00000312989 LPAR3Q9UBY5 353 aa12.34□□□□□ -0.43
PPP1CA-201ENST00000312989 KCNG2Q9UJ96 466 aa12.34□□□□□ -0.43
PPP1CA-201ENST00000312989 PLSCR5A0PG75 271 aa12.33□□□□□ -0.44
PPP1CA-201ENST00000312989 MLNRO43193 412 aa12.33□□□□□ -0.44
PPP1CA-201ENST00000312989 TIMM8AO60220 97 aaPredicted RBP12.33□□□□□ -0.44
PPP1CA-201ENST00000312989 DNAJC8O75937 253 aaPredicted RBP12.33□□□□□ -0.44
PPP1CA-201ENST00000312989 MVKQ03426 396 aa12.33□□□□□ -0.44
PPP1CA-201ENST00000312989 OR2T2Q6IF00 324 aa12.33□□□□□ -0.44
PPP1CA-201ENST00000312989 ACSM5Q6NUN0 579 aa12.33□□□□□ -0.44
PPP1CA-201ENST00000312989 ZNF511Q8NB15 262 aa12.33□□□□□ -0.44
PPP1CA-201ENST00000312989 PROKR2Q8NFJ6 384 aa12.33□□□□□ -0.44
PPP1CA-201ENST00000312989 OR2T4Q8NH00 348 aa12.33□□□□□ -0.44
PPP1CA-201ENST00000312989 ST7LQ8TDW4 575 aa12.33□□□□□ -0.44
PPP1CA-201ENST00000312989 GIPC3Q8TF64 312 aa12.33□□□□□ -0.44
PPP1CA-201ENST00000312989 ELMOD3Q96FG2 381 aa12.33□□□□□ -0.44
PPP1CA-201ENST00000312989 DIRC2Q96SL1 478 aa12.33□□□□□ -0.44
PPP1CA-201ENST00000312989 DECR2Q9NUI1 292 aa12.33□□□□□ -0.44
PPP1CA-201ENST00000312989 BAIAP2Q9UQB8 552 aa12.33□□□□□ -0.44
PPP1CA-201ENST00000312989 IQCF6A8MYZ5 107 aa12.32□□□□□ -0.44
PPP1CA-201ENST00000312989 B4DSR2 109 aa12.32□□□□□ -0.44
PPP1CA-201ENST00000312989 CLDN25C9JDP6 229 aa12.32□□□□□ -0.44
PPP1CA-201ENST00000312989 FKBP6O75344 327 aa12.32□□□□□ -0.44
PPP1CA-201ENST00000312989 IGHV2-5P01817 119 aa12.32□□□□□ -0.44
PPP1CA-201ENST00000312989 GRK5P34947 590 aa12.32□□□□□ -0.44
PPP1CA-201ENST00000312989 TNFAIP6P98066 277 aaPredicted RBP12.32□□□□□ -0.44
PPP1CA-201ENST00000312989 FLOT2Q14254 428 aa12.32□□□□□ -0.44
PPP1CA-201ENST00000312989 GK2Q14410 553 aaPredicted RBP12.32□□□□□ -0.44
PPP1CA-201ENST00000312989 SNAI3Q3KNW1 292 aa12.32□□□□□ -0.44
PPP1CA-201ENST00000312989 TEX30Q5JUR7 227 aa12.32□□□□□ -0.44
PPP1CA-201ENST00000312989 C1orf229Q6ZS94 237 aaPredicted RBP12.32□□□□□ -0.44
PPP1CA-201ENST00000312989 OR5AS1Q8N127 324 aa12.32□□□□□ -0.44
PPP1CA-201ENST00000312989 ZNF283Q8N7M2 679 aa12.32□□□□□ -0.44
PPP1CA-201ENST00000312989 CCL17Q92583 94 aa12.32□□□□□ -0.44
PPP1CA-201ENST00000312989 UTP4Q969X6 686 aaKnown RBP12.32□□□□□ -0.44
PPP1CA-201ENST00000312989 COG8Q96MW5 612 aa12.32□□□□□ -0.44
PPP1CA-201ENST00000312989 PITX2Q99697 317 aa12.32□□□□□ -0.44
PPP1CA-201ENST00000312989 SLC30A2Q9BRI3 323 aa12.32□□□□□ -0.44
PPP1CA-201ENST00000312989 BEX2Q9BXY8 128 aa12.32□□□□□ -0.44
PPP1CA-201ENST00000312989 SHARPINQ9H0F6 387 aa12.32□□□□□ -0.44
PPP1CA-201ENST00000312989 ZNF665Q9H7R5 613 aa12.32□□□□□ -0.44
PPP1CA-201ENST00000312989 MED20Q9H944 212 aa12.32□□□□□ -0.44
PPP1CA-201ENST00000312989 MARCH7Q9H992 704 aa12.32□□□□□ -0.44
PPP1CA-201ENST00000312989 G6PC2Q9NQR9 355 aa12.32□□□□□ -0.44
PPP1CA-201ENST00000312989 PDP1Q9P0J1 537 aaPredicted RBP12.32□□□□□ -0.44
PPP1CA-201ENST00000312989 FAM183AA6NL82 134 aa12.31□□□□□ -0.44
PPP1CA-201ENST00000312989 F5H5K5 113 aa12.31□□□□□ -0.44
PPP1CA-201ENST00000312989 H0YL77 283 aa12.31□□□□□ -0.44
PPP1CA-201ENST00000312989 IGHV2-70P01814 119 aa12.31□□□□□ -0.44
PPP1CA-201ENST00000312989 MSMBP08118 114 aa12.31□□□□□ -0.44
PPP1CA-201ENST00000312989 PRKACGP22612 351 aa12.31□□□□□ -0.44
PPP1CA-201ENST00000312989 THBS2P35442 1172 aa12.31□□□□□ -0.44
PPP1CA-201ENST00000312989 CBX1P83916 185 aa12.31□□□□□ -0.44
PPP1CA-201ENST00000312989 ECH1Q13011 328 aa12.31□□□□□ -0.44
PPP1CA-201ENST00000312989 HFEQ30201 348 aa12.31□□□□□ -0.44
PPP1CA-201ENST00000312989 ZMAT1Q5H9K5 638 aa12.31□□□□□ -0.44
PPP1CA-201ENST00000312989 DCXRQ7Z4W1 244 aa12.31□□□□□ -0.44
PPP1CA-201ENST00000312989 SPATA24Q86W54 205 aa12.31□□□□□ -0.44
PPP1CA-201ENST00000312989 OR8G5Q8NG78 346 aa12.31□□□□□ -0.44
PPP1CA-201ENST00000312989 OR2Z1Q8NG97 314 aa12.31□□□□□ -0.44
PPP1CA-201ENST00000312989 ITLN1Q8WWA0 313 aa12.31□□□□□ -0.44
PPP1CA-201ENST00000312989 TMEM186Q96B77 213 aa12.31□□□□□ -0.44
PPP1CA-201ENST00000312989 AMELYQ99218 206 aa12.31□□□□□ -0.44
PPP1CA-201ENST00000312989 TMEM106BQ9NUM4 274 aa12.31□□□□□ -0.44
PPP1CA-201ENST00000312989 IL19Q9UHD0 177 aa12.31□□□□□ -0.44
PPP1CA-201ENST00000312989 M0R135 149 aa12.3□□□□□ -0.44
PPP1CA-201ENST00000312989 AVPP01185 164 aa12.3□□□□□ -0.44
PPP1CA-201ENST00000312989 HLA-DQA2P01906 255 aa12.3□□□□□ -0.44
PPP1CA-201ENST00000312989 ENTPD1P49961 510 aa12.3□□□□□ -0.44
PPP1CA-201ENST00000312989 MMP16P51512 607 aa12.3□□□□□ -0.44
PPP1CA-201ENST00000312989 CDK5Q00535 292 aa12.3□□□□□ -0.44
PPP1CA-201ENST00000312989 CXXC5Q7LFL8 322 aaKnown RBP12.3□□□□□ -0.44
PPP1CA-201ENST00000312989 TIGD4Q8IY51 512 aa12.3□□□□□ -0.44
PPP1CA-201ENST00000312989 OR10AD1Q8NGE0 317 aa12.3□□□□□ -0.44
PPP1CA-201ENST00000312989 OR2AJ1Q8NGZ0 328 aa12.3□□□□□ -0.44
PPP1CA-201ENST00000312989 ZNF799Q96GE5 643 aa12.3□□□□□ -0.44
PPP1CA-201ENST00000312989 OR2V2Q96R30 315 aa12.3□□□□□ -0.44
PPP1CA-201ENST00000312989 EGLN1Q9GZT9 426 aa12.3□□□□□ -0.44
PPP1CA-201ENST00000312989 LPAR2Q9HBW0 351 aa12.3□□□□□ -0.44
PPP1CA-201ENST00000312989 DNAJB9Q9UBS3 223 aa12.3□□□□□ -0.44
PPP1CA-201ENST00000312989 TMEFF2Q9UIK5 374 aaPredicted RBP12.3□□□□□ -0.44
PPP1CA-201ENST00000312989 TANC2Q9HCD6 1990 aa12.3□□□□□ -0.44
PPP1CA-201ENST00000312989 SURF4O15260 269 aa12.3□□□□□ -0.44
PPP1CA-201ENST00000312989 TPD52L2O43399 206 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms