RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 PSMB6P28072 239 aa9.11□□□□□ -0.95
PALB2-201ENST00000261584 ADH6P28332 368 aa9.11□□□□□ -0.95
PALB2-201ENST00000261584 GPR85P60893 370 aa9.11□□□□□ -0.95
PALB2-201ENST00000261584 C11orf87Q6NUJ2 197 aa9.11□□□□□ -0.95
PALB2-201ENST00000261584 Q6ZRG5 221 aa9.11□□□□□ -0.95
PALB2-201ENST00000261584 FAM122BQ7Z309 247 aa9.11□□□□□ -0.95
PALB2-201ENST00000261584 LRP11Q86VZ4 500 aa9.11□□□□□ -0.95
PALB2-201ENST00000261584 OR52H1Q8NGJ2 320 aa9.11□□□□□ -0.95
PALB2-201ENST00000261584 OR51F2Q8NH61 342 aa9.11□□□□□ -0.95
PALB2-201ENST00000261584 UBALD1Q8TB05 177 aa9.11□□□□□ -0.95
PALB2-201ENST00000261584 TSPAN32Q96QS1 320 aa9.11□□□□□ -0.95
PALB2-201ENST00000261584 MAGT1Q9H0U3 335 aa9.11□□□□□ -0.95
PALB2-201ENST00000261584 PIPOXQ9P0Z9 390 aa9.11□□□□□ -0.95
PALB2-201ENST00000261584 HIF3AQ9Y2N7 669 aa9.11□□□□□ -0.95
PALB2-201ENST00000261584 MRPS28Q9Y2Q9 187 aaKnown RBP9.11□□□□□ -0.95
PALB2-201ENST00000261584 IGHV3-15A0A0B4J1V0 119 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 K7EPK0 472 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 B3GALNT1O75752 331 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 TRAPPC6AO75865 159 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 C1QL1O75973 258 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 DBHP09172 617 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 NPBWR1P48145 328 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 RAB38P57729 211 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 EIF5AL1Q6IS14 154 aaKnown RBP9.1□□□□□ -0.95
PALB2-201ENST00000261584 ACOT7LQ6ZUV0 252 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 Q7L0L9 218 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 FAM71E2Q8N5Q1 922 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 FAM24BQ8N5W8 94 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 BMPERQ8N8U9 685 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 OR5L1Q8NGL2 311 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 TCEAL3Q969E4 200 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 NICN1Q9BSH3 213 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 TMEM59Q9BXS4 323 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 TEX101Q9BY14 249 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 HDAC8Q9BY41 377 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 PBX4Q9BYU1 374 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 FOXQ1Q9C009 403 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 ZNF442Q9H7R0 627 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 KCNJ16Q9NPI9 418 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 GLS2Q9UI32 602 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 MEMO1Q9Y316 297 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 LRP12Q9Y561 859 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 DOCK8Q8NF50 2099 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 SPTAN1Q13813 2472 aaKnown RBP9.1□□□□□ -0.95
PALB2-201ENST00000261584 A0A087WUJ7 227 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 CRYBA1P05813 215 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 HNRNPA1P09651 372 aaKnown RBP eCLIP9.1□□□□□ -0.95
PALB2-201ENST00000261584 VAMP2P63027 116 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 SERTAD2Q14140 314 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 RGS7BPQ6MZT1 257 aaPredicted RBP9.1□□□□□ -0.95
PALB2-201ENST00000261584 ADGRE4PQ86SQ3 457 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 BAP18Q8IXM2 172 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 OR1S1Q8NH92 325 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 SECTM1Q8WVN6 248 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 PNPLA2Q96AD5 504 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 MRPS18AQ9NVS2 196 aaKnown RBP9.1□□□□□ -0.95
PALB2-201ENST00000261584 H3BP45 60 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 ABCD4O14678 606 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 WNT11O96014 354 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 FAM157BP0CG42 384 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 ZNF44P15621 663 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 IL11P20809 199 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 TSFMP43897 325 aaKnown RBP9.1□□□□□ -0.95
PALB2-201ENST00000261584 MLF1P58340 268 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 SLC17A1Q14916 467 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 ZNF74Q16587 644 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 HAGHQ16775 308 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 MESTQ5EB52 335 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 OGFOD3Q6PK18 319 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 C19orf47Q8N9M1 422 aaKnown RBP9.1□□□□□ -0.95
PALB2-201ENST00000261584 OR2I1PQ8NGU4 316 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 RNF141Q8WVD5 230 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 MRPS24Q96EL2 167 aaKnown RBP9.1□□□□□ -0.95
PALB2-201ENST00000261584 COX14Q96I36 57 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 TLNRD1Q9H1K6 362 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 POLMQ9NP87 494 aaPredicted RBP9.1□□□□□ -0.95
PALB2-201ENST00000261584 IL23AQ9NPF7 189 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 CHRNA9Q9UGM1 479 aa9.1□□□□□ -0.95
PALB2-201ENST00000261584 PHF3Q92576 2039 aaKnown RBP9.09□□□□□ -0.95
PALB2-201ENST00000261584 A0A0U1RQK1 487 aa9.09□□□□□ -0.95
PALB2-201ENST00000261584 RFPL4AA6NLU0 287 aa9.09□□□□□ -0.95
PALB2-201ENST00000261584 RFPL4AL1F8VTS6 287 aa9.09□□□□□ -0.95
PALB2-201ENST00000261584 STMND1H3BQB6 276 aa9.09□□□□□ -0.95
PALB2-201ENST00000261584 FCGR2AP12318 317 aa9.09□□□□□ -0.95
PALB2-201ENST00000261584 CTRB1P17538 263 aa9.09□□□□□ -0.95
PALB2-201ENST00000261584 COL9A1P20849 921 aa9.09□□□□□ -0.95
PALB2-201ENST00000261584 CASRP41180 1078 aa9.09□□□□□ -0.95
PALB2-201ENST00000261584 SRSF3P84103 164 aaKnown RBP9.09□□□□□ -0.95
PALB2-201ENST00000261584 RIN1Q13671 783 aa9.09□□□□□ -0.95
PALB2-201ENST00000261584 NHLRC3Q5JS37 347 aa9.09□□□□□ -0.95
PALB2-201ENST00000261584 SLC25A30Q5SVS4 291 aa9.09□□□□□ -0.95
PALB2-201ENST00000261584 RPL7L1Q6DKI1 246 aaKnown RBP9.09□□□□□ -0.95
PALB2-201ENST00000261584 CTRB2Q6GPI1 263 aa9.09□□□□□ -0.95
PALB2-201ENST00000261584 DNM1P34Q6PK57 102 aa9.09□□□□□ -0.95
PALB2-201ENST00000261584 RTN4RL2Q86UN3 420 aa9.09□□□□□ -0.95
PALB2-201ENST00000261584 FNDC9Q8TBE3 224 aa9.09□□□□□ -0.95
PALB2-201ENST00000261584 C4orf45Q96LM5 186 aa9.09□□□□□ -0.95
PALB2-201ENST00000261584 USB1Q9BQ65 265 aaKnown RBP9.09□□□□□ -0.95
PALB2-201ENST00000261584 TAF9BQ9HBM6 251 aa9.09□□□□□ -0.95
PALB2-201ENST00000261584 MMP25Q9NPA2 562 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms