RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 HPNP05981 417 aa13.55□□□□□ -0.24
SF3B4-201ENST00000271628 ADRA2CP18825 462 aa13.55□□□□□ -0.24
SF3B4-201ENST00000271628 CDAP32320 146 aa13.55□□□□□ -0.24
SF3B4-201ENST00000271628 LUZP2Q86TE4 346 aa13.55□□□□□ -0.24
SF3B4-201ENST00000271628 SULF2Q8IWU5 870 aa13.55□□□□□ -0.24
SF3B4-201ENST00000271628 PRSS33Q8NF86 280 aa13.55□□□□□ -0.24
SF3B4-201ENST00000271628 OR56B4Q8NH76 319 aa13.55□□□□□ -0.24
SF3B4-201ENST00000271628 LGALS14Q8TCE9 139 aa13.55□□□□□ -0.24
SF3B4-201ENST00000271628 IRF2BPLQ9H1B7 796 aa13.55□□□□□ -0.24
SF3B4-201ENST00000271628 NELFAQ9H3P2 528 aa13.55□□□□□ -0.24
SF3B4-201ENST00000271628 MOB1AQ9H8S9 216 aa13.55□□□□□ -0.24
SF3B4-201ENST00000271628 EMC3Q9P0I2 261 aa13.55□□□□□ -0.24
SF3B4-201ENST00000271628 CLEC4AQ9UMR7 237 aa13.55□□□□□ -0.24
SF3B4-201ENST00000271628 PCDHGA9Q9Y5G4 932 aaKnown RBP13.55□□□□□ -0.24
SF3B4-201ENST00000271628 NCKAP5O14513 1909 aa13.55□□□□□ -0.24
SF3B4-201ENST00000271628 TRAV8-7A0A075B6U6 113 aa13.55□□□□□ -0.24
SF3B4-201ENST00000271628 A0A1B0GVI7 797 aa13.55□□□□□ -0.24
SF3B4-201ENST00000271628 TTLL8A6PVC2 850 aa13.55□□□□□ -0.24
SF3B4-201ENST00000271628 H2AFB2P0C5Z0 115 aa13.55□□□□□ -0.24
SF3B4-201ENST00000271628 HSD11B1P28845 292 aa13.55□□□□□ -0.24
SF3B4-201ENST00000271628 EIF1AXP47813 144 aaKnown RBP13.55□□□□□ -0.24
SF3B4-201ENST00000271628 SOX8P57073 446 aa13.55□□□□□ -0.24
SF3B4-201ENST00000271628 KLF9Q13886 244 aaPredicted RBP13.55□□□□□ -0.24
SF3B4-201ENST00000271628 GSG1Q2KHT4 349 aa13.55□□□□□ -0.24
SF3B4-201ENST00000271628 FGD2Q7Z6J4 655 aa13.55□□□□□ -0.24
SF3B4-201ENST00000271628 TMEM123Q8N131 208 aa13.55□□□□□ -0.24
SF3B4-201ENST00000271628 ZIC4Q8N9L1 334 aa13.55□□□□□ -0.24
SF3B4-201ENST00000271628 OR10D3Q8NH80 312 aa13.55□□□□□ -0.24
SF3B4-201ENST00000271628 ZNF431Q8TF32 576 aaPredicted RBP13.55□□□□□ -0.24
SF3B4-201ENST00000271628 PPP1R14AQ96A00 147 aa13.55□□□□□ -0.24
SF3B4-201ENST00000271628 GPR137Q96N19 417 aa13.55□□□□□ -0.24
SF3B4-201ENST00000271628 ZNF703Q9H7S9 590 aaPredicted RBP13.55□□□□□ -0.24
SF3B4-201ENST00000271628 FAM206AQ9NX38 181 aa13.55□□□□□ -0.24
SF3B4-201ENST00000271628 ZNF222Q9UK12 451 aa13.55□□□□□ -0.24
SF3B4-201ENST00000271628 RCE1Q9Y256 329 aa13.55□□□□□ -0.24
SF3B4-201ENST00000271628 KLF13Q9Y2Y9 288 aaPredicted RBP13.55□□□□□ -0.24
SF3B4-201ENST00000271628 ETV7Q9Y603 341 aa13.55□□□□□ -0.24
SF3B4-201ENST00000271628 A0A0B4J203 849 aa13.54□□□□□ -0.24
SF3B4-201ENST00000271628 KLRC4-KLRK1H3BQV0 150 aa13.54□□□□□ -0.24
SF3B4-201ENST00000271628 ECDO95905 644 aaPredicted RBP13.54□□□□□ -0.24
SF3B4-201ENST00000271628 CSRP1P21291 193 aaKnown RBP13.54□□□□□ -0.24
SF3B4-201ENST00000271628 CFPP27918 469 aa13.54□□□□□ -0.24
SF3B4-201ENST00000271628 IGF2-ASQ6U949 168 aa13.54□□□□□ -0.24
SF3B4-201ENST00000271628 CFAP77Q6ZQR2 320 aa13.54□□□□□ -0.24
SF3B4-201ENST00000271628 RAB40AQ8WXH6 277 aa13.54□□□□□ -0.24
SF3B4-201ENST00000271628 PLEKHA1Q9HB21 404 aa13.54□□□□□ -0.24
SF3B4-201ENST00000271628 ASH2LQ9UBL3 628 aa13.54□□□□□ -0.24
SF3B4-201ENST00000271628 FOXD3Q9UJU5 478 aaPredicted RBP13.54□□□□□ -0.24
SF3B4-201ENST00000271628 OR5H15A6NDH6 313 aa13.54□□□□□ -0.24
SF3B4-201ENST00000271628 DHHO43323 396 aa13.54□□□□□ -0.24
SF3B4-201ENST00000271628 CXCL13O43927 109 aa13.54□□□□□ -0.24
SF3B4-201ENST00000271628 SP1P08047 785 aa13.54□□□□□ -0.24
SF3B4-201ENST00000271628 LIPCP11150 499 aa13.54□□□□□ -0.24
SF3B4-201ENST00000271628 FSTP19883 344 aa13.54□□□□□ -0.24
SF3B4-201ENST00000271628 MSR1P21757 451 aa13.54□□□□□ -0.24
SF3B4-201ENST00000271628 NBL1P41271 181 aa13.54□□□□□ -0.24
SF3B4-201ENST00000271628 STARP49675 285 aa13.54□□□□□ -0.24
SF3B4-201ENST00000271628 ZNF84P51523 738 aa13.54□□□□□ -0.24
SF3B4-201ENST00000271628 TAF13Q15543 124 aa13.54□□□□□ -0.24
SF3B4-201ENST00000271628 ZBTB37Q5TC79 503 aa13.54□□□□□ -0.24
SF3B4-201ENST00000271628 SLC25A25Q6KCM7 469 aa13.54□□□□□ -0.24
SF3B4-201ENST00000271628 FOXL2NBQ6ZUU3 175 aa13.54□□□□□ -0.24
SF3B4-201ENST00000271628 FCRLAQ7L513 359 aa13.54□□□□□ -0.24
SF3B4-201ENST00000271628 OR10S1Q8NGN2 331 aa13.54□□□□□ -0.24
SF3B4-201ENST00000271628 SLC39A7Q92504 469 aa13.54□□□□□ -0.24
SF3B4-201ENST00000271628 S100A16Q96FQ6 103 aaKnown RBP13.54□□□□□ -0.24
SF3B4-201ENST00000271628 B3GNT2Q9NY97 397 aa13.54□□□□□ -0.24
SF3B4-201ENST00000271628 PLA2G3Q9NZ20 509 aa13.54□□□□□ -0.24
SF3B4-201ENST00000271628 STEAP1Q9UHE8 339 aa13.54□□□□□ -0.24
SF3B4-201ENST00000271628 MGAT4AQ9UM21 535 aa13.54□□□□□ -0.24
SF3B4-201ENST00000271628 FLVCR1Q9Y5Y0 555 aa13.54□□□□□ -0.24
SF3B4-201ENST00000271628 MEGF11A6BM72 1044 aa13.53□□□□□ -0.24
SF3B4-201ENST00000271628 NAP1L6A6NFF2 107 aa13.53□□□□□ -0.24
SF3B4-201ENST00000271628 ZNF716A6NP11 495 aa13.53□□□□□ -0.24
SF3B4-201ENST00000271628 H3BSH0 61 aa13.53□□□□□ -0.24
SF3B4-201ENST00000271628 SULT1B1O43704 296 aa13.53□□□□□ -0.24
SF3B4-201ENST00000271628 GDNFP39905 211 aa13.53□□□□□ -0.24
SF3B4-201ENST00000271628 SELENOPP49908 381 aa13.53□□□□□ -0.24
SF3B4-201ENST00000271628 AP3S2P59780 193 aa13.53□□□□□ -0.24
SF3B4-201ENST00000271628 RIPPLY1Q0D2K3 151 aa13.53□□□□□ -0.24
SF3B4-201ENST00000271628 TGIF1Q15583 401 aa13.53□□□□□ -0.24
SF3B4-201ENST00000271628 SGCAQ16586 387 aa13.53□□□□□ -0.24
SF3B4-201ENST00000271628 C20orf196Q8IYI0 205 aa13.53□□□□□ -0.24
SF3B4-201ENST00000271628 ELMOD2Q8IZ81 293 aa13.53□□□□□ -0.24
SF3B4-201ENST00000271628 CMTM4Q8IZR5 234 aa13.53□□□□□ -0.24
SF3B4-201ENST00000271628 GJC3Q8NFK1 279 aa13.53□□□□□ -0.24
SF3B4-201ENST00000271628 OR13C3Q8NGS6 347 aa13.53□□□□□ -0.24
SF3B4-201ENST00000271628 ANGPTL6Q8NI99 470 aa13.53□□□□□ -0.24
SF3B4-201ENST00000271628 TTTY12Q9BZ98 90 aa13.53□□□□□ -0.24
SF3B4-201ENST00000271628 ULBP2Q9BZM5 246 aa13.53□□□□□ -0.24
SF3B4-201ENST00000271628 ASCL3Q9NQ33 180 aa13.53□□□□□ -0.24
SF3B4-201ENST00000271628 OR5V1Q9UGF6 321 aa13.53□□□□□ -0.24
SF3B4-201ENST00000271628 SLC23A1Q9UHI7 598 aa13.53□□□□□ -0.24
SF3B4-201ENST00000271628 MEIKINA0A087WXM9 373 aa13.52□□□□□ -0.24
SF3B4-201ENST00000271628 LOC107986453A0A1B0GWG9 222 aa13.52□□□□□ -0.24
SF3B4-201ENST00000271628 GABARAPH6UMI1 98 aa13.52□□□□□ -0.24
SF3B4-201ENST00000271628 NOS1APO75052 506 aaPredicted RBP13.52□□□□□ -0.24
SF3B4-201ENST00000271628 SULT1A3P0DMM9 295 aa13.52□□□□□ -0.24
SF3B4-201ENST00000271628 SULT1A4P0DMN0 295 aa13.52□□□□□ -0.24
SF3B4-201ENST00000271628 CD46P15529 392 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms