RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 ADRA2CP18825 462 aa8.29□□□□□ -1.08
PDGFC-201ENST00000274071 NDUFV2P19404 249 aa8.29□□□□□ -1.08
PDGFC-201ENST00000274071 TEAD1P28347 426 aa8.29□□□□□ -1.08
PDGFC-201ENST00000274071 GLIPR1P48060 266 aa8.29□□□□□ -1.08
PDGFC-201ENST00000274071 ZP2Q05996 745 aa8.29□□□□□ -1.08
PDGFC-201ENST00000274071 ZNF763Q0D2J5 394 aa8.29□□□□□ -1.08
PDGFC-201ENST00000274071 PDE7AQ13946 482 aa8.29□□□□□ -1.08
PDGFC-201ENST00000274071 ANKRD16Q6P6B7 361 aa8.29□□□□□ -1.08
PDGFC-201ENST00000274071 PRSS54Q6PEW0 395 aa8.29□□□□□ -1.08
PDGFC-201ENST00000274071 MED25Q71SY5 747 aa8.29□□□□□ -1.08
PDGFC-201ENST00000274071 METTL27Q8N6F8 245 aaPredicted RBP8.29□□□□□ -1.08
PDGFC-201ENST00000274071 MFSD9Q8NBP5 474 aa8.29□□□□□ -1.08
PDGFC-201ENST00000274071 SCAMP5Q8TAC9 235 aa8.29□□□□□ -1.08
PDGFC-201ENST00000274071 DNASE2BQ8WZ79 361 aa8.29□□□□□ -1.08
PDGFC-201ENST00000274071 EID2BQ96D98 161 aa8.29□□□□□ -1.08
PDGFC-201ENST00000274071 RARRES2Q99969 163 aa8.29□□□□□ -1.08
PDGFC-201ENST00000274071 METTL8Q9H825 291 aaKnown RBP8.29□□□□□ -1.08
PDGFC-201ENST00000274071 SLC22A31A6NKX4 558 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 ANKRD66B4E2M5 251 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 RAB27BO00194 218 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 EIF1AYO14602 144 aaKnown RBP8.28□□□□□ -1.08
PDGFC-201ENST00000274071 TMEM127O75204 238 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 NDUFB8O95169 186 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 VAMP5O95183 116 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 CST4P01036 141 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 CSTBP04080 98 aaKnown RBP8.28□□□□□ -1.08
PDGFC-201ENST00000274071 ZGLP1P0C6A0 271 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 MDKP21741 143 aaPredicted RBP8.28□□□□□ -1.08
PDGFC-201ENST00000274071 CST5P28325 142 aaPredicted RBP8.28□□□□□ -1.08
PDGFC-201ENST00000274071 EIF1AXP47813 144 aaKnown RBP8.28□□□□□ -1.08
PDGFC-201ENST00000274071 GABRA4P48169 554 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 TAS2R41P59536 307 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 PFN3P60673 137 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 Q5PR19 223 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 IER5LQ5T953 404 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 STAC2Q6ZMT1 411 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 MBOAT2Q6ZWT7 520 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 ZNF683Q8IZ20 524 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 OR4X1Q8NH49 305 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 GPX8Q8TED1 209 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 ANKRD9Q96BM1 317 aaPredicted RBP8.28□□□□□ -1.08
PDGFC-201ENST00000274071 NEURL3Q96EH8 262 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 HHIPL1Q96JK4 782 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 CDC6Q99741 560 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 SLC6A7Q99884 636 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 SGPP1Q9BX95 441 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 BRF2Q9HAW0 419 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 FOXD3Q9UJU5 478 aaPredicted RBP8.28□□□□□ -1.08
PDGFC-201ENST00000274071 DKKL1Q9UK85 242 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 RNF150Q9ULK6 438 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 TMED7Q9Y3B3 224 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 PLXNA4Q9HCM2 1894 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 OR4C45A6NMZ5 311 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 RAMP2O60895 175 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 B4GALT2O60909 372 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 CSN2P05814 226 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 LYL1P12980 280 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 NAA10P41227 235 aaPredicted RBP8.28□□□□□ -1.08
PDGFC-201ENST00000274071 UBE2V1Q13404 147 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 EIF2B1Q14232 305 aaKnown RBP8.28□□□□□ -1.08
PDGFC-201ENST00000274071 RPUSD3Q6P087 351 aaKnown RBP8.28□□□□□ -1.08
PDGFC-201ENST00000274071 NRMQ8IXM6 262 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 KLK6Q92876 244 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 ZNF845Q96IR2 970 aaPredicted RBP8.28□□□□□ -1.08
PDGFC-201ENST00000274071 SLC35E1Q96K37 410 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 MIEN1Q9BRT3 115 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 SLC26A1Q9H2B4 701 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 SGK2Q9HBY8 427 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 SLC17A5Q9NRA2 495 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 RAB22AQ9UL26 194 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 DYRK1BQ9Y463 629 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 PPIAL4AQ9Y536 164 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 KIF26AQ9ULI4 1882 aaPredicted RBP8.28□□□□□ -1.08
PDGFC-201ENST00000274071 PLXNA3P51805 1871 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 A8MVM7 634 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 H0YL77 283 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 TAAR5O14804 337 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 KLF4O43474 513 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 PRAMEF11O60813 436 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 ERAL1O75616 437 aaKnown RBP8.28□□□□□ -1.08
PDGFC-201ENST00000274071 PIAS2O75928 621 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 HOXB2P14652 356 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 PTNP21246 168 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 DTYMKP23919 212 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 PSMB10P40306 273 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 BUD31P41223 144 aaPredicted RBP8.28□□□□□ -1.08
PDGFC-201ENST00000274071 CX3CR1P49238 355 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 H3F3AP84243 136 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 CYCSP99999 105 aaKnown RBP8.28□□□□□ -1.08
PDGFC-201ENST00000274071 NOGQ13253 232 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 COA6Q5JTJ3 125 aaKnown RBP8.28□□□□□ -1.08
PDGFC-201ENST00000274071 RPL22L1Q6P5R6 122 aaKnown RBP8.28□□□□□ -1.08
PDGFC-201ENST00000274071 FAM151BQ6UXP7 276 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 MRPL41Q8IXM3 137 aaKnown RBP8.28□□□□□ -1.08
PDGFC-201ENST00000274071 CMTM1Q8IZ96 169 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 C1orf87Q8N0U7 546 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 TMEM229BQ8NBD8 167 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 AGBL5Q8NDL9 886 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 OR6K2Q8NGY2 324 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 OR51F2Q8NH61 342 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms