RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 B3GLCTQ6Y288 498 aa10.04□□□□□ -0.8
PFDN1-201ENST00000261813 SLC16A14Q7RTX9 510 aa10.04□□□□□ -0.8
PFDN1-201ENST00000261813 CDC20BQ86Y33 519 aa10.04□□□□□ -0.8
PFDN1-201ENST00000261813 LRRC18Q8N456 261 aa10.04□□□□□ -0.8
PFDN1-201ENST00000261813 FAM169BQ8N8A8 192 aa10.04□□□□□ -0.8
PFDN1-201ENST00000261813 OR6N2Q8NGY6 317 aa10.04□□□□□ -0.8
PFDN1-201ENST00000261813 ZNRF4Q8WWF5 429 aa10.04□□□□□ -0.8
PFDN1-201ENST00000261813 C11orf40Q8WZ69 217 aa10.04□□□□□ -0.8
PFDN1-201ENST00000261813 RHNO1Q9BSD3 238 aa10.04□□□□□ -0.8
PFDN1-201ENST00000261813 ALG8Q9BVK2 526 aa10.04□□□□□ -0.8
PFDN1-201ENST00000261813 ESRP2Q9H6T0 727 aaKnown RBP10.04□□□□□ -0.8
PFDN1-201ENST00000261813 POLR1DQ9Y2S0 133 aa10.04□□□□□ -0.8
PFDN1-201ENST00000261813 PRR14LQ5THK1 2151 aa10.03□□□□□ -0.8
PFDN1-201ENST00000261813 A0A1W2PQL4 384 aaPredicted RBP10.03□□□□□ -0.8
PFDN1-201ENST00000261813 TVP23AA6NH52 213 aa10.03□□□□□ -0.8
PFDN1-201ENST00000261813 SELENOFO60613 162 aa10.03□□□□□ -0.8
PFDN1-201ENST00000261813 ZNF254O75437 659 aa10.03□□□□□ -0.8
PFDN1-201ENST00000261813 UBL3O95164 117 aa10.03□□□□□ -0.8
PFDN1-201ENST00000261813 TFP02787 698 aa10.03□□□□□ -0.8
PFDN1-201ENST00000261813 TFAP2AP05549 437 aa10.03□□□□□ -0.8
PFDN1-201ENST00000261813 KRT8P05787 483 aa10.03□□□□□ -0.8
PFDN1-201ENST00000261813 MMP7P09237 267 aaPredicted RBP10.03□□□□□ -0.8
PFDN1-201ENST00000261813 SPARCP09486 303 aa10.03□□□□□ -0.8
PFDN1-201ENST00000261813 CECR9P0C854 216 aa10.03□□□□□ -0.8
PFDN1-201ENST00000261813 LIMS3P0CW19 117 aa10.03□□□□□ -0.8
PFDN1-201ENST00000261813 LIMS4P0CW20 117 aa10.03□□□□□ -0.8
PFDN1-201ENST00000261813 ALOX5APP20292 161 aa10.03□□□□□ -0.8
PFDN1-201ENST00000261813 PCMT1P22061 227 aa10.03□□□□□ -0.8
PFDN1-201ENST00000261813 PAX7P23759 505 aa10.03□□□□□ -0.8
PFDN1-201ENST00000261813 ALDH3B2P48448 385 aa10.03□□□□□ -0.8
PFDN1-201ENST00000261813 ETV1P50549 477 aa10.03□□□□□ -0.8
PFDN1-201ENST00000261813 IDH3GP51553 393 aaPredicted RBP10.03□□□□□ -0.8
PFDN1-201ENST00000261813 TAS2R43P59537 309 aa10.03□□□□□ -0.8
PFDN1-201ENST00000261813 RAB1AP62820 205 aa10.03□□□□□ -0.8
PFDN1-201ENST00000261813 BDH1Q02338 343 aa10.03□□□□□ -0.8
PFDN1-201ENST00000261813 ACSM1Q08AH1 577 aa10.03□□□□□ -0.8
PFDN1-201ENST00000261813 MED22Q15528 200 aa10.03□□□□□ -0.8
PFDN1-201ENST00000261813 NEDD8Q15843 81 aa10.03□□□□□ -0.8
PFDN1-201ENST00000261813 SYT6Q5T7P8 510 aaPredicted RBP10.03□□□□□ -0.8
PFDN1-201ENST00000261813 ZNF544Q6NX49 715 aa10.03□□□□□ -0.8
PFDN1-201ENST00000261813 TMEM108Q6UXF1 575 aa10.03□□□□□ -0.8
PFDN1-201ENST00000261813 ZNF704Q6ZNC4 412 aaPredicted RBP10.03□□□□□ -0.8
PFDN1-201ENST00000261813 DPY19L4Q7Z388 723 aa10.03□□□□□ -0.8
PFDN1-201ENST00000261813 FAM220AQ7Z4H9 259 aa10.03□□□□□ -0.8
PFDN1-201ENST00000261813 GPR141Q7Z602 305 aa10.03□□□□□ -0.8
PFDN1-201ENST00000261813 LHFPL3Q86UP9 236 aa10.03□□□□□ -0.8
PFDN1-201ENST00000261813 GJC3Q8NFK1 279 aa10.03□□□□□ -0.8
PFDN1-201ENST00000261813 THEM6Q8WUY1 208 aa10.03□□□□□ -0.8
PFDN1-201ENST00000261813 SGCDQ92629 289 aa10.03□□□□□ -0.8
PFDN1-201ENST00000261813 FBXO17Q96EF6 278 aa10.03□□□□□ -0.8
PFDN1-201ENST00000261813 LURAP1Q96LR2 239 aa10.03□□□□□ -0.8
PFDN1-201ENST00000261813 COG8Q96MW5 612 aa10.03□□□□□ -0.8
PFDN1-201ENST00000261813 ZNF416Q9BWM5 594 aa10.03□□□□□ -0.8
PFDN1-201ENST00000261813 MROQ9BYG7 248 aa10.03□□□□□ -0.8
PFDN1-201ENST00000261813 C1orf198Q9H425 327 aa10.03□□□□□ -0.8
PFDN1-201ENST00000261813 EMC7Q9NPA0 242 aa10.03□□□□□ -0.8
PFDN1-201ENST00000261813 MRPL22Q9NWU5 206 aaKnown RBP10.03□□□□□ -0.8
PFDN1-201ENST00000261813 CYB5R1Q9UHQ9 305 aa10.03□□□□□ -0.8
PFDN1-201ENST00000261813 RNF115Q9Y4L5 304 aa10.03□□□□□ -0.8
PFDN1-201ENST00000261813 SMIM31A0A1B0GVY4 71 aa10.02□□□□□ -0.8
PFDN1-201ENST00000261813 SHISA9B4DS77 424 aa10.02□□□□□ -0.8
PFDN1-201ENST00000261813 ABCD4O14678 606 aa10.02□□□□□ -0.8
PFDN1-201ENST00000261813 APOL3O95236 402 aa10.02□□□□□ -0.8
PFDN1-201ENST00000261813 CD3EP07766 207 aa10.02□□□□□ -0.8
PFDN1-201ENST00000261813 CST2P09228 141 aa10.02□□□□□ -0.8
PFDN1-201ENST00000261813 ZNF14P17017 642 aaPredicted RBP10.02□□□□□ -0.8
PFDN1-201ENST00000261813 ZNF32P17041 273 aa10.02□□□□□ -0.8
PFDN1-201ENST00000261813 PTAFRP25105 342 aa10.02□□□□□ -0.8
PFDN1-201ENST00000261813 ARR3P36575 388 aa10.02□□□□□ -0.8
PFDN1-201ENST00000261813 GBX2P52951 348 aaPredicted RBP10.02□□□□□ -0.8
PFDN1-201ENST00000261813 ROM1Q03395 351 aa10.02□□□□□ -0.8
PFDN1-201ENST00000261813 MLLT11Q13015 90 aaPredicted RBP10.02□□□□□ -0.8
PFDN1-201ENST00000261813 AQP6Q13520 282 aa10.02□□□□□ -0.8
PFDN1-201ENST00000261813 GPR50Q13585 617 aa10.02□□□□□ -0.8
PFDN1-201ENST00000261813 MEP1BQ16820 701 aa10.02□□□□□ -0.8
PFDN1-201ENST00000261813 TIGD6Q17RP2 521 aa10.02□□□□□ -0.8
PFDN1-201ENST00000261813 C3orf36Q3SXR2 165 aa10.02□□□□□ -0.8
PFDN1-201ENST00000261813 SLC36A2Q495M3 483 aa10.02□□□□□ -0.8
PFDN1-201ENST00000261813 CDONQ4KMG0 1287 aa10.02□□□□□ -0.8
PFDN1-201ENST00000261813 XAF1Q6GPH4 301 aa10.02□□□□□ -0.8
PFDN1-201ENST00000261813 ADAM5Q6NVV9 412 aa10.02□□□□□ -0.8
PFDN1-201ENST00000261813 ZNF322Q6U7Q0 402 aaPredicted RBP10.02□□□□□ -0.8
PFDN1-201ENST00000261813 ZNF584Q8IVC4 421 aa10.02□□□□□ -0.8
PFDN1-201ENST00000261813 KBTBD8Q8NFY9 601 aa10.02□□□□□ -0.8
PFDN1-201ENST00000261813 LILRB1Q8NHL6 650 aaPredicted RBP10.02□□□□□ -0.8
PFDN1-201ENST00000261813 NEUROG1Q92886 237 aa10.02□□□□□ -0.8
PFDN1-201ENST00000261813 MUL1Q969V5 352 aa10.02□□□□□ -0.8
PFDN1-201ENST00000261813 MGLLQ99685 303 aa10.02□□□□□ -0.8
PFDN1-201ENST00000261813 NIPAL2Q9H841 368 aa10.02□□□□□ -0.8
PFDN1-201ENST00000261813 PLEKHF2Q9H8W4 249 aa10.02□□□□□ -0.8
PFDN1-201ENST00000261813 MOV10Q9HCE1 1003 aaKnown RBP10.02□□□□□ -0.8
PFDN1-201ENST00000261813 TRIM36Q9NQ86 728 aa10.02□□□□□ -0.8
PFDN1-201ENST00000261813 BABAM2Q9NXR7 383 aa10.02□□□□□ -0.8
PFDN1-201ENST00000261813 ITGB1BP2Q9UKP3 347 aa10.02□□□□□ -0.8
PFDN1-201ENST00000261813 METTL15A6NJ78 407 aa10.01□□□□□ -0.81
PFDN1-201ENST00000261813 PTHP01270 115 aa10.01□□□□□ -0.81
PFDN1-201ENST00000261813 APOC1P02654 83 aa10.01□□□□□ -0.81
PFDN1-201ENST00000261813 PSMB9P28065 219 aa10.01□□□□□ -0.81
PFDN1-201ENST00000261813 CALCRP30988 508 aa10.01□□□□□ -0.81
PFDN1-201ENST00000261813 DCTDP32321 178 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms