RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 OR13C7P0DN81 318 aa12.16□□□□□ -0.46
HPS3-201ENST00000296051 PLA2G7Q13093 441 aa12.16□□□□□ -0.46
HPS3-201ENST00000296051 DUSP8Q13202 625 aa12.16□□□□□ -0.46
HPS3-201ENST00000296051 EIF3IQ13347 325 aaKnown RBP12.16□□□□□ -0.46
HPS3-201ENST00000296051 GIMAP5Q96F15 307 aa12.16□□□□□ -0.46
HPS3-201ENST00000296051 GDF15Q99988 308 aa12.16□□□□□ -0.46
HPS3-201ENST00000296051 PURGQ9UJV8 347 aaKnown RBP12.16□□□□□ -0.46
HPS3-201ENST00000296051 SLC17A4Q9Y2C5 497 aa12.16□□□□□ -0.46
HPS3-201ENST00000296051 ZNF587BE7ETH6 402 aa12.16□□□□□ -0.46
HPS3-201ENST00000296051 IGF2P01344 180 aa12.16□□□□□ -0.46
HPS3-201ENST00000296051 GLAP06280 429 aa12.16□□□□□ -0.46
HPS3-201ENST00000296051 CD53P19397 219 aa12.16□□□□□ -0.46
HPS3-201ENST00000296051 ZP3P21754 424 aa12.16□□□□□ -0.46
HPS3-201ENST00000296051 RUNX2Q13950 521 aa12.16□□□□□ -0.46
HPS3-201ENST00000296051 CLINT1Q14677 625 aa12.16□□□□□ -0.46
HPS3-201ENST00000296051 ANGPTL5Q86XS5 388 aa12.16□□□□□ -0.46
HPS3-201ENST00000296051 ZNF547Q8IVP9 402 aa12.16□□□□□ -0.46
HPS3-201ENST00000296051 MORN4Q8NDC4 146 aa12.16□□□□□ -0.46
HPS3-201ENST00000296051 APH1AQ96BI3 265 aa12.16□□□□□ -0.46
HPS3-201ENST00000296051 RAB3CQ96E17 227 aa12.16□□□□□ -0.46
HPS3-201ENST00000296051 ZNF75AQ96N20 296 aa12.16□□□□□ -0.46
HPS3-201ENST00000296051 ZNF578Q96N58 590 aaPredicted RBP12.16□□□□□ -0.46
HPS3-201ENST00000296051 TRAV20A0A0B4J274 112 aa12.16□□□□□ -0.46
HPS3-201ENST00000296051 PLPP2O43688 288 aa12.16□□□□□ -0.46
HPS3-201ENST00000296051 EIF1BO60739 113 aaKnown RBP12.16□□□□□ -0.46
HPS3-201ENST00000296051 BPNT1O95861 308 aa12.16□□□□□ -0.46
HPS3-201ENST00000296051 IDH3GP51553 393 aaPredicted RBP12.16□□□□□ -0.46
HPS3-201ENST00000296051 TAS2R31P59538 309 aa12.16□□□□□ -0.46
HPS3-201ENST00000296051 NKX6-1P78426 367 aaPredicted RBP12.16□□□□□ -0.46
HPS3-201ENST00000296051 C19orf57Q0VDD7 668 aa12.16□□□□□ -0.46
HPS3-201ENST00000296051 SLC16A9Q7RTY1 509 aa12.16□□□□□ -0.46
HPS3-201ENST00000296051 ZNF610Q8N9Z0 462 aa12.16□□□□□ -0.46
HPS3-201ENST00000296051 SUMF2Q8NBJ7 301 aa12.16□□□□□ -0.46
HPS3-201ENST00000296051 SCGB1C1Q8TD33 95 aa12.16□□□□□ -0.46
HPS3-201ENST00000296051 IL1F10Q8WWZ1 152 aa12.16□□□□□ -0.46
HPS3-201ENST00000296051 TRIB1Q96RU8 372 aa12.16□□□□□ -0.46
HPS3-201ENST00000296051 DUSP22Q9NRW4 184 aa12.16□□□□□ -0.46
HPS3-201ENST00000296051 TNFSF14O43557 240 aa12.16□□□□□ -0.46
HPS3-201ENST00000296051 CHRNB4P30926 498 aa12.16□□□□□ -0.46
HPS3-201ENST00000296051 TRILQ7L0X0 811 aa12.16□□□□□ -0.46
HPS3-201ENST00000296051 ADGRG3Q86Y34 549 aa12.16□□□□□ -0.46
HPS3-201ENST00000296051 FAM219AQ8IW50 185 aa12.16□□□□□ -0.46
HPS3-201ENST00000296051 LINC01555Q8NAE3 123 aa12.16□□□□□ -0.46
HPS3-201ENST00000296051 MIB2Q96AX9 1013 aa12.16□□□□□ -0.46
HPS3-201ENST00000296051 SORCS2Q96PQ0 1159 aa12.16□□□□□ -0.46
HPS3-201ENST00000296051 CNTNAP3Q9BZ76 1288 aa12.16□□□□□ -0.46
HPS3-201ENST00000296051 TGIF2Q9GZN2 237 aa12.16□□□□□ -0.46
HPS3-201ENST00000296051 CTSFQ9UBX1 484 aa12.16□□□□□ -0.46
HPS3-201ENST00000296051 COA3Q9Y2R0 106 aaPredicted RBP12.16□□□□□ -0.46
HPS3-201ENST00000296051 LSM2Q9Y333 95 aaKnown RBP12.16□□□□□ -0.46
HPS3-201ENST00000296051 GPR31O00270 319 aa12.15□□□□□ -0.46
HPS3-201ENST00000296051 OLFM2O95897 454 aa12.15□□□□□ -0.46
HPS3-201ENST00000296051 NDUFA6P56556 154 aa12.15□□□□□ -0.46
HPS3-201ENST00000296051 PCBP4P57723 403 aaKnown RBP12.15□□□□□ -0.46
HPS3-201ENST00000296051 IL10RAQ13651 578 aa12.15□□□□□ -0.46
HPS3-201ENST00000296051 LTC4SQ16873 150 aa12.15□□□□□ -0.46
HPS3-201ENST00000296051 ACOT7LQ6ZUV0 252 aa12.15□□□□□ -0.46
HPS3-201ENST00000296051 SUMF1Q8NBK3 374 aa12.15□□□□□ -0.46
HPS3-201ENST00000296051 BPIFCQ8NFQ6 507 aa12.15□□□□□ -0.46
HPS3-201ENST00000296051 ZPBPQ9BS86 351 aa12.15□□□□□ -0.46
HPS3-201ENST00000296051 LYRM4Q9HD34 91 aa12.15□□□□□ -0.46
HPS3-201ENST00000296051 P4HTMQ9NXG6 502 aa12.15□□□□□ -0.46
HPS3-201ENST00000296051 HOXC8P31273 242 aa12.15□□□□□ -0.46
HPS3-201ENST00000296051 DEFA6Q01524 100 aa12.15□□□□□ -0.46
HPS3-201ENST00000296051 PLCXD3Q63HM9 321 aa12.15□□□□□ -0.46
HPS3-201ENST00000296051 OR52W1Q6IF63 320 aa12.15□□□□□ -0.46
HPS3-201ENST00000296051 RNF165Q6ZSG1 346 aa12.15□□□□□ -0.46
HPS3-201ENST00000296051 FAM57BQ71RH2 274 aa12.15□□□□□ -0.46
HPS3-201ENST00000296051 BATF2Q8N1L9 274 aa12.15□□□□□ -0.46
HPS3-201ENST00000296051 OR52H1Q8NGJ2 320 aa12.15□□□□□ -0.46
HPS3-201ENST00000296051 PTP4A1Q93096 173 aa12.15□□□□□ -0.46
HPS3-201ENST00000296051 TMEM59Q9BXS4 323 aa12.15□□□□□ -0.46
HPS3-201ENST00000296051 CRLF2Q9HC73 371 aa12.15□□□□□ -0.46
HPS3-201ENST00000296051 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.15□□□□□ -0.46
HPS3-201ENST00000296051 PRDM7Q9NQW5 492 aa12.15□□□□□ -0.46
HPS3-201ENST00000296051 OR5V1Q9UGF6 321 aa12.15□□□□□ -0.46
HPS3-201ENST00000296051 FBXO7Q9Y3I1 522 aa12.15□□□□□ -0.46
HPS3-201ENST00000296051 MYOFQ9NZM1 2061 aa12.15□□□□□ -0.46
HPS3-201ENST00000296051 CDK2AP1O14519 115 aa12.15□□□□□ -0.46
HPS3-201ENST00000296051 AKR7A3O95154 331 aa12.15□□□□□ -0.46
HPS3-201ENST00000296051 SLC34A2O95436 690 aa12.15□□□□□ -0.46
HPS3-201ENST00000296051 CALCBP10092 127 aa12.15□□□□□ -0.46
HPS3-201ENST00000296051 BLVRBP30043 206 aaPredicted RBP12.15□□□□□ -0.46
HPS3-201ENST00000296051 DCXRQ7Z4W1 244 aa12.15□□□□□ -0.46
HPS3-201ENST00000296051 KMT5CQ86Y97 462 aa12.15□□□□□ -0.46
HPS3-201ENST00000296051 WFDC8Q8IUA0 241 aa12.15□□□□□ -0.46
HPS3-201ENST00000296051 SYS1Q8N2H4 156 aa12.15□□□□□ -0.46
HPS3-201ENST00000296051 BHLHE23Q8NDY6 225 aa12.15□□□□□ -0.46
HPS3-201ENST00000296051 OR2G2Q8NGZ5 317 aa12.15□□□□□ -0.46
HPS3-201ENST00000296051 MARCH1Q8TCQ1 289 aa12.15□□□□□ -0.46
HPS3-201ENST00000296051 GLYATL2Q8WU03 294 aa12.15□□□□□ -0.46
HPS3-201ENST00000296051 HSD17B8Q92506 261 aa12.15□□□□□ -0.46
HPS3-201ENST00000296051 PHYHIPQ92561 330 aa12.15□□□□□ -0.46
HPS3-201ENST00000296051 EVA1AQ9H8M9 152 aa12.15□□□□□ -0.46
HPS3-201ENST00000296051 COL24A1Q17RW2 1714 aa12.15□□□□□ -0.47
HPS3-201ENST00000296051 A0A087WV62 115 aa12.14□□□□□ -0.47
HPS3-201ENST00000296051 A0A1W2PNR3 127 aa12.14□□□□□ -0.47
HPS3-201ENST00000296051 SNRPGP15A8MWD9 76 aa12.14□□□□□ -0.47
HPS3-201ENST00000296051 NME2P1O60361 137 aa12.14□□□□□ -0.47
HPS3-201ENST00000296051 GLSO94925 669 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms