RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 RBMS2Q15434 407 aaKnown RBP7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 OTUD1Q5VV17 481 aaPredicted RBP7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 HSD17B8Q92506 261 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 NIPSNAP3BQ9BS92 247 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 COMMD5Q9GZQ3 224 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 OR51J1Q9H342 316 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 ZNF768Q9H5H4 540 aaKnown RBP7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 CEPT1Q9Y6K0 416 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 RNASEK-C17orf49H0YIS7 233 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 UBL3O95164 117 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 HPNP05981 417 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 HTR6P50406 440 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 MAT1AQ00266 395 aaKnown RBP7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 YIF1BQ5BJH7 314 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 ZNF425Q6IV72 752 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 LACC1Q8IV20 430 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 TMEM163Q8TC26 289 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 LAMP3Q9UQV4 416 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 TRGV5A0A0B4J1U4 118 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 ARRDC5A6NEK1 342 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 FOLR1P15328 257 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 S100A4P26447 101 aaKnown RBP7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 HTR2CP28335 458 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 LAP3P28838 519 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 PMPCAQ10713 525 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 SAXO2Q658L1 398 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 Q7L0L9 218 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 PTRH1Q86Y79 214 aaKnown RBP7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 THNSL2Q86YJ6 484 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 ZNF683Q8IZ20 524 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 UBAC2Q8NBM4 344 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 ALG14Q96F25 216 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 REEP6Q96HR9 211 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 NME4O00746 187 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 DNPH1O43598 174 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 FPR3P25089 353 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 NHSL2Q5HYW2 709 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 SVBPQ8N300 66 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 MRPS24Q96EL2 167 aaKnown RBP7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 GRAMD2BQ96HH9 432 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 TMEM208Q9BTX3 173 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 SOCS6O14544 535 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 S100A8P05109 93 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 MMP11P24347 488 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 ACKR3P25106 362 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 LRRC10Q5BKY1 277 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 XKR7Q5GH72 579 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 VRK3Q8IV63 474 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 CA5BP1Q8WTZ4 195 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 WBP2Q969T9 261 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 ZNF775Q96BV0 537 aaPredicted RBP7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 WDR34Q96EX3 536 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 TAS2R16Q9NYV7 291 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 SLC22A20A6NK97 555 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 PHF1O43189 567 aaPredicted RBP7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 ORM1P02763 201 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 CEACAM1P13688 526 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 ARNTP27540 789 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 MAGEB1P43366 347 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 OR10A3P58181 314 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 RPS16P62249 146 aaKnown RBP7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 TMEM92Q6UXU6 159 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 ZNF546Q86UE3 836 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 ZNF573Q86YE8 665 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 TMIGD2Q96BF3 282 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 C20orf85Q9H1P6 137 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 MTCH1Q9NZJ7 389 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 CD300AQ9UGN4 299 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 PTGDR2Q9Y5Y4 395 aa7.58□□□□□ -1.2
PCDHB1-201ENST00000306549 HEATR5AQ86XA9 2040 aa7.57□□□□□ -1.2
PCDHB1-201ENST00000306549 MEIS3P1A6NDR6 274 aa7.57□□□□□ -1.2
PCDHB1-201ENST00000306549 ZNF701M0R085 212 aaPredicted RBP7.57□□□□□ -1.2
PCDHB1-201ENST00000306549 FCER1GP30273 86 aa7.57□□□□□ -1.2
PCDHB1-201ENST00000306549 OR5I1Q13606 314 aa7.57□□□□□ -1.2
PCDHB1-201ENST00000306549 SLC9A3R2Q15599 337 aa7.57□□□□□ -1.2
PCDHB1-201ENST00000306549 GUSBP11Q6P575 273 aa7.57□□□□□ -1.2
PCDHB1-201ENST00000306549 LSRQ86X29 649 aaPredicted RBP7.57□□□□□ -1.2
PCDHB1-201ENST00000306549 OR9Q2Q8NGE9 314 aa7.57□□□□□ -1.2
PCDHB1-201ENST00000306549 OXGR1Q96P68 337 aa7.57□□□□□ -1.2
PCDHB1-201ENST00000306549 SLA2Q9H6Q3 261 aa7.57□□□□□ -1.2
PCDHB1-201ENST00000306549 P4HTMQ9NXG6 502 aa7.57□□□□□ -1.2
PCDHB1-201ENST00000306549 EMCNQ9ULC0 261 aa7.57□□□□□ -1.2
PCDHB1-201ENST00000306549 SHANK1Q9Y566 2161 aa7.57□□□□□ -1.2
PCDHB1-201ENST00000306549 TMEM82A0PJX8 343 aa7.57□□□□□ -1.2
PCDHB1-201ENST00000306549 FAM166BA8MTA8 275 aa7.57□□□□□ -1.2
PCDHB1-201ENST00000306549 OIP5O43482 229 aa7.57□□□□□ -1.2
PCDHB1-201ENST00000306549 TNFRSF1AP19438 455 aa7.57□□□□□ -1.2
PCDHB1-201ENST00000306549 OMGP23515 440 aa7.57□□□□□ -1.2
PCDHB1-201ENST00000306549 C6orf89Q6UWU4 347 aa7.57□□□□□ -1.2
PCDHB1-201ENST00000306549 TFAP2EQ6VUC0 442 aa7.57□□□□□ -1.2
PCDHB1-201ENST00000306549 NUFIP2Q7Z417 695 aaKnown RBP7.57□□□□□ -1.2
PCDHB1-201ENST00000306549 CA13Q8N1Q1 262 aa7.57□□□□□ -1.2
PCDHB1-201ENST00000306549 SIRT6Q8N6T7 355 aa7.57□□□□□ -1.2
PCDHB1-201ENST00000306549 BABAM2Q9NXR7 383 aa7.57□□□□□ -1.2
PCDHB1-201ENST00000306549 RPS10-NUDT3A0A1W2PQS6 291 aa7.57□□□□□ -1.2
PCDHB1-201ENST00000306549 AQP7O14520 342 aa7.57□□□□□ -1.2
PCDHB1-201ENST00000306549 EFSO43281 561 aa7.57□□□□□ -1.2
PCDHB1-201ENST00000306549 GFRA3O60609 400 aa7.57□□□□□ -1.2
PCDHB1-201ENST00000306549 GJB3O75712 270 aa7.57□□□□□ -1.2
PCDHB1-201ENST00000306549 F13BP05160 661 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms