RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 ZNF304Q9HCX3 659 aa10□□□□□ -0.81
PTPN7-201ENST00000309017 RAB22AQ9UL26 194 aa10□□□□□ -0.81
PTPN7-201ENST00000309017 HSPB2A8KAH6 182 aa10□□□□□ -0.81
PTPN7-201ENST00000309017 TXNL1O43396 289 aa10□□□□□ -0.81
PTPN7-201ENST00000309017 EIF3GO75821 320 aaKnown RBP eCLIP10□□□□□ -0.81
PTPN7-201ENST00000309017 MPIG6BO95866 241 aa10□□□□□ -0.81
PTPN7-201ENST00000309017 MELTFP08582 738 aa10□□□□□ -0.81
PTPN7-201ENST00000309017 SFTA3P0C7M3 94 aa10□□□□□ -0.81
PTPN7-201ENST00000309017 CTSEP14091 401 aa10□□□□□ -0.81
PTPN7-201ENST00000309017 CPT2P23786 658 aa10□□□□□ -0.81
PTPN7-201ENST00000309017 ELAVL1Q15717 326 aaKnown RBP10□□□□□ -0.81
PTPN7-201ENST00000309017 HSPB2Q16082 182 aa10□□□□□ -0.81
PTPN7-201ENST00000309017 ZNF528Q3MIS6 628 aa10□□□□□ -0.81
PTPN7-201ENST00000309017 KLHL24Q6TFL4 600 aa10□□□□□ -0.81
PTPN7-201ENST00000309017 RTL10Q7L3V2 364 aa10□□□□□ -0.81
PTPN7-201ENST00000309017 DCXRQ7Z4W1 244 aa10□□□□□ -0.81
PTPN7-201ENST00000309017 ZDHHC22Q8N966 263 aa10□□□□□ -0.81
PTPN7-201ENST00000309017 FAM174AQ8TBP5 190 aa10□□□□□ -0.81
PTPN7-201ENST00000309017 GPER1Q99527 375 aa10□□□□□ -0.81
PTPN7-201ENST00000309017 SEC11CQ9BY50 192 aa10□□□□□ -0.81
PTPN7-201ENST00000309017 C17orf51A8MQB3 221 aa10□□□□□ -0.81
PTPN7-201ENST00000309017 DUS4LO95620 317 aaKnown RBP10□□□□□ -0.81
PTPN7-201ENST00000309017 SNRNP70P08621 437 aaKnown RBP10□□□□□ -0.81
PTPN7-201ENST00000309017 ABOP16442 354 aa10□□□□□ -0.81
PTPN7-201ENST00000309017 EMP2P54851 167 aa10□□□□□ -0.81
PTPN7-201ENST00000309017 RPL27P61353 136 aaKnown RBP10□□□□□ -0.81
PTPN7-201ENST00000309017 FBXO17Q96EF6 278 aa10□□□□□ -0.81
PTPN7-201ENST00000309017 SMIM3Q9BZL3 60 aa10□□□□□ -0.81
PTPN7-201ENST00000309017 NXF5Q9H1B4 397 aaKnown RBP10□□□□□ -0.81
PTPN7-201ENST00000309017 RPH3AQ9Y2J0 694 aaPredicted RBP10□□□□□ -0.81
PTPN7-201ENST00000309017 LRP3O75074 770 aa9.99□□□□□ -0.81
PTPN7-201ENST00000309017 CD74P04233 296 aa9.99□□□□□ -0.81
PTPN7-201ENST00000309017 MUC1P15941 1255 aaPredicted RBP9.99□□□□□ -0.81
PTPN7-201ENST00000309017 PPICP45877 212 aa9.99□□□□□ -0.81
PTPN7-201ENST00000309017 TAS2R31P59538 309 aa9.99□□□□□ -0.81
PTPN7-201ENST00000309017 EIF5AP63241 154 aaKnown RBP9.99□□□□□ -0.81
PTPN7-201ENST00000309017 DMWDQ09019 674 aa9.99□□□□□ -0.81
PTPN7-201ENST00000309017 GPM6BQ13491 265 aa9.99□□□□□ -0.81
PTPN7-201ENST00000309017 TOMM34Q15785 309 aaPredicted RBP9.99□□□□□ -0.81
PTPN7-201ENST00000309017 ZNF813Q6ZN06 617 aa9.99□□□□□ -0.81
PTPN7-201ENST00000309017 ZNF704Q6ZNC4 412 aaPredicted RBP9.99□□□□□ -0.81
PTPN7-201ENST00000309017 OR10H5Q8NGA6 315 aa9.99□□□□□ -0.81
PTPN7-201ENST00000309017 OR4A4PQ8NGN8 299 aa9.99□□□□□ -0.81
PTPN7-201ENST00000309017 OR52N5Q8NH56 324 aa9.99□□□□□ -0.81
PTPN7-201ENST00000309017 SLC37A2Q8TED4 501 aa9.99□□□□□ -0.81
PTPN7-201ENST00000309017 NECAB3Q96P71 396 aaPredicted RBP9.99□□□□□ -0.81
PTPN7-201ENST00000309017 KLHDC3Q9BQ90 382 aa9.99□□□□□ -0.81
PTPN7-201ENST00000309017 NRIP2Q9BQI9 281 aa9.99□□□□□ -0.81
PTPN7-201ENST00000309017 CNTD2Q9H8S5 307 aa9.99□□□□□ -0.81
PTPN7-201ENST00000309017 SMCO4Q9NRQ5 59 aa9.99□□□□□ -0.81
PTPN7-201ENST00000309017 TEX13DA0A0J9YY54 714 aaPredicted RBP9.99□□□□□ -0.81
PTPN7-201ENST00000309017 PRR19A6NJB7 356 aa9.99□□□□□ -0.81
PTPN7-201ENST00000309017 B4DGG1 531 aa9.99□□□□□ -0.81
PTPN7-201ENST00000309017 TXNDC12O95881 172 aa9.99□□□□□ -0.81
PTPN7-201ENST00000309017 FABP1P07148 127 aa9.99□□□□□ -0.81
PTPN7-201ENST00000309017 SKP2Q13309 424 aa9.99□□□□□ -0.81
PTPN7-201ENST00000309017 TOMM20Q15388 145 aa9.99□□□□□ -0.81
PTPN7-201ENST00000309017 ASPHD2Q6ICH7 369 aa9.99□□□□□ -0.81
PTPN7-201ENST00000309017 SLC29A4Q7RTT9 530 aa9.99□□□□□ -0.81
PTPN7-201ENST00000309017 NAA40Q86UY6 237 aa9.99□□□□□ -0.81
PTPN7-201ENST00000309017 ZSCAN4Q8NAM6 433 aaPredicted RBP9.99□□□□□ -0.81
PTPN7-201ENST00000309017 MYOZ1Q9NP98 299 aaPredicted RBP9.99□□□□□ -0.81
PTPN7-201ENST00000309017 A0A0A6YYH2 397 aa9.99□□□□□ -0.81
PTPN7-201ENST00000309017 PQLC2LA1A4F0 135 aa9.99□□□□□ -0.81
PTPN7-201ENST00000309017 A6NJ64 397 aa9.99□□□□□ -0.81
PTPN7-201ENST00000309017 RNASEK-C17orf49H0YIS7 233 aa9.99□□□□□ -0.81
PTPN7-201ENST00000309017 EFSO43281 561 aa9.99□□□□□ -0.81
PTPN7-201ENST00000309017 SYT7O43581 403 aa9.99□□□□□ -0.81
PTPN7-201ENST00000309017 AHSA1O95433 338 aa9.99□□□□□ -0.81
PTPN7-201ENST00000309017 ZNF20P17024 532 aa9.99□□□□□ -0.81
PTPN7-201ENST00000309017 GPR3P46089 330 aa9.99□□□□□ -0.81
PTPN7-201ENST00000309017 CLDN6P56747 220 aa9.99□□□□□ -0.81
PTPN7-201ENST00000309017 TMEM244Q5VVB8 128 aa9.99□□□□□ -0.81
PTPN7-201ENST00000309017 IL34Q6ZMJ4 242 aa9.99□□□□□ -0.81
PTPN7-201ENST00000309017 CDC6Q99741 560 aa9.99□□□□□ -0.81
PTPN7-201ENST00000309017 EDEM2Q9BV94 578 aa9.99□□□□□ -0.81
PTPN7-201ENST00000309017 ACKR4Q9NPB9 350 aa9.99□□□□□ -0.81
PTPN7-201ENST00000309017 MRPL22Q9NWU5 206 aaKnown RBP9.99□□□□□ -0.81
PTPN7-201ENST00000309017 LPAR3Q9UBY5 353 aa9.99□□□□□ -0.81
PTPN7-201ENST00000309017 DENND4AQ7Z401 1863 aa9.99□□□□□ -0.81
PTPN7-201ENST00000309017 TRAV36DV7A0A075B6V5 113 aa9.98□□□□□ -0.81
PTPN7-201ENST00000309017 MSGN1A6NI15 193 aa9.98□□□□□ -0.81
PTPN7-201ENST00000309017 KNG1P01042 644 aa9.98□□□□□ -0.81
PTPN7-201ENST00000309017 LINC00271P0C7V0 271 aa9.98□□□□□ -0.81
PTPN7-201ENST00000309017 NTSR1P30989 418 aa9.98□□□□□ -0.81
PTPN7-201ENST00000309017 HHEXQ03014 270 aa9.98□□□□□ -0.81
PTPN7-201ENST00000309017 ALG11Q2TAA5 492 aa9.98□□□□□ -0.81
PTPN7-201ENST00000309017 CATSPERDQ86XM0 798 aa9.98□□□□□ -0.81
PTPN7-201ENST00000309017 RRNAD1Q96FB5 475 aaKnown RBP9.98□□□□□ -0.81
PTPN7-201ENST00000309017 C5orf34Q96MH7 638 aa9.98□□□□□ -0.81
PTPN7-201ENST00000309017 CCNL2Q96S94 520 aaPredicted RBP9.98□□□□□ -0.81
PTPN7-201ENST00000309017 C20orf24Q9BUV8 137 aa9.98□□□□□ -0.81
PTPN7-201ENST00000309017 OR11A1Q9GZK7 315 aa9.98□□□□□ -0.81
PTPN7-201ENST00000309017 DHCR7Q9UBM7 475 aaKnown RBP9.98□□□□□ -0.81
PTPN7-201ENST00000309017 CARHSP1Q9Y2V2 147 aaKnown RBP9.98□□□□□ -0.81
PTPN7-201ENST00000309017 R4GMQ9 66 aa9.98□□□□□ -0.81
PTPN7-201ENST00000309017 LAMA1P25391 3075 aa9.98□□□□□ -0.81
PTPN7-201ENST00000309017 ASCC3Q8N3C0 2202 aaKnown RBP9.98□□□□□ -0.81
PTPN7-201ENST00000309017 NUDT19A8MXV4 375 aa9.98□□□□□ -0.81
PTPN7-201ENST00000309017 LINC00587B1AMM8 73 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms