RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 ZNRF4Q8WWF5 429 aa7.46□□□□□ -1.21
VPS41-202ENST00000310301 PDLIM5Q96HC4 596 aaKnown RBP7.46□□□□□ -1.21
VPS41-202ENST00000310301 TEX37Q96LM6 180 aa7.46□□□□□ -1.21
VPS41-202ENST00000310301 LYSMD1Q96S90 227 aa7.46□□□□□ -1.21
VPS41-202ENST00000310301 CHST8Q9H2A9 424 aa7.46□□□□□ -1.21
VPS41-202ENST00000310301 ZNF236Q9UL36 1845 aa7.46□□□□□ -1.21
VPS41-202ENST00000310301 B3GALT5Q9Y2C3 310 aa7.46□□□□□ -1.21
VPS41-202ENST00000310301 MMACHCQ9Y4U1 282 aa7.46□□□□□ -1.21
VPS41-202ENST00000310301 ZNF320A2RRD8 509 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 ANKRD61A6NGH8 418 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 CHEK1O14757 476 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 CT45A6P0DMU7 189 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 CT45A5P0DMU8 189 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 CT45A7P0DMV0 189 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 CT45A8P0DMV1 189 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 CT45A9P0DMV2 189 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 RPL12P30050 165 aaKnown RBP7.46□□□□□ -1.22
VPS41-202ENST00000310301 RGRP47804 291 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 CTSCP53634 463 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 CCL7P80098 99 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 REEP5Q00765 189 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.46□□□□□ -1.22
VPS41-202ENST00000310301 GGTA1PQ4G0N0 100 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 SYT14P1Q58G82 188 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 CT45A2Q5DJT8 189 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 CT45A1Q5HYN5 189 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 PAQR6Q6TCH4 344 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 Q6ZSR9 355 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 LANCL3Q6ZV70 420 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 SLC16A13Q7RTY0 426 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 LINC00346Q8IVM7 164 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 GABRG1Q8N1C3 465 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 KDF1Q8NAX2 398 aaPredicted RBP7.46□□□□□ -1.22
VPS41-202ENST00000310301 OR6K3Q8NGY3 331 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 CT45A3Q8NHU0 189 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 FBXW5Q969U6 566 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 ZNF845Q96IR2 970 aaPredicted RBP7.46□□□□□ -1.22
VPS41-202ENST00000310301 ZDHHC11Q9H8X9 412 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 RHOFQ9HBH0 211 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 OBP2BQ9NPH6 170 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 UBQLN4Q9NRR5 601 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 A0A1B0GUH1 482 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 RAB27BO00194 218 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 FOXE1O00358 373 aaPredicted RBP7.46□□□□□ -1.22
VPS41-202ENST00000310301 BCL2L11O43521 198 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 SUSD5O60279 629 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 AIFM1O95831 613 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 GLAP06280 429 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 ZNF883P0CG24 379 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 FPR3P25089 353 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 CAPZBP47756 277 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 HTR5AP47898 357 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 CATSPERDQ86XM0 798 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 CMTM2Q8TAZ6 248 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 MZB1Q8WU39 189 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 SMIM14Q96QK8 99 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 ENKD1Q9H0I2 346 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 LAMP3Q9UQV4 416 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 POMT1Q9Y6A1 747 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 TTC3P53804 2025 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 A0A1W2PPQ1 181 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 TARM1B6A8C7 271 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 CD1EP15812 388 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 HOXA6P31267 233 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 KIR2DL1P43626 348 aaPredicted RBP7.46□□□□□ -1.22
VPS41-202ENST00000310301 OR1D4P47884 311 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 EVX1P49640 407 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 AQP6Q13520 282 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 SLC17A1Q14916 467 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 IQCJQ1A5X6 159 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 NKAIN2Q5VXU1 208 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 ANGPTL5Q86XS5 388 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 LSMEM1Q8N8F7 131 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 ZNF511Q8NB15 262 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 WBP2Q969T9 261 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 SLCO4A1Q96BD0 722 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 GNPNAT1Q96EK6 184 aaPredicted RBP7.46□□□□□ -1.22
VPS41-202ENST00000310301 PRR14Q9BWN1 585 aa7.46□□□□□ -1.22
VPS41-202ENST00000310301 ZC3H12DA2A288 527 aaKnown RBP7.45□□□□□ -1.22
VPS41-202ENST00000310301 GPR171O14626 319 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 MMP11P24347 488 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 PAX6P26367 422 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 GABRA4P48169 554 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 PCBD1P61457 104 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 NKAIN1Q4KMZ8 207 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 SLC23A3Q6PIS1 610 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 TOMM20LQ6UXN7 152 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 DPY19L2P2Q6ZN68 376 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 ZNF595Q8IYB9 648 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 MFSD4AQ8N468 514 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 OR2AK2Q8NG84 335 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 OR52B4Q8NGK2 314 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 C19orf43Q9BQ61 176 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 MED18Q9BUE0 208 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 ULBP2Q9BZM5 246 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 CXorf36Q9H7Y0 433 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 HEYLQ9NQ87 328 aaPredicted RBP7.45□□□□□ -1.22
VPS41-202ENST00000310301 MCTS1Q9ULC4 181 aaKnown RBP7.45□□□□□ -1.22
VPS41-202ENST00000310301 NDRG4Q9ULP0 352 aaKnown RBP7.45□□□□□ -1.22
VPS41-202ENST00000310301 ANKRD12Q6UB98 2062 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms