RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 SAMD12Q8N8I0 201 aa9.69□□□□□ -0.86
GGPS1-201ENST00000282841 ZFP62Q8NB50 900 aaPredicted RBP9.69□□□□□ -0.86
GGPS1-201ENST00000282841 ADPRHL1Q8NDY3 354 aa9.69□□□□□ -0.86
GGPS1-201ENST00000282841 SDHCQ99643 169 aaPredicted RBP9.69□□□□□ -0.86
GGPS1-201ENST00000282841 GAL3ST1Q99999 423 aa9.69□□□□□ -0.86
GGPS1-201ENST00000282841 PAQR5Q9NXK6 330 aaPredicted RBP9.69□□□□□ -0.86
GGPS1-201ENST00000282841 ZNF319Q9P2F9 582 aa9.69□□□□□ -0.86
GGPS1-201ENST00000282841 PEX16Q9Y5Y5 336 aa9.69□□□□□ -0.86
GGPS1-201ENST00000282841 F5H5K5 113 aa9.68□□□□□ -0.86
GGPS1-201ENST00000282841 SSX4O60224 188 aa9.68□□□□□ -0.86
GGPS1-201ENST00000282841 RAB3BP20337 219 aa9.68□□□□□ -0.86
GGPS1-201ENST00000282841 SDHBP21912 280 aa9.68□□□□□ -0.86
GGPS1-201ENST00000282841 APEX1P27695 318 aaKnown RBP9.68□□□□□ -0.86
GGPS1-201ENST00000282841 TAF13Q15543 124 aa9.68□□□□□ -0.86
GGPS1-201ENST00000282841 HIST3H3Q16695 136 aa9.68□□□□□ -0.86
GGPS1-201ENST00000282841 GCNT2Q8N0V5 402 aa9.68□□□□□ -0.86
GGPS1-201ENST00000282841 OR2AJ1Q8NGZ0 328 aa9.68□□□□□ -0.86
GGPS1-201ENST00000282841 FGFBP3Q8TAT2 258 aa9.68□□□□□ -0.86
GGPS1-201ENST00000282841 RNF128Q8TEB7 428 aa9.68□□□□□ -0.86
GGPS1-201ENST00000282841 ST8SIA2Q92186 375 aa9.68□□□□□ -0.86
GGPS1-201ENST00000282841 ITPR1Q14643 2758 aa9.68□□□□□ -0.86
GGPS1-201ENST00000282841 TRAV20A0A0B4J274 112 aa9.68□□□□□ -0.86
GGPS1-201ENST00000282841 DHHO43323 396 aa9.68□□□□□ -0.86
GGPS1-201ENST00000282841 NDUFA2O43678 99 aa9.68□□□□□ -0.86
GGPS1-201ENST00000282841 ADRA2CP18825 462 aa9.68□□□□□ -0.86
GGPS1-201ENST00000282841 ELK1P19419 428 aa9.68□□□□□ -0.86
GGPS1-201ENST00000282841 FKBP2P26885 142 aaKnown RBP9.68□□□□□ -0.86
GGPS1-201ENST00000282841 PLA2G7Q13093 441 aa9.68□□□□□ -0.86
GGPS1-201ENST00000282841 ZNF79Q15937 498 aa9.68□□□□□ -0.86
GGPS1-201ENST00000282841 BAK1Q16611 211 aa9.68□□□□□ -0.86
GGPS1-201ENST00000282841 TSPO2Q5TGU0 170 aa9.68□□□□□ -0.86
GGPS1-201ENST00000282841 STEAP3Q658P3 488 aa9.68□□□□□ -0.86
GGPS1-201ENST00000282841 CNIH2Q6PI25 160 aa9.68□□□□□ -0.86
GGPS1-201ENST00000282841 CCDC190Q86UF4 302 aa9.68□□□□□ -0.86
GGPS1-201ENST00000282841 SLC22A16Q86VW1 577 aa9.68□□□□□ -0.86
GGPS1-201ENST00000282841 COMMD2Q86X83 199 aa9.68□□□□□ -0.86
GGPS1-201ENST00000282841 SERPINA12Q8IW75 414 aa9.68□□□□□ -0.86
GGPS1-201ENST00000282841 IL17RDQ8NFM7 739 aa9.68□□□□□ -0.86
GGPS1-201ENST00000282841 SNX18Q96RF0 628 aa9.68□□□□□ -0.86
GGPS1-201ENST00000282841 WDR12Q9GZL7 423 aaKnown RBP9.68□□□□□ -0.86
GGPS1-201ENST00000282841 CACNG2Q9Y698 323 aa9.68□□□□□ -0.86
GGPS1-201ENST00000282841 V9GYH0 126 aa9.68□□□□□ -0.86
GGPS1-201ENST00000282841 MYO7BQ6PIF6 2116 aa9.67□□□□□ -0.86
GGPS1-201ENST00000282841 NPIPB13A6NJU9 1138 aa9.67□□□□□ -0.86
GGPS1-201ENST00000282841 ZNF891A8MT65 544 aaPredicted RBP9.67□□□□□ -0.86
GGPS1-201ENST00000282841 FAM25AB3EWG3 89 aa9.67□□□□□ -0.86
GGPS1-201ENST00000282841 FAM25CB3EWG5 89 aa9.67□□□□□ -0.86
GGPS1-201ENST00000282841 FAM25GB3EWG6 89 aa9.67□□□□□ -0.86
GGPS1-201ENST00000282841 NPIPB4C9JG80 1138 aa9.67□□□□□ -0.86
GGPS1-201ENST00000282841 KRT33AO76009 404 aa9.67□□□□□ -0.86
GGPS1-201ENST00000282841 ADRB1P08588 477 aa9.67□□□□□ -0.86
GGPS1-201ENST00000282841 ZNF708P17019 499 aa9.67□□□□□ -0.86
GGPS1-201ENST00000282841 CEACAM16Q2WEN9 425 aa9.67□□□□□ -0.86
GGPS1-201ENST00000282841 ASPHD2Q6ICH7 369 aa9.67□□□□□ -0.86
GGPS1-201ENST00000282841 FAM109AQ8N4B1 249 aa9.67□□□□□ -0.86
GGPS1-201ENST00000282841 FBXO17Q96EF6 278 aa9.67□□□□□ -0.86
GGPS1-201ENST00000282841 MRPL48Q96GC5 212 aaKnown RBP9.67□□□□□ -0.86
GGPS1-201ENST00000282841 C1orf198Q9H425 327 aa9.67□□□□□ -0.86
GGPS1-201ENST00000282841 KLHL9Q9P2J3 617 aa9.67□□□□□ -0.86
GGPS1-201ENST00000282841 COL12A1Q99715 3063 aa9.67□□□□□ -0.86
GGPS1-201ENST00000282841 TRGV5A0A0B4J1U4 118 aa9.67□□□□□ -0.86
GGPS1-201ENST00000282841 FABP12A6NFH5 140 aa9.67□□□□□ -0.86
GGPS1-201ENST00000282841 OR6C65A6NJZ3 312 aa9.67□□□□□ -0.86
GGPS1-201ENST00000282841 ERVH48-1M5A8F1 160 aa9.67□□□□□ -0.86
GGPS1-201ENST00000282841 VAMP5O95183 116 aa9.67□□□□□ -0.86
GGPS1-201ENST00000282841 EIF4EP06730 217 aaKnown RBP9.67□□□□□ -0.86
GGPS1-201ENST00000282841 UCHL1P09936 223 aa9.67□□□□□ -0.86
GGPS1-201ENST00000282841 THBS2P35442 1172 aa9.67□□□□□ -0.86
GGPS1-201ENST00000282841 MTNR1BP49286 362 aa9.67□□□□□ -0.86
GGPS1-201ENST00000282841 PPP5CP53041 499 aa9.67□□□□□ -0.86
GGPS1-201ENST00000282841 ROM1Q03395 351 aa9.67□□□□□ -0.86
GGPS1-201ENST00000282841 C3P1Q6ZMU1 363 aa9.67□□□□□ -0.86
GGPS1-201ENST00000282841 PLPP7Q8NBV4 271 aa9.67□□□□□ -0.86
GGPS1-201ENST00000282841 OR51A2Q8NGJ7 313 aa9.67□□□□□ -0.86
GGPS1-201ENST00000282841 AKR7LQ8NHP1 331 aa9.67□□□□□ -0.86
GGPS1-201ENST00000282841 S100ZQ8WXG8 99 aa9.67□□□□□ -0.86
GGPS1-201ENST00000282841 GCDHQ92947 438 aaPredicted RBP9.67□□□□□ -0.86
GGPS1-201ENST00000282841 TAAR6Q96RI8 345 aa9.67□□□□□ -0.86
GGPS1-201ENST00000282841 MED18Q9BUE0 208 aa9.67□□□□□ -0.86
GGPS1-201ENST00000282841 COMMD4Q9H0A8 199 aa9.67□□□□□ -0.86
GGPS1-201ENST00000282841 LIN7BQ9HAP6 207 aa9.67□□□□□ -0.86
GGPS1-201ENST00000282841 FOXD3Q9UJU5 478 aaPredicted RBP9.67□□□□□ -0.86
GGPS1-201ENST00000282841 OR52A1Q9UKL2 312 aa9.67□□□□□ -0.86
GGPS1-201ENST00000282841 A0A075B6Q4 140 aa9.66□□□□□ -0.86
GGPS1-201ENST00000282841 IQCMA0A1B0GVH7 501 aa9.66□□□□□ -0.86
GGPS1-201ENST00000282841 SFTPCP11686 197 aa9.66□□□□□ -0.86
GGPS1-201ENST00000282841 HSD11B1P28845 292 aa9.66□□□□□ -0.86
GGPS1-201ENST00000282841 GUCA1AP43080 201 aaPredicted RBP9.66□□□□□ -0.86
GGPS1-201ENST00000282841 SLC6A9P48067 706 aa9.66□□□□□ -0.86
GGPS1-201ENST00000282841 Q499Y3 187 aa9.66□□□□□ -0.86
GGPS1-201ENST00000282841 SFRP5Q5T4F7 317 aa9.66□□□□□ -0.86
GGPS1-201ENST00000282841 DDI2Q5TDH0 399 aa9.66□□□□□ -0.86
GGPS1-201ENST00000282841 NUFIP2Q7Z417 695 aaKnown RBP9.66□□□□□ -0.86
GGPS1-201ENST00000282841 RNF144BQ7Z419 303 aa9.66□□□□□ -0.86
GGPS1-201ENST00000282841 LUZP2Q86TE4 346 aa9.66□□□□□ -0.86
GGPS1-201ENST00000282841 CCDC36Q8IYA8 594 aa9.66□□□□□ -0.86
GGPS1-201ENST00000282841 TMEM178AQ8NBL3 297 aa9.66□□□□□ -0.86
GGPS1-201ENST00000282841 RNF133Q8WVZ7 376 aa9.66□□□□□ -0.86
GGPS1-201ENST00000282841 ASB17Q8WXJ9 295 aa9.66□□□□□ -0.86
GGPS1-201ENST00000282841 TMEM54Q969K7 222 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms