RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 HMSDA8MTL9 139 aa14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 EIF4E2O60573 245 aaKnown RBP14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 ENPP1P22413 925 aa14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 TNFSF4P23510 183 aa14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 FCGR2CP31995 323 aa14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 CASP6P55212 293 aa14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 PLPP6Q8IY26 295 aa14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 OR2L13Q8N349 312 aa14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 SLAMF6Q96DU3 332 aa14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 CNRIP1Q96F85 164 aaPredicted RBP14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 PHYHIPLQ96FC7 376 aa14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 CXorf58Q96LI9 332 aa14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 MYOTQ9UBF9 498 aa14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 V9GYH0 126 aa14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 OR5K3A6NET4 321 aa14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 H7BYZ3 331 aa14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 AP4M1O00189 453 aa14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 EIF1BO60739 113 aaKnown RBP14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 IGHV3-9P01782 118 aa14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 TUSC1Q2TAM9 212 aa14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 B3GNTL1Q67FW5 361 aaPredicted RBP14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 WDR88Q6ZMY6 472 aa14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 EDEM2Q9BV94 578 aa14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 MMP26Q9NRE1 261 aa14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 MRPL22Q9NWU5 206 aaKnown RBP14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 CTSFQ9UBX1 484 aa14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 NINQ8N4C6 2090 aa14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 TCRBV16S1A1N1A0A5B0 115 aa14.96□□□□□ -0.01
SH3RF1-201ENST00000284637 FAM199XQ6PEV8 388 aaPredicted RBP14.96□□□□□ -0.01
SH3RF1-201ENST00000284637 SIRT6Q8N6T7 355 aa14.96□□□□□ -0.01
SH3RF1-201ENST00000284637 AKR1E2Q96JD6 320 aa14.96□□□□□ -0.01
SH3RF1-201ENST00000284637 CLN5O75503 358 aa14.96□□□□□ -0.01
SH3RF1-201ENST00000284637 SDHBP21912 280 aa14.96□□□□□ -0.01
SH3RF1-201ENST00000284637 HSF1Q00613 529 aa14.96□□□□□ -0.01
SH3RF1-201ENST00000284637 MZT1Q08AG7 82 aa14.96□□□□□ -0.01
SH3RF1-201ENST00000284637 DOK3Q7L591 496 aa14.96□□□□□ -0.01
SH3RF1-201ENST00000284637 OR51A2Q8NGJ7 313 aa14.96□□□□□ -0.01
SH3RF1-201ENST00000284637 HEYLQ9NQ87 328 aaPredicted RBP14.96□□□□□ -0.01
SH3RF1-201ENST00000284637 CHRNA9Q9UGM1 479 aa14.96□□□□□ -0.01
SH3RF1-201ENST00000284637 EVPLQ92817 2033 aa14.96□□□□□ -0.01
SH3RF1-201ENST00000284637 RAB27BO00194 218 aa14.96□□□□□ -0.01
SH3RF1-201ENST00000284637 ZNF749O43361 778 aa14.96□□□□□ -0.01
SH3RF1-201ENST00000284637 EIF1P41567 113 aaKnown RBP14.96□□□□□ -0.01
SH3RF1-201ENST00000284637 TM4SF4P48230 202 aa14.96□□□□□ -0.01
SH3RF1-201ENST00000284637 P2RX1P51575 399 aa14.96□□□□□ -0.01
SH3RF1-201ENST00000284637 MSRB3Q8IXL7 192 aa14.96□□□□□ -0.01
SH3RF1-201ENST00000284637 TMEM123Q8N131 208 aa14.96□□□□□ -0.01
SH3RF1-201ENST00000284637 OR4C16Q8NGL9 310 aa14.96□□□□□ -0.01
SH3RF1-201ENST00000284637 MARCH1Q8TCQ1 289 aa14.96□□□□□ -0.01
SH3RF1-201ENST00000284637 MS4A7Q9GZW8 240 aaPredicted RBP14.96□□□□□ -0.01
SH3RF1-201ENST00000284637 KCNG2Q9UJ96 466 aa14.96□□□□□ -0.01
SH3RF1-201ENST00000284637 PPM1DO15297 605 aa14.96□□□□□ -0.02
SH3RF1-201ENST00000284637 HRH1P35367 487 aa14.96□□□□□ -0.02
SH3RF1-201ENST00000284637 OPRM1P35372 400 aa14.96□□□□□ -0.02
SH3RF1-201ENST00000284637 C4orf17Q53FE4 359 aa14.96□□□□□ -0.02
SH3RF1-201ENST00000284637 ZNF628Q5EBL2 1059 aa14.96□□□□□ -0.02
SH3RF1-201ENST00000284637 VN1R2Q8NFZ6 395 aa14.96□□□□□ -0.02
SH3RF1-201ENST00000284637 STT3BQ8TCJ2 826 aa14.96□□□□□ -0.02
SH3RF1-201ENST00000284637 ZFPM2Q8WW38 1151 aa14.96□□□□□ -0.02
SH3RF1-201ENST00000284637 AK3Q9UIJ7 227 aa14.96□□□□□ -0.02
SH3RF1-201ENST00000284637 FLVCR1Q9Y5Y0 555 aa14.96□□□□□ -0.02
SH3RF1-201ENST00000284637 PRAMEF25A6NGN4 478 aa14.95□□□□□ -0.02
SH3RF1-201ENST00000284637 LBX1P52954 281 aa14.95□□□□□ -0.02
SH3RF1-201ENST00000284637 BTG2P78543 158 aa14.95□□□□□ -0.02
SH3RF1-201ENST00000284637 DPTQ07507 201 aa14.95□□□□□ -0.02
SH3RF1-201ENST00000284637 C11orf87Q6NUJ2 197 aa14.95□□□□□ -0.02
SH3RF1-201ENST00000284637 RPUSD3Q6P087 351 aaKnown RBP14.95□□□□□ -0.02
SH3RF1-201ENST00000284637 TMEM65Q6PI78 240 aa14.95□□□□□ -0.02
SH3RF1-201ENST00000284637 AGBL5Q8NDL9 886 aa14.95□□□□□ -0.02
SH3RF1-201ENST00000284637 GOT1L1Q8NHS2 421 aaPredicted RBP14.95□□□□□ -0.02
SH3RF1-201ENST00000284637 CABLES2Q9BTV7 478 aa14.95□□□□□ -0.02
SH3RF1-201ENST00000284637 V9GYS6 101 aa14.95□□□□□ -0.02
SH3RF1-201ENST00000284637 NUP214P35658 2090 aaPredicted RBP14.95□□□□□ -0.02
SH3RF1-201ENST00000284637 A0A087X0M5 115 aa14.95□□□□□ -0.02
SH3RF1-201ENST00000284637 A0A1B0GX30 115 aa14.95□□□□□ -0.02
SH3RF1-201ENST00000284637 FZD6O60353 706 aa14.95□□□□□ -0.02
SH3RF1-201ENST00000284637 TMEM127O75204 238 aa14.95□□□□□ -0.02
SH3RF1-201ENST00000284637 CD22P20273 847 aa14.95□□□□□ -0.02
SH3RF1-201ENST00000284637 HABP2Q14520 560 aaPredicted RBP14.95□□□□□ -0.02
SH3RF1-201ENST00000284637 KCNAB1Q14722 419 aa14.95□□□□□ -0.02
SH3RF1-201ENST00000284637 MED9Q9NWA0 146 aa14.95□□□□□ -0.02
SH3RF1-201ENST00000284637 PLEKHB1Q9UF11 243 aaPredicted RBP14.95□□□□□ -0.02
SH3RF1-201ENST00000284637 A0A1B0GUL6 1792 aa14.95□□□□□ -0.02
SH3RF1-201ENST00000284637 FAM221AA4D161 298 aa14.95□□□□□ -0.02
SH3RF1-201ENST00000284637 GPR31O00270 319 aa14.95□□□□□ -0.02
SH3RF1-201ENST00000284637 FABP4P15090 132 aa14.95□□□□□ -0.02
SH3RF1-201ENST00000284637 TRILQ7L0X0 811 aa14.95□□□□□ -0.02
SH3RF1-201ENST00000284637 SYT13Q7L8C5 426 aa14.95□□□□□ -0.02
SH3RF1-201ENST00000284637 PHOSPHO2Q8TCD6 241 aa14.95□□□□□ -0.02
SH3RF1-201ENST00000284637 SIGLEC11Q96RL6 698 aa14.95□□□□□ -0.02
SH3RF1-201ENST00000284637 TAF1P21675 1872 aa14.95□□□□□ -0.02
SH3RF1-201ENST00000284637 TMEM218A2RU14 115 aa14.95□□□□□ -0.02
SH3RF1-201ENST00000284637 DUSP1P28562 367 aa14.95□□□□□ -0.02
SH3RF1-201ENST00000284637 RPL12P30050 165 aaKnown RBP14.95□□□□□ -0.02
SH3RF1-201ENST00000284637 PRO1933Q9H354 126 aa14.95□□□□□ -0.02
SH3RF1-201ENST00000284637 ZNF230Q9UIE0 474 aaPredicted RBP14.95□□□□□ -0.02
SH3RF1-201ENST00000284637 TIMM8AO60220 97 aaPredicted RBP14.94□□□□□ -0.02
SH3RF1-201ENST00000284637 B4GALNT1Q00973 533 aa14.94□□□□□ -0.02
SH3RF1-201ENST00000284637 ELAVL1Q15717 326 aaKnown RBP14.94□□□□□ -0.02
SH3RF1-201ENST00000284637 ZNF77Q15935 545 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms