RNA–Protein interactions for RNA: ENST00000307662.4

SYNPO-201, Transcript of synaptopodin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNPO, Length 5,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-201ENST00000307662 RPL18Q07020 188 aaKnown RBP15.77■□□□□ 0.12
SYNPO-201ENST00000307662 FAM78AQ5JUQ0 283 aa15.77■□□□□ 0.12
SYNPO-201ENST00000307662 OR2AE1Q8NHA4 323 aa15.77■□□□□ 0.12
SYNPO-201ENST00000307662 FAM174AQ8TBP5 190 aa15.77■□□□□ 0.12
SYNPO-201ENST00000307662 CHST11Q9NPF2 352 aa15.77■□□□□ 0.12
SYNPO-201ENST00000307662 DLL4Q9NR61 685 aa15.77■□□□□ 0.12
SYNPO-201ENST00000307662 B3GAT1Q9P2W7 334 aa15.77■□□□□ 0.12
SYNPO-201ENST00000307662 GDF2Q9UK05 429 aaPredicted RBP15.77■□□□□ 0.12
SYNPO-201ENST00000307662 SLCO1B1Q9Y6L6 691 aa15.77■□□□□ 0.12
SYNPO-201ENST00000307662 DEGS1O15121 323 aa15.77■□□□□ 0.12
SYNPO-201ENST00000307662 MBP02144 154 aa15.77■□□□□ 0.12
SYNPO-201ENST00000307662 AKR1C3P42330 323 aa15.77■□□□□ 0.12
SYNPO-201ENST00000307662 GPR85P60893 370 aa15.77■□□□□ 0.12
SYNPO-201ENST00000307662 COMMD1Q8N668 190 aa15.77■□□□□ 0.12
SYNPO-201ENST00000307662 OPA3Q9H6K4 179 aa15.77■□□□□ 0.12
SYNPO-201ENST00000307662 MMP26Q9NRE1 261 aa15.77■□□□□ 0.12
SYNPO-201ENST00000307662 ASH2LQ9UBL3 628 aa15.77■□□□□ 0.12
SYNPO-201ENST00000307662 RAB5AP20339 215 aa15.77■□□□□ 0.12
SYNPO-201ENST00000307662 RANP62826 216 aaKnown RBP15.77■□□□□ 0.12
SYNPO-201ENST00000307662 NCR3LG1Q68D85 454 aa15.77■□□□□ 0.12
SYNPO-201ENST00000307662 KDF1Q8NAX2 398 aaPredicted RBP15.77■□□□□ 0.12
SYNPO-201ENST00000307662 CMTM2Q8TAZ6 248 aa15.77■□□□□ 0.12
SYNPO-201ENST00000307662 ORAI1Q96D31 301 aa15.77■□□□□ 0.12
SYNPO-201ENST00000307662 DHCR7Q9UBM7 475 aaKnown RBP15.77■□□□□ 0.12
SYNPO-201ENST00000307662 PCMT1P22061 227 aa15.77■□□□□ 0.11
SYNPO-201ENST00000307662 LBX1P52954 281 aa15.77■□□□□ 0.11
SYNPO-201ENST00000307662 PCBP4P57723 403 aaKnown RBP15.77■□□□□ 0.11
SYNPO-201ENST00000307662 MOGAT2Q3SYC2 334 aa15.77■□□□□ 0.11
SYNPO-201ENST00000307662 GOT1L1Q8NHS2 421 aaPredicted RBP15.77■□□□□ 0.11
SYNPO-201ENST00000307662 BARHL1Q9BZE3 327 aa15.77■□□□□ 0.11
SYNPO-201ENST00000307662 PISDQ9UG56 409 aa15.77■□□□□ 0.11
SYNPO-201ENST00000307662 GPR160Q9UJ42 338 aa15.77■□□□□ 0.11
SYNPO-201ENST00000307662 SLC5A6Q9Y289 635 aa15.77■□□□□ 0.11
SYNPO-201ENST00000307662 PRAMEF25A6NGN4 478 aa15.76■□□□□ 0.11
SYNPO-201ENST00000307662 NTF3P20783 257 aa15.76■□□□□ 0.11
SYNPO-201ENST00000307662 IRS1P35568 1242 aa15.76■□□□□ 0.11
SYNPO-201ENST00000307662 LSMEM1Q8N8F7 131 aa15.76■□□□□ 0.11
SYNPO-201ENST00000307662 SLC22A13Q9Y226 551 aa15.76■□□□□ 0.11
SYNPO-201ENST00000307662 K7ESM1 405 aa15.76■□□□□ 0.11
SYNPO-201ENST00000307662 TSPAN12O95859 305 aa15.76■□□□□ 0.11
SYNPO-201ENST00000307662 SPANXN5Q5MJ07 72 aa15.76■□□□□ 0.11
SYNPO-201ENST00000307662 AGBL4Q5VU57 503 aa15.76■□□□□ 0.11
SYNPO-201ENST00000307662 THNSL2Q86YJ6 484 aa15.76■□□□□ 0.11
SYNPO-201ENST00000307662 CRLF2Q9HC73 371 aa15.76■□□□□ 0.11
SYNPO-201ENST00000307662 NRAPQ86VF7 1730 aa15.76■□□□□ 0.11
SYNPO-201ENST00000307662 ZNF626Q68DY1 528 aa15.76■□□□□ 0.11
SYNPO-201ENST00000307662 ASTLQ6HA08 431 aaPredicted RBP15.76■□□□□ 0.11
SYNPO-201ENST00000307662 OR2G2Q8NGZ5 317 aa15.76■□□□□ 0.11
SYNPO-201ENST00000307662 SLC25A43Q8WUT9 341 aaPredicted RBP15.76■□□□□ 0.11
SYNPO-201ENST00000307662 EMC6Q9BV81 110 aa15.76■□□□□ 0.11
SYNPO-201ENST00000307662 GSTP1P09211 210 aaKnown RBP15.76■□□□□ 0.11
SYNPO-201ENST00000307662 ICAM2P13598 275 aa15.76■□□□□ 0.11
SYNPO-201ENST00000307662 GALP22466 123 aa15.76■□□□□ 0.11
SYNPO-201ENST00000307662 RAB13P51153 203 aa15.76■□□□□ 0.11
SYNPO-201ENST00000307662 DCDP81605 110 aaKnown RBP15.76■□□□□ 0.11
SYNPO-201ENST00000307662 CDKN3Q16667 212 aa15.76■□□□□ 0.11
SYNPO-201ENST00000307662 DND1Q8IYX4 353 aaKnown RBP15.76■□□□□ 0.11
SYNPO-201ENST00000307662 ZBP1Q9H171 429 aa15.76■□□□□ 0.11
SYNPO-201ENST00000307662 WNT1P04628 370 aa15.76■□□□□ 0.11
SYNPO-201ENST00000307662 VAMP3Q15836 100 aa15.76■□□□□ 0.11
SYNPO-201ENST00000307662 CORO6Q6QEF8 472 aa15.76■□□□□ 0.11
SYNPO-201ENST00000307662 EDAQ92838 391 aa15.76■□□□□ 0.11
SYNPO-201ENST00000307662 SIGLEC11Q96RL6 698 aa15.76■□□□□ 0.11
SYNPO-201ENST00000307662 S1PR5Q9H228 398 aa15.76■□□□□ 0.11
SYNPO-201ENST00000307662 TMPRSS5Q9H3S3 457 aa15.76■□□□□ 0.11
SYNPO-201ENST00000307662 CD207Q9UJ71 328 aa15.76■□□□□ 0.11
SYNPO-201ENST00000307662 KCNG2Q9UJ96 466 aa15.76■□□□□ 0.11
SYNPO-201ENST00000307662 TRBV5-4A0A0C4DH59 114 aa15.75■□□□□ 0.11
SYNPO-201ENST00000307662 FGF17O60258 216 aa15.75■□□□□ 0.11
SYNPO-201ENST00000307662 SNRPEP62304 92 aaKnown RBP15.75■□□□□ 0.11
SYNPO-201ENST00000307662 MRPS21P82921 87 aaKnown RBP15.75■□□□□ 0.11
SYNPO-201ENST00000307662 PCK2Q16822 640 aa15.75■□□□□ 0.11
SYNPO-201ENST00000307662 MAMSTRQ6ZN01 415 aa15.75■□□□□ 0.11
SYNPO-201ENST00000307662 LRRTM1Q86UE6 522 aa15.75■□□□□ 0.11
SYNPO-201ENST00000307662 RTN4RL1Q86UN2 441 aaPredicted RBP15.75■□□□□ 0.11
SYNPO-201ENST00000307662 MAML2Q8IZL2 1156 aaPredicted RBP15.75■□□□□ 0.11
SYNPO-201ENST00000307662 OR11L1Q8NGX0 322 aa15.75■□□□□ 0.11
SYNPO-201ENST00000307662 NRSN2Q9GZP1 204 aa15.75■□□□□ 0.11
SYNPO-201ENST00000307662 SSUH2Q9Y2M2 353 aa15.75■□□□□ 0.11
SYNPO-201ENST00000307662 GLSO94925 669 aaPredicted RBP15.75■□□□□ 0.11
SYNPO-201ENST00000307662 GLAP06280 429 aa15.75■□□□□ 0.11
SYNPO-201ENST00000307662 GUCA2AQ02747 115 aa15.75■□□□□ 0.11
SYNPO-201ENST00000307662 OR2W3Q7Z3T1 314 aa15.75■□□□□ 0.11
SYNPO-201ENST00000307662 DTWD2Q8NBA8 298 aa15.75■□□□□ 0.11
SYNPO-201ENST00000307662 COL22A1Q8NFW1 1626 aaPredicted RBP15.75■□□□□ 0.11
SYNPO-201ENST00000307662 PRSS37A4D1T9 235 aa15.75■□□□□ 0.11
SYNPO-201ENST00000307662 UBE2G1P62253 170 aa15.75■□□□□ 0.11
SYNPO-201ENST00000307662 SSX1Q16384 188 aa15.75■□□□□ 0.11
SYNPO-201ENST00000307662 TMEM128Q5BJH2 165 aa15.75■□□□□ 0.11
SYNPO-201ENST00000307662 ELFN2Q5R3F8 820 aa15.75■□□□□ 0.11
SYNPO-201ENST00000307662 OR51F2Q8NH61 342 aa15.75■□□□□ 0.11
SYNPO-201ENST00000307662 MARVELD1Q9BSK0 173 aa15.75■□□□□ 0.11
SYNPO-201ENST00000307662 SLC6A13Q9NSD5 602 aa15.75■□□□□ 0.11
SYNPO-201ENST00000307662 KCND3Q9UK17 655 aa15.75■□□□□ 0.11
SYNPO-201ENST00000307662 FAM96BQ9Y3D0 163 aa15.75■□□□□ 0.11
SYNPO-201ENST00000307662 OR5H8P0DN80 308 aa15.75■□□□□ 0.11
SYNPO-201ENST00000307662 FGF7P21781 194 aa15.75■□□□□ 0.11
SYNPO-201ENST00000307662 UBE2G2P60604 165 aa15.75■□□□□ 0.11
SYNPO-201ENST00000307662 AGERQ15109 404 aa15.75■□□□□ 0.11
SYNPO-201ENST00000307662 SPICQ8N5J4 248 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms