RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 OR1J1Q8NGS3 322 aa10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 TM4SF18Q96CE8 201 aa10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 LMF2Q9BU23 707 aaKnown RBP10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 SERTAD4Q9NUC0 356 aa10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 BRWD1Q9NSI6 2320 aa10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 H7C1C5 153 aa10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 CD3DP04234 171 aa10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 SMIM6P0DI80 62 aa10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 CALCBP10092 127 aa10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 CD37P11049 281 aa10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 EIF1P41567 113 aaKnown RBP10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 LCN6P62502 163 aa10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 MFGE8Q08431 387 aaPredicted RBP10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 CYHR1Q6ZMK1 362 aa10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 FGF11Q92914 225 aa10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 PLEKHA3Q9HB20 300 aa10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 FGF20Q9NP95 211 aaPredicted RBP10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 SLC6A13Q9NSD5 602 aa10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 GPR55Q9Y2T6 319 aaPredicted RBP10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 ASCC3Q8N3C0 2202 aaKnown RBP10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 MCRIP1C9JLW8 97 aa10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 UPK1AO00322 258 aa10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 CYB5BO43169 146 aa10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 EFEMP2O95967 443 aa10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 ZNF74Q16587 644 aa10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 RSPO4Q2I0M5 234 aaPredicted RBP10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 VWA2Q5GFL6 755 aa10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 ZNF836Q6ZNA1 936 aa10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 CA13Q8N1Q1 262 aa10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 SIRT6Q8N6T7 355 aa10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 ENKD1Q9H0I2 346 aa10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 V9GYH0 126 aa10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 CD300LBA8K4G0 201 aa10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 RNASEK-C17orf49H0YIS7 233 aa10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 PLA2G10O15496 165 aa10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 DOK2O60496 412 aa10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 JTBO76095 146 aa10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 PNPP00491 289 aa10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 WNT1P04628 370 aa10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 CELA2BP08218 269 aaPredicted RBP10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 F2RL1P55085 397 aa10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 RPS18P62269 152 aaKnown RBP10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 GSG1Q2KHT4 349 aa10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 VSX1Q9NZR4 365 aaPredicted RBP10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 KLHL13Q9P2N7 655 aa10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 GNG13Q9P2W3 67 aa10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 ZFP92A6NM28 416 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 IFITM5A6NNB3 132 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 BET1O15155 118 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 FGF9P31371 208 aaPredicted RBP10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 CAMK2DQ13557 499 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 C5orf46Q6UWT4 87 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 DERL3Q96Q80 235 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 LRFN3Q9BTN0 628 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 ISG20L2Q9H9L3 353 aaKnown RBP10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 GCM1Q9NP62 436 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 PCOLCE2Q9UKZ9 415 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 TRAV17A0A0B4J275 112 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 RFPL4AA6NLU0 287 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 RFPL4AL1F8VTS6 287 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 GPR137BO60478 399 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 FABP4P15090 132 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 FOLR1P15328 257 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 TAS2R30P59541 319 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 MESP2Q0VG99 397 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 ZNF266Q14584 549 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 HAGHQ16775 308 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 ISXQ2M1V0 245 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 OR52W1Q6IF63 320 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 NIPAL3Q6P499 406 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 CNEP1R1Q8N9A8 125 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 FAM71CQ8NEG0 241 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 NEU3Q9UQ49 428 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 MMP24Q9Y5R2 645 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 PRAMEF25A6NGN4 478 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 B4E171 279 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 SFTA3P0C7M3 94 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 RAB4AP20338 218 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 TSPAN7P41732 249 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 SCN5AQ14524 2016 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 TESK1Q15569 626 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 PRAMEF20Q5VT98 475 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 FAM71E1Q6IPT2 247 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 TRILQ7L0X0 811 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 CALHM3Q86XJ0 350 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 TMEM217Q8N7C4 229 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 OR4C16Q8NGL9 310 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 OR2G3Q8NGZ4 309 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 SARAFQ96BY9 339 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 ZNF681Q96N22 645 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 SPAG17Q6Q759 2223 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 KDM4EB2RXH2 506 aaPredicted RBP10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 SELENOFO60613 162 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 IL5P05113 134 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 EPXP11678 715 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 PAX6P26367 422 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 DPP4P27487 766 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 SLC6A1P30531 599 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 KCNJ3P48549 501 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms