RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 MTFP1Q9UDX5 166 aa11.98□□□□□ -0.49
CASC4-201ENST00000299957 CHRNA9Q9UGM1 479 aa11.98□□□□□ -0.49
CASC4-201ENST00000299957 SIP14410 1827 aa11.98□□□□□ -0.49
CASC4-201ENST00000299957 MPDZO75970 2070 aa11.98□□□□□ -0.49
CASC4-201ENST00000299957 PCNX1Q96RV3 2341 aa11.98□□□□□ -0.49
CASC4-201ENST00000299957 TMEM272A0A1B0GTI8 110 aa11.98□□□□□ -0.49
CASC4-201ENST00000299957 H3BMH7 237 aa11.98□□□□□ -0.49
CASC4-201ENST00000299957 NME2P1O60361 137 aa11.98□□□□□ -0.49
CASC4-201ENST00000299957 IGHG1P01857 330 aa11.98□□□□□ -0.49
CASC4-201ENST00000299957 HSF1Q00613 529 aa11.98□□□□□ -0.49
CASC4-201ENST00000299957 MESTQ5EB52 335 aa11.98□□□□□ -0.49
CASC4-201ENST00000299957 CD200R1LQ6Q8B3 271 aa11.98□□□□□ -0.49
CASC4-201ENST00000299957 SVBPQ8N300 66 aa11.98□□□□□ -0.49
CASC4-201ENST00000299957 OR52N4Q8NGI2 321 aa11.98□□□□□ -0.49
CASC4-201ENST00000299957 STT3BQ8TCJ2 826 aa11.98□□□□□ -0.49
CASC4-201ENST00000299957 ST7LQ8TDW4 575 aa11.98□□□□□ -0.49
CASC4-201ENST00000299957 BORCS8Q96FH0 119 aa11.98□□□□□ -0.49
CASC4-201ENST00000299957 SLC25A21Q9BQT8 299 aaPredicted RBP11.98□□□□□ -0.49
CASC4-201ENST00000299957 LRRC61Q9BV99 259 aa11.98□□□□□ -0.49
CASC4-201ENST00000299957 MRPS17Q9Y2R5 130 aaKnown RBP11.98□□□□□ -0.49
CASC4-201ENST00000299957 PTRH2Q9Y3E5 179 aaKnown RBP11.98□□□□□ -0.49
CASC4-201ENST00000299957 PSME4Q14997 1843 aa11.98□□□□□ -0.49
CASC4-201ENST00000299957 K7EPK0 472 aa11.98□□□□□ -0.49
CASC4-201ENST00000299957 CT45A8P0DMV1 189 aa11.98□□□□□ -0.49
CASC4-201ENST00000299957 CT45A9P0DMV2 189 aa11.98□□□□□ -0.49
CASC4-201ENST00000299957 IL32P24001 234 aa11.98□□□□□ -0.49
CASC4-201ENST00000299957 PPICP45877 212 aa11.98□□□□□ -0.49
CASC4-201ENST00000299957 OR2B8PP59922 312 aa11.98□□□□□ -0.49
CASC4-201ENST00000299957 GNMTQ14749 295 aa11.98□□□□□ -0.49
CASC4-201ENST00000299957 RSPO4Q2I0M5 234 aaPredicted RBP11.98□□□□□ -0.49
CASC4-201ENST00000299957 CT45A2Q5DJT8 189 aa11.98□□□□□ -0.49
CASC4-201ENST00000299957 SLC25A30Q5SVS4 291 aa11.98□□□□□ -0.49
CASC4-201ENST00000299957 GRAMD2AQ8IUY3 354 aa11.98□□□□□ -0.49
CASC4-201ENST00000299957 SLC22A24Q8N4F4 322 aa11.98□□□□□ -0.49
CASC4-201ENST00000299957 FAM71E2Q8N5Q1 922 aa11.98□□□□□ -0.49
CASC4-201ENST00000299957 NKX6-2Q9C056 277 aaPredicted RBP11.98□□□□□ -0.49
CASC4-201ENST00000299957 CHRDQ9H2X0 955 aa11.98□□□□□ -0.49
CASC4-201ENST00000299957 GPR160Q9UJ42 338 aa11.98□□□□□ -0.49
CASC4-201ENST00000299957 KCNS2Q9ULS6 477 aa11.98□□□□□ -0.49
CASC4-201ENST00000299957 TNS1Q9HBL0 1735 aaKnown RBP11.97□□□□□ -0.49
CASC4-201ENST00000299957 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.97□□□□□ -0.49
CASC4-201ENST00000299957 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.97□□□□□ -0.49
CASC4-201ENST00000299957 RER1O15258 196 aa11.97□□□□□ -0.49
CASC4-201ENST00000299957 SGCEO43556 437 aa11.97□□□□□ -0.49
CASC4-201ENST00000299957 VSIG10L2P0DP72 767 aa11.97□□□□□ -0.49
CASC4-201ENST00000299957 RAB5BP61020 215 aa11.97□□□□□ -0.49
CASC4-201ENST00000299957 MFGE8Q08431 387 aaPredicted RBP11.97□□□□□ -0.49
CASC4-201ENST00000299957 PDZK1IP1Q13113 114 aa11.97□□□□□ -0.49
CASC4-201ENST00000299957 NT5CQ8TCD5 201 aa11.97□□□□□ -0.49
CASC4-201ENST00000299957 S100PBPQ96BU1 408 aa11.97□□□□□ -0.49
CASC4-201ENST00000299957 ARPC5LQ9BPX5 153 aa11.97□□□□□ -0.49
CASC4-201ENST00000299957 PCDHB10Q9UN67 800 aa11.97□□□□□ -0.49
CASC4-201ENST00000299957 YBX2Q9Y2T7 364 aaKnown RBP11.97□□□□□ -0.49
CASC4-201ENST00000299957 BORCS7-ASMTA0A0B4J1R7 106 aa11.97□□□□□ -0.49
CASC4-201ENST00000299957 SLC22A23A1A5C7 686 aa11.97□□□□□ -0.49
CASC4-201ENST00000299957 SLC17A2O00624 439 aa11.97□□□□□ -0.49
CASC4-201ENST00000299957 LMX1BO60663 402 aa11.97□□□□□ -0.49
CASC4-201ENST00000299957 ZNF354AO60765 605 aaPredicted RBP11.97□□□□□ -0.49
CASC4-201ENST00000299957 PET100P0DJ07 73 aa11.97□□□□□ -0.49
CASC4-201ENST00000299957 OR13C7P0DN81 318 aa11.97□□□□□ -0.49
CASC4-201ENST00000299957 CD96P40200 585 aa11.97□□□□□ -0.49
CASC4-201ENST00000299957 RFC3P40938 356 aa11.97□□□□□ -0.49
CASC4-201ENST00000299957 PEA15Q15121 130 aa11.97□□□□□ -0.49
CASC4-201ENST00000299957 H1FNTQ75WM6 255 aaPredicted RBP11.97□□□□□ -0.49
CASC4-201ENST00000299957 VASH2Q86V25 355 aa11.97□□□□□ -0.49
CASC4-201ENST00000299957 OR5L1Q8NGL2 311 aa11.97□□□□□ -0.49
CASC4-201ENST00000299957 SLC25A38Q96DW6 304 aa11.97□□□□□ -0.49
CASC4-201ENST00000299957 ZC3HAV1LQ96H79 300 aaKnown RBP11.97□□□□□ -0.49
CASC4-201ENST00000299957 OR8B4Q96RC9 309 aa11.97□□□□□ -0.49
CASC4-201ENST00000299957 ULBP2Q9BZM5 246 aa11.97□□□□□ -0.49
CASC4-201ENST00000299957 KLF15Q9UIH9 416 aa11.97□□□□□ -0.49
CASC4-201ENST00000299957 A6NIZ1 184 aa11.97□□□□□ -0.49
CASC4-201ENST00000299957 C1orf196B1AJZ1 125 aa11.97□□□□□ -0.49
CASC4-201ENST00000299957 TP53I11O14683 189 aa11.97□□□□□ -0.49
CASC4-201ENST00000299957 MTRF1O75570 445 aaKnown RBP11.97□□□□□ -0.49
CASC4-201ENST00000299957 SCRG1O75711 98 aa11.97□□□□□ -0.49
CASC4-201ENST00000299957 CD53P19397 219 aa11.97□□□□□ -0.49
CASC4-201ENST00000299957 RAP1BP61224 184 aa11.97□□□□□ -0.49
CASC4-201ENST00000299957 RPS4XP62701 263 aaKnown RBP11.97□□□□□ -0.49
CASC4-201ENST00000299957 RAP1AP62834 184 aa11.97□□□□□ -0.49
CASC4-201ENST00000299957 PDZD11Q5EBL8 140 aa11.97□□□□□ -0.49
CASC4-201ENST00000299957 CBLN2Q8IUK8 224 aa11.97□□□□□ -0.49
CASC4-201ENST00000299957 OR1S2Q8NGQ3 325 aa11.97□□□□□ -0.49
CASC4-201ENST00000299957 OR52N5Q8NH56 324 aa11.97□□□□□ -0.49
CASC4-201ENST00000299957 ANGPTL6Q8NI99 470 aa11.97□□□□□ -0.49
CASC4-201ENST00000299957 FAM213BQ8TBF2 198 aa11.97□□□□□ -0.49
CASC4-201ENST00000299957 PHYHIPQ92561 330 aa11.97□□□□□ -0.49
CASC4-201ENST00000299957 VSTM2LQ96N03 204 aa11.97□□□□□ -0.49
CASC4-201ENST00000299957 MRPS18AQ9NVS2 196 aaKnown RBP11.97□□□□□ -0.49
CASC4-201ENST00000299957 OPN4Q9UHM6 478 aa11.97□□□□□ -0.49
CASC4-201ENST00000299957 FBXO7Q9Y3I1 522 aa11.97□□□□□ -0.49
CASC4-201ENST00000299957 TLCD2A6NGC4 264 aa11.96□□□□□ -0.49
CASC4-201ENST00000299957 S100A2P29034 98 aa11.96□□□□□ -0.49
CASC4-201ENST00000299957 RPS18P62269 152 aaKnown RBP11.96□□□□□ -0.49
CASC4-201ENST00000299957 GABREP78334 506 aa11.96□□□□□ -0.49
CASC4-201ENST00000299957 CDH26Q8IXH8 852 aa11.96□□□□□ -0.49
CASC4-201ENST00000299957 PHOSPHO2Q8TCD6 241 aa11.96□□□□□ -0.49
CASC4-201ENST00000299957 SECTM1Q8WVN6 248 aa11.96□□□□□ -0.49
CASC4-201ENST00000299957 C14orf79Q96F83 325 aa11.96□□□□□ -0.49
CASC4-201ENST00000299957 KCNJ15Q99712 375 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms