RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 ITFG2Q969R8 447 aa15.44■□□□□ 0.06
SSSCA1-201ENST00000309328 LURAP1Q96LR2 239 aa15.44■□□□□ 0.06
SSSCA1-201ENST00000309328 C1QTNF5Q9BXJ0 243 aa15.44■□□□□ 0.06
SSSCA1-201ENST00000309328 OPA3Q9H6K4 179 aa15.44■□□□□ 0.06
SSSCA1-201ENST00000309328 PRR14LQ5THK1 2151 aa15.43■□□□□ 0.06
SSSCA1-201ENST00000309328 CADP27708 2225 aa15.43■□□□□ 0.06
SSSCA1-201ENST00000309328 SULT1C4O75897 302 aa15.43■□□□□ 0.06
SSSCA1-201ENST00000309328 RAF1P04049 648 aa15.43■□□□□ 0.06
SSSCA1-201ENST00000309328 LCKP06239 509 aa15.43■□□□□ 0.06
SSSCA1-201ENST00000309328 MYF6P23409 242 aa15.43■□□□□ 0.06
SSSCA1-201ENST00000309328 WNT5AP41221 380 aa15.43■□□□□ 0.06
SSSCA1-201ENST00000309328 SLC6A9P48067 706 aa15.43■□□□□ 0.06
SSSCA1-201ENST00000309328 ACTA2P62736 377 aa15.43■□□□□ 0.06
SSSCA1-201ENST00000309328 ACTG2P63267 376 aa15.43■□□□□ 0.06
SSSCA1-201ENST00000309328 MALLQ13021 153 aa15.43■□□□□ 0.06
SSSCA1-201ENST00000309328 CDK5R2Q13319 367 aa15.43■□□□□ 0.06
SSSCA1-201ENST00000309328 ZNF829Q3KNS6 432 aaPredicted RBP15.43■□□□□ 0.06
SSSCA1-201ENST00000309328 ZNF718Q3SXZ3 478 aa15.43■□□□□ 0.06
SSSCA1-201ENST00000309328 PLEKHG7Q6ZR37 379 aa15.43■□□□□ 0.06
SSSCA1-201ENST00000309328 COLCA1Q6ZS62 124 aa15.43■□□□□ 0.06
SSSCA1-201ENST00000309328 KCTD20Q7Z5Y7 419 aa15.43■□□□□ 0.06
SSSCA1-201ENST00000309328 OR10H4Q8NGA5 316 aa15.43■□□□□ 0.06
SSSCA1-201ENST00000309328 OR52H1Q8NGJ2 320 aa15.43■□□□□ 0.06
SSSCA1-201ENST00000309328 OR1J1Q8NGS3 322 aa15.43■□□□□ 0.06
SSSCA1-201ENST00000309328 HAVCR2Q8TDQ0 301 aa15.43■□□□□ 0.06
SSSCA1-201ENST00000309328 MRPL24Q96A35 216 aaKnown RBP15.43■□□□□ 0.06
SSSCA1-201ENST00000309328 OR8B4Q96RC9 309 aa15.43■□□□□ 0.06
SSSCA1-201ENST00000309328 DOK1Q99704 481 aa15.43■□□□□ 0.06
SSSCA1-201ENST00000309328 PLK3Q9H4B4 646 aa15.43■□□□□ 0.06
SSSCA1-201ENST00000309328 CXorf56Q9H5V9 222 aa15.43■□□□□ 0.06
SSSCA1-201ENST00000309328 CBLN4Q9NTU7 201 aa15.43■□□□□ 0.06
SSSCA1-201ENST00000309328 PLCXD1Q9NUJ7 323 aa15.43■□□□□ 0.06
SSSCA1-201ENST00000309328 SLCO1C1Q9NYB5 712 aa15.43■□□□□ 0.06
SSSCA1-201ENST00000309328 CNOT2Q9NZN8 540 aaKnown RBP15.43■□□□□ 0.06
SSSCA1-201ENST00000309328 CGGBP1Q9UFW8 167 aaPredicted RBP15.43■□□□□ 0.06
SSSCA1-201ENST00000309328 EFCAB10A6NFE3 127 aa15.42■□□□□ 0.06
SSSCA1-201ENST00000309328 KRT8P05787 483 aa15.42■□□□□ 0.06
SSSCA1-201ENST00000309328 OR4A8P0C604 315 aa15.42■□□□□ 0.06
SSSCA1-201ENST00000309328 DANCRP0C864 163 aa15.42■□□□□ 0.06
SSSCA1-201ENST00000309328 FAM157BP0CG42 384 aa15.42■□□□□ 0.06
SSSCA1-201ENST00000309328 PSKH1P11801 424 aa15.42■□□□□ 0.06
SSSCA1-201ENST00000309328 PIPP12273 146 aaPredicted RBP15.42■□□□□ 0.06
SSSCA1-201ENST00000309328 ZNF250P15622 560 aa15.42■□□□□ 0.06
SSSCA1-201ENST00000309328 CFL1P23528 166 aaKnown RBP15.42■□□□□ 0.06
SSSCA1-201ENST00000309328 DNASE1P24855 282 aa15.42■□□□□ 0.06
SSSCA1-201ENST00000309328 DCKP27707 260 aa15.42■□□□□ 0.06
SSSCA1-201ENST00000309328 GCH1P30793 250 aa15.42■□□□□ 0.06
SSSCA1-201ENST00000309328 THBS4P35443 961 aa15.42■□□□□ 0.06
SSSCA1-201ENST00000309328 RIDAP52758 137 aaKnown RBP15.42■□□□□ 0.06
SSSCA1-201ENST00000309328 PSMA6P60900 246 aaKnown RBP15.42■□□□□ 0.06
SSSCA1-201ENST00000309328 PPP1CBP62140 327 aa15.42■□□□□ 0.06
SSSCA1-201ENST00000309328 SNRPD2P62316 118 aaKnown RBP15.42■□□□□ 0.06
SSSCA1-201ENST00000309328 ADIPOQQ15848 244 aa15.42■□□□□ 0.06
SSSCA1-201ENST00000309328 MBNL2Q5VZF2 373 aaKnown RBP15.42■□□□□ 0.06
SSSCA1-201ENST00000309328 ZNF101Q8IZC7 436 aa15.42■□□□□ 0.06
SSSCA1-201ENST00000309328 ZNF283Q8N7M2 679 aa15.42■□□□□ 0.06
SSSCA1-201ENST00000309328 CNIH3Q8TBE1 160 aa15.42■□□□□ 0.06
SSSCA1-201ENST00000309328 LGALS12Q96DT0 336 aa15.42■□□□□ 0.06
SSSCA1-201ENST00000309328 CCL19Q99731 98 aa15.42■□□□□ 0.06
SSSCA1-201ENST00000309328 JAM3Q9BX67 310 aa15.42■□□□□ 0.06
SSSCA1-201ENST00000309328 RGCCQ9H4X1 137 aa15.42■□□□□ 0.06
SSSCA1-201ENST00000309328 MOB1AQ9H8S9 216 aa15.42■□□□□ 0.06
SSSCA1-201ENST00000309328 ST6GALNAC2Q9UJ37 374 aa15.42■□□□□ 0.06
SSSCA1-201ENST00000309328 ZNF391Q9UJN7 358 aa15.42■□□□□ 0.06
SSSCA1-201ENST00000309328 IKZF2Q9UKS7 526 aa15.42■□□□□ 0.06
SSSCA1-201ENST00000309328 FBN2P35556 2912 aa15.42■□□□□ 0.06
SSSCA1-201ENST00000309328 NBPF19A0A087WUL8 3843 aa15.42■□□□□ 0.06
SSSCA1-201ENST00000309328 TACC2O95359 2948 aa15.41■□□□□ 0.06
SSSCA1-201ENST00000309328 DAPL1A0PJW8 107 aa15.41■□□□□ 0.06
SSSCA1-201ENST00000309328 J3QRE1 110 aa15.41■□□□□ 0.06
SSSCA1-201ENST00000309328 IGHA1P01876 353 aa15.41■□□□□ 0.06
SSSCA1-201ENST00000309328 MT-ND5P03915 603 aa15.41■□□□□ 0.06
SSSCA1-201ENST00000309328 LCATP04180 440 aa15.41■□□□□ 0.06
SSSCA1-201ENST00000309328 DBHP09172 617 aa15.41■□□□□ 0.06
SSSCA1-201ENST00000309328 TACSTD2P09758 323 aa15.41■□□□□ 0.06
SSSCA1-201ENST00000309328 LIPAP38571 399 aa15.41■□□□□ 0.06
SSSCA1-201ENST00000309328 CX3CR1P49238 355 aa15.41■□□□□ 0.06
SSSCA1-201ENST00000309328 KLF3P57682 345 aaPredicted RBP15.41■□□□□ 0.06
SSSCA1-201ENST00000309328 MRPL28Q13084 256 aaKnown RBP15.41■□□□□ 0.06
SSSCA1-201ENST00000309328 RSPO1Q2MKA7 263 aaPredicted RBP15.41■□□□□ 0.06
SSSCA1-201ENST00000309328 VHLLQ6RSH7 139 aa15.41■□□□□ 0.06
SSSCA1-201ENST00000309328 RFPL4BQ6ZWI9 263 aa15.41■□□□□ 0.06
SSSCA1-201ENST00000309328 FAM220AQ7Z4H9 259 aa15.41■□□□□ 0.06
SSSCA1-201ENST00000309328 SYNPRQ8TBG9 265 aa15.41■□□□□ 0.06
SSSCA1-201ENST00000309328 SNX33Q8WV41 574 aa15.41■□□□□ 0.06
SSSCA1-201ENST00000309328 SLC7A6Q92536 515 aa15.41■□□□□ 0.06
SSSCA1-201ENST00000309328 NEUROG1Q92886 237 aa15.41■□□□□ 0.06
SSSCA1-201ENST00000309328 LRP12Q9Y561 859 aa15.41■□□□□ 0.06
SSSCA1-201ENST00000309328 PMF1-BGLAPU3KQ54 211 aa15.41■□□□□ 0.06
SSSCA1-201ENST00000309328 APCP25054 2843 aa15.4■□□□□ 0.06
SSSCA1-201ENST00000309328 A0A1W2PQL4 384 aaPredicted RBP15.4■□□□□ 0.06
SSSCA1-201ENST00000309328 XRCC2O43543 280 aa15.4■□□□□ 0.06
SSSCA1-201ENST00000309328 RAC2P15153 192 aa15.4■□□□□ 0.06
SSSCA1-201ENST00000309328 SELEP16581 610 aa15.4■□□□□ 0.06
SSSCA1-201ENST00000309328 MMP16P51512 607 aa15.4■□□□□ 0.06
SSSCA1-201ENST00000309328 ZMAT1Q5H9K5 638 aa15.4■□□□□ 0.06
SSSCA1-201ENST00000309328 LRRN1Q6UXK5 716 aa15.4■□□□□ 0.06
SSSCA1-201ENST00000309328 SPATC1Q76KD6 591 aa15.4■□□□□ 0.06
SSSCA1-201ENST00000309328 MARS2Q96GW9 593 aaKnown RBP15.4■□□□□ 0.06
SSSCA1-201ENST00000309328 AMELYQ99218 206 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms