RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 TM4SF19Q96DZ7 209 aa11.79□□□□□ -0.52
NUP54-201ENST00000264883 LMF1Q96S06 567 aa11.79□□□□□ -0.52
NUP54-201ENST00000264883 NMNAT3Q96T66 252 aa11.79□□□□□ -0.52
NUP54-201ENST00000264883 CLEC1BQ9P126 229 aa11.79□□□□□ -0.52
NUP54-201ENST00000264883 KCNK6Q9Y257 313 aa11.79□□□□□ -0.52
NUP54-201ENST00000264883 SLC17A4Q9Y2C5 497 aa11.79□□□□□ -0.52
NUP54-201ENST00000264883 RAB6AP20340 208 aa11.78□□□□□ -0.52
NUP54-201ENST00000264883 CFPP27918 469 aa11.78□□□□□ -0.52
NUP54-201ENST00000264883 NUTF2P61970 127 aaKnown RBP11.78□□□□□ -0.52
NUP54-201ENST00000264883 RAP1AP62834 184 aa11.78□□□□□ -0.52
NUP54-201ENST00000264883 EIF2B1Q14232 305 aaKnown RBP11.78□□□□□ -0.52
NUP54-201ENST00000264883 PDGFRLQ15198 375 aa11.78□□□□□ -0.52
NUP54-201ENST00000264883 TRMT12Q53H54 448 aaKnown RBP11.78□□□□□ -0.52
NUP54-201ENST00000264883 ALG10BQ5I7T1 473 aa11.78□□□□□ -0.52
NUP54-201ENST00000264883 FAHD2BQ6P2I3 314 aaPredicted RBP11.78□□□□□ -0.52
NUP54-201ENST00000264883 PRSS54Q6PEW0 395 aa11.78□□□□□ -0.52
NUP54-201ENST00000264883 ULK3Q6PHR2 472 aa11.78□□□□□ -0.52
NUP54-201ENST00000264883 VITQ6UXI7 678 aa11.78□□□□□ -0.52
NUP54-201ENST00000264883 LINC00114Q6XXX2 140 aa11.78□□□□□ -0.52
NUP54-201ENST00000264883 TAF8Q7Z7C8 310 aa11.78□□□□□ -0.52
NUP54-201ENST00000264883 ZNF584Q8IVC4 421 aa11.78□□□□□ -0.52
NUP54-201ENST00000264883 ZNF676Q8N7Q3 588 aa11.78□□□□□ -0.52
NUP54-201ENST00000264883 ADAD2Q8NCV1 583 aaKnown RBP11.78□□□□□ -0.52
NUP54-201ENST00000264883 FAHD2AQ96GK7 314 aa11.78□□□□□ -0.52
NUP54-201ENST00000264883 AQP10Q96PS8 301 aa11.78□□□□□ -0.52
NUP54-201ENST00000264883 NMNAT2Q9BZQ4 307 aa11.78□□□□□ -0.52
NUP54-201ENST00000264883 SLC5A7Q9GZV3 580 aa11.78□□□□□ -0.52
NUP54-201ENST00000264883 S1PR5Q9H228 398 aa11.78□□□□□ -0.52
NUP54-201ENST00000264883 RXFP3Q9NSD7 469 aa11.78□□□□□ -0.52
NUP54-201ENST00000264883 SLC2A8Q9NY64 477 aa11.78□□□□□ -0.52
NUP54-201ENST00000264883 OR5AC2Q9NZP5 309 aa11.78□□□□□ -0.52
NUP54-201ENST00000264883 ZNF107Q9UII5 783 aaPredicted RBP11.78□□□□□ -0.52
NUP54-201ENST00000264883 KLK13Q9UKR3 277 aa11.78□□□□□ -0.52
NUP54-201ENST00000264883 ZNF726A6NNF4 738 aa11.78□□□□□ -0.52
NUP54-201ENST00000264883 HSPB2A8KAH6 182 aa11.78□□□□□ -0.52
NUP54-201ENST00000264883 FAM171A2A8MVW0 826 aa11.78□□□□□ -0.52
NUP54-201ENST00000264883 UMAD1C9J7I0 102 aa11.78□□□□□ -0.52
NUP54-201ENST00000264883 DNAJB6O75190 326 aa11.78□□□□□ -0.52
NUP54-201ENST00000264883 GLCEO94923 617 aa11.78□□□□□ -0.52
NUP54-201ENST00000264883 C5AR1P21730 350 aa11.78□□□□□ -0.52
NUP54-201ENST00000264883 EBPQ15125 230 aaKnown RBP11.78□□□□□ -0.52
NUP54-201ENST00000264883 TOMM20Q15388 145 aa11.78□□□□□ -0.52
NUP54-201ENST00000264883 HSPB2Q16082 182 aa11.78□□□□□ -0.52
NUP54-201ENST00000264883 ODF4Q2M2E3 257 aa11.78□□□□□ -0.52
NUP54-201ENST00000264883 RNASE10Q5GAN6 216 aaKnown RBP11.78□□□□□ -0.52
NUP54-201ENST00000264883 TTLL10Q6ZVT0 673 aa11.78□□□□□ -0.52
NUP54-201ENST00000264883 GKN2Q86XP6 184 aa11.78□□□□□ -0.52
NUP54-201ENST00000264883 ZNF595Q8IYB9 648 aa11.78□□□□□ -0.52
NUP54-201ENST00000264883 OR51A4Q8NGJ6 313 aa11.78□□□□□ -0.52
NUP54-201ENST00000264883 ROBO4Q8WZ75 1007 aa11.78□□□□□ -0.52
NUP54-201ENST00000264883 HOXB13Q92826 284 aaPredicted RBP11.78□□□□□ -0.52
NUP54-201ENST00000264883 MRGPRFQ96AM1 343 aa11.78□□□□□ -0.52
NUP54-201ENST00000264883 ADAD1Q96M93 576 aaKnown RBP11.78□□□□□ -0.52
NUP54-201ENST00000264883 CCNL2Q96S94 520 aaPredicted RBP11.78□□□□□ -0.52
NUP54-201ENST00000264883 COMMD4Q9H0A8 199 aa11.78□□□□□ -0.52
NUP54-201ENST00000264883 SMOC1Q9H4F8 434 aa11.78□□□□□ -0.52
NUP54-201ENST00000264883 ZNF576Q9H609 170 aa11.78□□□□□ -0.52
NUP54-201ENST00000264883 ZMAT3Q9HA38 289 aaKnown RBP11.78□□□□□ -0.52
NUP54-201ENST00000264883 FLRT3Q9NZU0 649 aa11.78□□□□□ -0.52
NUP54-201ENST00000264883 MRM2Q9UI43 246 aaKnown RBP11.78□□□□□ -0.52
NUP54-201ENST00000264883 STARD10Q9Y365 291 aa11.78□□□□□ -0.52
NUP54-201ENST00000264883 OR1A2Q9Y585 309 aa11.78□□□□□ -0.52
NUP54-201ENST00000264883 FLVCR1Q9Y5Y0 555 aa11.78□□□□□ -0.52
NUP54-201ENST00000264883 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.77□□□□□ -0.52
NUP54-201ENST00000264883 SLC17A2O00624 439 aa11.77□□□□□ -0.52
NUP54-201ENST00000264883 EFSO43281 561 aa11.77□□□□□ -0.52
NUP54-201ENST00000264883 NKX2-2O95096 273 aa11.77□□□□□ -0.52
NUP54-201ENST00000264883 TSPAN15O95858 294 aa11.77□□□□□ -0.52
NUP54-201ENST00000264883 HKR1P10072 659 aa11.77□□□□□ -0.52
NUP54-201ENST00000264883 ARRB1P49407 418 aaPredicted RBP11.77□□□□□ -0.52
NUP54-201ENST00000264883 ZNF84P51523 738 aa11.77□□□□□ -0.52
NUP54-201ENST00000264883 HSD11B2P80365 405 aa11.77□□□□□ -0.52
NUP54-201ENST00000264883 OR8G1Q15617 311 aa11.77□□□□□ -0.52
NUP54-201ENST00000264883 NPEPL1Q8NDH3 523 aa11.77□□□□□ -0.52
NUP54-201ENST00000264883 ZPLD1Q8TCW7 415 aa11.77□□□□□ -0.52
NUP54-201ENST00000264883 CD300LFQ8TDQ1 290 aa11.77□□□□□ -0.52
NUP54-201ENST00000264883 GPR148Q8TDV2 347 aa11.77□□□□□ -0.52
NUP54-201ENST00000264883 LCN9Q8WX39 176 aa11.77□□□□□ -0.52
NUP54-201ENST00000264883 YPEL4Q96NS1 127 aa11.77□□□□□ -0.52
NUP54-201ENST00000264883 NKX3-1Q99801 234 aaPredicted RBP11.77□□□□□ -0.52
NUP54-201ENST00000264883 ULBP3Q9BZM4 244 aa11.77□□□□□ -0.52
NUP54-201ENST00000264883 MBNL1Q9NR56 388 aaKnown RBP11.77□□□□□ -0.52
NUP54-201ENST00000264883 UBQLN4Q9NRR5 601 aa11.77□□□□□ -0.52
NUP54-201ENST00000264883 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.77□□□□□ -0.52
NUP54-201ENST00000264883 XIRP2A4UGR9 3374 aa11.77□□□□□ -0.53
NUP54-201ENST00000264883 STK17BO94768 372 aa11.77□□□□□ -0.53
NUP54-201ENST00000264883 LYL1P12980 280 aa11.77□□□□□ -0.53
NUP54-201ENST00000264883 RPL4P36578 427 aaKnown RBP11.77□□□□□ -0.53
NUP54-201ENST00000264883 LSSP48449 732 aa11.77□□□□□ -0.53
NUP54-201ENST00000264883 PRPS1P60891 318 aa11.77□□□□□ -0.53
NUP54-201ENST00000264883 RPS23P62266 143 aaKnown RBP11.77□□□□□ -0.53
NUP54-201ENST00000264883 RUNX2Q13950 521 aa11.77□□□□□ -0.53
NUP54-201ENST00000264883 GUK1Q16774 197 aa11.77□□□□□ -0.53
NUP54-201ENST00000264883 PDZD11Q5EBL8 140 aa11.77□□□□□ -0.53
NUP54-201ENST00000264883 AGBL4Q5VU57 503 aa11.77□□□□□ -0.53
NUP54-201ENST00000264883 SPNS3Q6ZMD2 512 aa11.77□□□□□ -0.53
NUP54-201ENST00000264883 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.77□□□□□ -0.53
NUP54-201ENST00000264883 ZNF610Q8N9Z0 462 aa11.77□□□□□ -0.53
NUP54-201ENST00000264883 ZNF511Q8NB15 262 aa11.77□□□□□ -0.53
NUP54-201ENST00000264883 AVL9Q8NBF6 648 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms