RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 A0A0G2JK05 382 aa20.02■□□□□ 0.8
SMARCB1-201ENST00000263121 LOC107986453A0A1B0GWG9 222 aa20.02■□□□□ 0.8
SMARCB1-201ENST00000263121 TMEM8BA6NDV4 472 aa20.02■□□□□ 0.8
SMARCB1-201ENST00000263121 ACSM4P0C7M7 580 aa20.02■□□□□ 0.8
SMARCB1-201ENST00000263121 SRMP19623 302 aa20.02■□□□□ 0.8
SMARCB1-201ENST00000263121 GALK2Q01415 458 aa20.02■□□□□ 0.8
SMARCB1-201ENST00000263121 KRTAP27-1Q3LI81 207 aa20.02■□□□□ 0.8
SMARCB1-201ENST00000263121 OR1F12Q8NHA8 337 aa20.02■□□□□ 0.8
SMARCB1-201ENST00000263121 TSEN15Q8WW01 171 aaKnown RBP20.02■□□□□ 0.8
SMARCB1-201ENST00000263121 TMEM106AQ96A25 262 aa20.02■□□□□ 0.8
SMARCB1-201ENST00000263121 SMURF1Q9HCE7 757 aa20.02■□□□□ 0.8
SMARCB1-201ENST00000263121 HHLA2Q9UM44 414 aa20.02■□□□□ 0.8
SMARCB1-201ENST00000263121 A0A096LPE4 126 aa20.01■□□□□ 0.79
SMARCB1-201ENST00000263121 A0A1W2PPZ6 126 aa20.01■□□□□ 0.79
SMARCB1-201ENST00000263121 H3BSH0 61 aa20.01■□□□□ 0.79
SMARCB1-201ENST00000263121 CNOT4O95628 575 aaKnown RBP20.01■□□□□ 0.79
SMARCB1-201ENST00000263121 FOXF2Q12947 444 aa20.01■□□□□ 0.79
SMARCB1-201ENST00000263121 SLC36A2Q495M3 483 aa20.01■□□□□ 0.79
SMARCB1-201ENST00000263121 CNEP1R1Q8N9A8 125 aa20.01■□□□□ 0.79
SMARCB1-201ENST00000263121 OR8B12Q8NGG6 310 aa20.01■□□□□ 0.79
SMARCB1-201ENST00000263121 OR1K1Q8NGR3 316 aa20.01■□□□□ 0.79
SMARCB1-201ENST00000263121 AKR7LQ8NHP1 331 aa20.01■□□□□ 0.79
SMARCB1-201ENST00000263121 ASB5Q8WWX0 329 aa20.01■□□□□ 0.79
SMARCB1-201ENST00000263121 SPTSSAQ969W0 71 aa20.01■□□□□ 0.79
SMARCB1-201ENST00000263121 SLC24A3Q9HC58 644 aa20.01■□□□□ 0.79
SMARCB1-201ENST00000263121 AKIP1Q9NQ31 210 aa20.01■□□□□ 0.79
SMARCB1-201ENST00000263121 SLC17A5Q9NRA2 495 aa20.01■□□□□ 0.79
SMARCB1-201ENST00000263121 CRNNQ9UBG3 495 aaPredicted RBP20.01■□□□□ 0.79
SMARCB1-201ENST00000263121 GTF3C1Q12789 2109 aa20.01■□□□□ 0.79
SMARCB1-201ENST00000263121 F5H5K5 113 aa20■□□□□ 0.79
SMARCB1-201ENST00000263121 P2RY10O00398 339 aa20■□□□□ 0.79
SMARCB1-201ENST00000263121 TOXO94900 526 aa20■□□□□ 0.79
SMARCB1-201ENST00000263121 APOC1P02654 83 aa20■□□□□ 0.79
SMARCB1-201ENST00000263121 HOXD4P09016 255 aaPredicted RBP20■□□□□ 0.79
SMARCB1-201ENST00000263121 SLC2A1P11166 492 aa20■□□□□ 0.79
SMARCB1-201ENST00000263121 ABOP16442 354 aa20■□□□□ 0.79
SMARCB1-201ENST00000263121 RAB3BP20337 219 aa20■□□□□ 0.79
SMARCB1-201ENST00000263121 ANOS1P23352 680 aa20■□□□□ 0.79
SMARCB1-201ENST00000263121 OR10A3P58181 314 aa20■□□□□ 0.79
SMARCB1-201ENST00000263121 PRR30Q53SZ7 412 aaPredicted RBP20■□□□□ 0.79
SMARCB1-201ENST00000263121 CEP78Q5JTW2 689 aa20■□□□□ 0.79
SMARCB1-201ENST00000263121 ANKRD16Q6P6B7 361 aa20■□□□□ 0.79
SMARCB1-201ENST00000263121 VWA1Q6PCB0 445 aa20■□□□□ 0.79
SMARCB1-201ENST00000263121 SLC7A6Q92536 515 aa20■□□□□ 0.79
SMARCB1-201ENST00000263121 AP3S1Q92572 193 aa20■□□□□ 0.79
SMARCB1-201ENST00000263121 ZNF319Q9P2F9 582 aa20■□□□□ 0.79
SMARCB1-201ENST00000263121 DHDHQ9UQ10 334 aa20■□□□□ 0.79
SMARCB1-201ENST00000263121 PEX16Q9Y5Y5 336 aa20■□□□□ 0.79
SMARCB1-201ENST00000263121 M0R135 149 aa20■□□□□ 0.79
SMARCB1-201ENST00000263121 TNFSF13O75888 250 aa20■□□□□ 0.79
SMARCB1-201ENST00000263121 CRHP06850 196 aa20■□□□□ 0.79
SMARCB1-201ENST00000263121 DBHP09172 617 aa20■□□□□ 0.79
SMARCB1-201ENST00000263121 CFL1P23528 166 aaKnown RBP20■□□□□ 0.79
SMARCB1-201ENST00000263121 BCL2L2Q92843 193 aaPredicted RBP20■□□□□ 0.79
SMARCB1-201ENST00000263121 ZNF799Q96GE5 643 aa20■□□□□ 0.79
SMARCB1-201ENST00000263121 A0A1B0GTI1 187 aa19.99■□□□□ 0.79
SMARCB1-201ENST00000263121 CTDSP2O14595 271 aa19.99■□□□□ 0.79
SMARCB1-201ENST00000263121 PABPC1L2AQ5JQF8 200 aa19.99■□□□□ 0.79
SMARCB1-201ENST00000263121 Q6ZT83 130 aa19.99■□□□□ 0.79
SMARCB1-201ENST00000263121 FAM57BQ71RH2 274 aa19.99■□□□□ 0.79
SMARCB1-201ENST00000263121 NAA40Q86UY6 237 aa19.99■□□□□ 0.79
SMARCB1-201ENST00000263121 CROCCP3Q8IVE0 287 aa19.99■□□□□ 0.79
SMARCB1-201ENST00000263121 KDF1Q8NAX2 398 aaPredicted RBP19.99■□□□□ 0.79
SMARCB1-201ENST00000263121 SLC25A18Q9H1K4 315 aa19.99■□□□□ 0.79
SMARCB1-201ENST00000263121 ZCCHC4Q9H5U6 513 aa19.99■□□□□ 0.79
SMARCB1-201ENST00000263121 PLSCR4Q9NRQ2 329 aa19.99■□□□□ 0.79
SMARCB1-201ENST00000263121 ASF1BQ9NVP2 202 aa19.99■□□□□ 0.79
SMARCB1-201ENST00000263121 ATPIF1Q9UII2 106 aa19.99■□□□□ 0.79
SMARCB1-201ENST00000263121 ZNF503-AS2A6NEH8 195 aa19.98■□□□□ 0.79
SMARCB1-201ENST00000263121 ANXA2P07355 339 aaKnown RBP19.98■□□□□ 0.79
SMARCB1-201ENST00000263121 BMP4P12644 408 aa19.98■□□□□ 0.79
SMARCB1-201ENST00000263121 TIMP3P35625 211 aa19.98■□□□□ 0.79
SMARCB1-201ENST00000263121 HTR5AP47898 357 aa19.98■□□□□ 0.79
SMARCB1-201ENST00000263121 PER3P56645 1201 aa19.98■□□□□ 0.79
SMARCB1-201ENST00000263121 EIF2S3LQ2VIR3 472 aaKnown RBP19.98■□□□□ 0.79
SMARCB1-201ENST00000263121 SFXN4Q6P4A7 337 aa19.98■□□□□ 0.79
SMARCB1-201ENST00000263121 BTLAQ7Z6A9 289 aa19.98■□□□□ 0.79
SMARCB1-201ENST00000263121 MFSD4AQ8N468 514 aa19.98■□□□□ 0.79
SMARCB1-201ENST00000263121 RPRMLQ8N4K4 120 aa19.98■□□□□ 0.79
SMARCB1-201ENST00000263121 S100ZQ8WXG8 99 aa19.98■□□□□ 0.79
SMARCB1-201ENST00000263121 PRRC2CQ9Y520 2896 aaKnown RBP19.98■□□□□ 0.79
SMARCB1-201ENST00000263121 TRAV8-7A0A075B6U6 113 aa19.97■□□□□ 0.79
SMARCB1-201ENST00000263121 CGAP01215 116 aa19.97■□□□□ 0.79
SMARCB1-201ENST00000263121 IGLV3-1P01715 115 aa19.97■□□□□ 0.79
SMARCB1-201ENST00000263121 HLA-HP01893 362 aa19.97■□□□□ 0.79
SMARCB1-201ENST00000263121 CCL1P22362 96 aa19.97■□□□□ 0.79
SMARCB1-201ENST00000263121 IGHV1-2P23083 117 aa19.97■□□□□ 0.79
SMARCB1-201ENST00000263121 S100A5P33763 92 aa19.97■□□□□ 0.79
SMARCB1-201ENST00000263121 SFRP5Q5T4F7 317 aa19.97■□□□□ 0.79
SMARCB1-201ENST00000263121 ASPHD2Q6ICH7 369 aa19.97■□□□□ 0.79
SMARCB1-201ENST00000263121 DRAM2Q6UX65 266 aa19.97■□□□□ 0.79
SMARCB1-201ENST00000263121 STAC2Q6ZMT1 411 aa19.97■□□□□ 0.79
SMARCB1-201ENST00000263121 DPPA2Q7Z7J5 298 aa19.97■□□□□ 0.79
SMARCB1-201ENST00000263121 LRRTM1Q86UE6 522 aa19.97■□□□□ 0.79
SMARCB1-201ENST00000263121 OR13C3Q8NGS6 347 aa19.97■□□□□ 0.79
SMARCB1-201ENST00000263121 OR51E1Q8TCB6 317 aa19.97■□□□□ 0.79
SMARCB1-201ENST00000263121 STARD4Q96DR4 205 aa19.97■□□□□ 0.79
SMARCB1-201ENST00000263121 ZFP3Q96NJ6 502 aa19.97■□□□□ 0.79
SMARCB1-201ENST00000263121 GFI1Q99684 422 aa19.97■□□□□ 0.79
SMARCB1-201ENST00000263121 SLITRK2Q9H156 845 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms