RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 HLXQ14774 488 aaPredicted RBP12.65□□□□□ -0.38
SDC2-201ENST00000302190 EBPQ15125 230 aaKnown RBP12.65□□□□□ -0.38
SDC2-201ENST00000302190 PTCRAQ6ISU1 281 aaPredicted RBP12.65□□□□□ -0.38
SDC2-201ENST00000302190 MARCH1Q8TCQ1 289 aa12.65□□□□□ -0.38
SDC2-201ENST00000302190 SCARB1Q8WTV0 552 aa12.65□□□□□ -0.38
SDC2-201ENST00000302190 ZNF75AQ96N20 296 aa12.65□□□□□ -0.38
SDC2-201ENST00000302190 PRRT1Q99946 306 aa12.65□□□□□ -0.38
SDC2-201ENST00000302190 MRI1Q9BV20 369 aa12.65□□□□□ -0.38
SDC2-201ENST00000302190 SHARPINQ9H0F6 387 aa12.65□□□□□ -0.38
SDC2-201ENST00000302190 ZNF160Q9HCG1 818 aa12.65□□□□□ -0.38
SDC2-201ENST00000302190 POLE3Q9NRF9 147 aa12.65□□□□□ -0.38
SDC2-201ENST00000302190 ETV7Q9Y603 341 aa12.65□□□□□ -0.38
SDC2-201ENST00000302190 MPDZO75970 2070 aa12.65□□□□□ -0.38
SDC2-201ENST00000302190 SPTY2D1-AS1A0A0U1RR47 76 aa12.65□□□□□ -0.38
SDC2-201ENST00000302190 SLC22A23A1A5C7 686 aa12.65□□□□□ -0.38
SDC2-201ENST00000302190 NPIPA2E9PIF3 369 aa12.65□□□□□ -0.38
SDC2-201ENST00000302190 NPIPA3F8WFD2 350 aa12.65□□□□□ -0.38
SDC2-201ENST00000302190 FABP1P07148 127 aa12.65□□□□□ -0.38
SDC2-201ENST00000302190 MESTQ5EB52 335 aa12.65□□□□□ -0.38
SDC2-201ENST00000302190 KRBOX4Q5JUW0 171 aa12.65□□□□□ -0.38
SDC2-201ENST00000302190 DCAF12L2Q5VW00 463 aa12.65□□□□□ -0.38
SDC2-201ENST00000302190 THRSPQ92748 146 aa12.65□□□□□ -0.38
SDC2-201ENST00000302190 FAM221AA4D161 298 aa12.65□□□□□ -0.39
SDC2-201ENST00000302190 A8MVM7 634 aa12.65□□□□□ -0.39
SDC2-201ENST00000302190 MCRIP1C9JLW8 97 aa12.65□□□□□ -0.39
SDC2-201ENST00000302190 OGG1O15527 345 aa12.65□□□□□ -0.39
SDC2-201ENST00000302190 XRCC3O43542 346 aa12.65□□□□□ -0.39
SDC2-201ENST00000302190 TGM6O95932 706 aa12.65□□□□□ -0.39
SDC2-201ENST00000302190 SERPINA5P05154 406 aa12.65□□□□□ -0.39
SDC2-201ENST00000302190 MRPS21P82921 87 aaKnown RBP12.65□□□□□ -0.39
SDC2-201ENST00000302190 HNF4GQ14541 408 aa12.65□□□□□ -0.39
SDC2-201ENST00000302190 NR0B2Q15466 257 aa12.65□□□□□ -0.39
SDC2-201ENST00000302190 GLIPR1L1Q6UWM5 242 aa12.65□□□□□ -0.39
SDC2-201ENST00000302190 OR51B6Q9H340 312 aa12.65□□□□□ -0.39
SDC2-201ENST00000302190 LRP12Q9Y561 859 aa12.65□□□□□ -0.39
SDC2-201ENST00000302190 ALOX12BO75342 701 aa12.64□□□□□ -0.39
SDC2-201ENST00000302190 CTAG2O75638 210 aa12.64□□□□□ -0.39
SDC2-201ENST00000302190 PPICP45877 212 aa12.64□□□□□ -0.39
SDC2-201ENST00000302190 POLR2HP52434 150 aaKnown RBP12.64□□□□□ -0.39
SDC2-201ENST00000302190 MEX3BQ6ZN04 569 aaKnown RBP12.64□□□□□ -0.39
SDC2-201ENST00000302190 PXKQ7Z7A4 578 aa12.64□□□□□ -0.39
SDC2-201ENST00000302190 LRRTM1Q86UE6 522 aa12.64□□□□□ -0.39
SDC2-201ENST00000302190 C2CD4CQ8TF44 421 aa12.64□□□□□ -0.39
SDC2-201ENST00000302190 RAB3CQ96E17 227 aa12.64□□□□□ -0.39
SDC2-201ENST00000302190 C4orf45Q96LM5 186 aa12.64□□□□□ -0.39
SDC2-201ENST00000302190 NECAB3Q96P71 396 aaPredicted RBP12.64□□□□□ -0.39
SDC2-201ENST00000302190 ARPC3O15145 178 aa12.64□□□□□ -0.39
SDC2-201ENST00000302190 LPLP06858 475 aa12.64□□□□□ -0.39
SDC2-201ENST00000302190 HLA-DOBP13765 273 aa12.64□□□□□ -0.39
SDC2-201ENST00000302190 ABOP16442 354 aa12.64□□□□□ -0.39
SDC2-201ENST00000302190 ACSM1Q08AH1 577 aa12.64□□□□□ -0.39
SDC2-201ENST00000302190 ADGRE4PQ86SQ3 457 aa12.64□□□□□ -0.39
SDC2-201ENST00000302190 GALNT16Q8N428 558 aa12.64□□□□□ -0.39
SDC2-201ENST00000302190 OTOSQ8NHW6 89 aa12.64□□□□□ -0.39
SDC2-201ENST00000302190 SLC25A38Q96DW6 304 aa12.64□□□□□ -0.39
SDC2-201ENST00000302190 ARL5BQ96KC2 179 aa12.64□□□□□ -0.39
SDC2-201ENST00000302190 GUCD1Q96NT3 240 aa12.64□□□□□ -0.39
SDC2-201ENST00000302190 CDC6Q99741 560 aa12.64□□□□□ -0.39
SDC2-201ENST00000302190 FBRSQ9HAH7 460 aa12.64□□□□□ -0.39
SDC2-201ENST00000302190 PLEKHJ1Q9NW61 149 aa12.64□□□□□ -0.39
SDC2-201ENST00000302190 KIF25Q9UIL4 384 aa12.64□□□□□ -0.39
SDC2-201ENST00000302190 CUL9Q8IWT3 2517 aa12.64□□□□□ -0.39
SDC2-201ENST00000302190 C7orf66A4D0T2 115 aa12.64□□□□□ -0.39
SDC2-201ENST00000302190 ZNF205O95201 554 aa12.64□□□□□ -0.39
SDC2-201ENST00000302190 CXCL2P19875 107 aa12.64□□□□□ -0.39
SDC2-201ENST00000302190 ALOX5APP20292 161 aa12.64□□□□□ -0.39
SDC2-201ENST00000302190 BLVRBP30043 206 aaPredicted RBP12.64□□□□□ -0.39
SDC2-201ENST00000302190 THBS2P35442 1172 aa12.64□□□□□ -0.39
SDC2-201ENST00000302190 FZD2Q14332 565 aa12.64□□□□□ -0.39
SDC2-201ENST00000302190 PHYHIPQ92561 330 aa12.64□□□□□ -0.39
SDC2-201ENST00000302190 ZNF764Q96H86 408 aaPredicted RBP12.64□□□□□ -0.39
SDC2-201ENST00000302190 TMEM59Q9BXS4 323 aa12.64□□□□□ -0.39
SDC2-201ENST00000302190 OBP2AQ9NY56 170 aa12.64□□□□□ -0.39
SDC2-201ENST00000302190 ESPL1Q14674 2120 aa12.63□□□□□ -0.39
SDC2-201ENST00000302190 H7C417 338 aa12.63□□□□□ -0.39
SDC2-201ENST00000302190 RBMXL2O75526 392 aaKnown RBP12.63□□□□□ -0.39
SDC2-201ENST00000302190 AKR1C3P42330 323 aa12.63□□□□□ -0.39
SDC2-201ENST00000302190 UBE2IP63279 158 aaKnown RBP12.63□□□□□ -0.39
SDC2-201ENST00000302190 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.63□□□□□ -0.39
SDC2-201ENST00000302190 HLA-CQ95604 372 aa12.63□□□□□ -0.39
SDC2-201ENST00000302190 DDIT4LQ96D03 193 aa12.63□□□□□ -0.39
SDC2-201ENST00000302190 MTFP1Q9UDX5 166 aa12.63□□□□□ -0.39
SDC2-201ENST00000302190 MRPS28Q9Y2Q9 187 aaKnown RBP12.63□□□□□ -0.39
SDC2-201ENST00000302190 DOCK7Q96N67 2140 aa12.63□□□□□ -0.39
SDC2-201ENST00000302190 TLCD2A6NGC4 264 aa12.63□□□□□ -0.39
SDC2-201ENST00000302190 TTLL8A6PVC2 850 aa12.63□□□□□ -0.39
SDC2-201ENST00000302190 HSPB6O14558 160 aa12.63□□□□□ -0.39
SDC2-201ENST00000302190 IGHV3-9P01782 118 aa12.63□□□□□ -0.39
SDC2-201ENST00000302190 LCATP04180 440 aa12.63□□□□□ -0.39
SDC2-201ENST00000302190 UBBP0CG47 229 aa12.63□□□□□ -0.39
SDC2-201ENST00000302190 UBCP0CG48 685 aaKnown RBP12.63□□□□□ -0.39
SDC2-201ENST00000302190 RAB6AP20340 208 aa12.63□□□□□ -0.39
SDC2-201ENST00000302190 EXOSC6Q5RKV6 272 aaKnown RBP12.63□□□□□ -0.39
SDC2-201ENST00000302190 ASB17Q8WXJ9 295 aa12.63□□□□□ -0.39
SDC2-201ENST00000302190 C1orf198Q9H425 327 aa12.63□□□□□ -0.39
SDC2-201ENST00000302190 MEMO1Q9Y316 297 aa12.63□□□□□ -0.39
SDC2-201ENST00000302190 CAPZBP47756 277 aa12.63□□□□□ -0.39
SDC2-201ENST00000302190 DAP3P51398 398 aaKnown RBP12.63□□□□□ -0.39
SDC2-201ENST00000302190 HSD11B2P80365 405 aa12.63□□□□□ -0.39
SDC2-201ENST00000302190 SRYQ05066 204 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms