RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 TMPRSS11AQ6ZMR5 421 aa13.69□□□□□ -0.22
CCDC90B-201ENST00000260054 KCTD20Q7Z5Y7 419 aa13.69□□□□□ -0.22
CCDC90B-201ENST00000260054 NAA40Q86UY6 237 aa13.69□□□□□ -0.22
CCDC90B-201ENST00000260054 DMRTC2Q8IXT2 367 aaPredicted RBP13.69□□□□□ -0.22
CCDC90B-201ENST00000260054 GATAD2BQ8WXI9 593 aa13.69□□□□□ -0.22
CCDC90B-201ENST00000260054 RNF166Q96A37 237 aaPredicted RBP13.69□□□□□ -0.22
CCDC90B-201ENST00000260054 PELI1Q96FA3 418 aa13.69□□□□□ -0.22
CCDC90B-201ENST00000260054 MRPL48Q96GC5 212 aaKnown RBP13.69□□□□□ -0.22
CCDC90B-201ENST00000260054 LSM2Q9Y333 95 aaKnown RBP13.69□□□□□ -0.22
CCDC90B-201ENST00000260054 DPRXA6NFQ7 191 aa13.69□□□□□ -0.22
CCDC90B-201ENST00000260054 PRSS44E7EML9 344 aa13.69□□□□□ -0.22
CCDC90B-201ENST00000260054 M0R135 149 aa13.69□□□□□ -0.22
CCDC90B-201ENST00000260054 SRSF10O75494 262 aaKnown RBP13.69□□□□□ -0.22
CCDC90B-201ENST00000260054 RPP14O95059 124 aaKnown RBP13.69□□□□□ -0.22
CCDC90B-201ENST00000260054 ACSM4P0C7M7 580 aa13.69□□□□□ -0.22
CCDC90B-201ENST00000260054 CD40P25942 277 aa13.69□□□□□ -0.22
CCDC90B-201ENST00000260054 CALCRP30988 508 aa13.69□□□□□ -0.22
CCDC90B-201ENST00000260054 PSMB10P40306 273 aa13.69□□□□□ -0.22
CCDC90B-201ENST00000260054 KIR2DL3P43628 341 aa13.69□□□□□ -0.22
CCDC90B-201ENST00000260054 CX3CR1P49238 355 aa13.69□□□□□ -0.22
CCDC90B-201ENST00000260054 WNT4P56705 351 aa13.69□□□□□ -0.22
CCDC90B-201ENST00000260054 NAAAQ02083 359 aa13.69□□□□□ -0.22
CCDC90B-201ENST00000260054 TBCEQ15813 527 aaPredicted RBP13.69□□□□□ -0.22
CCDC90B-201ENST00000260054 TBC1D28Q2M2D7 210 aa13.69□□□□□ -0.22
CCDC90B-201ENST00000260054 FAM220AQ7Z4H9 259 aa13.69□□□□□ -0.22
CCDC90B-201ENST00000260054 ACBD4Q8NC06 268 aa13.69□□□□□ -0.22
CCDC90B-201ENST00000260054 SPTSSAQ969W0 71 aa13.69□□□□□ -0.22
CCDC90B-201ENST00000260054 ZNF799Q96GE5 643 aa13.69□□□□□ -0.22
CCDC90B-201ENST00000260054 OR5M11Q96RB7 305 aa13.69□□□□□ -0.22
CCDC90B-201ENST00000260054 MND1Q9BWT6 205 aa13.69□□□□□ -0.22
CCDC90B-201ENST00000260054 ACOT13Q9NPJ3 140 aa13.69□□□□□ -0.22
CCDC90B-201ENST00000260054 GRIP1Q9Y3R0 1128 aa13.69□□□□□ -0.22
CCDC90B-201ENST00000260054 SNX5Q9Y5X3 404 aa13.69□□□□□ -0.22
CCDC90B-201ENST00000260054 CADP27708 2225 aa13.68□□□□□ -0.22
CCDC90B-201ENST00000260054 IGHV2OR16-5A0A0B4J2B6 119 aa13.68□□□□□ -0.22
CCDC90B-201ENST00000260054 A1L4Q6 167 aa13.68□□□□□ -0.22
CCDC90B-201ENST00000260054 E9PI62 339 aa13.68□□□□□ -0.22
CCDC90B-201ENST00000260054 PNPP00491 289 aa13.68□□□□□ -0.22
CCDC90B-201ENST00000260054 LALBAP00709 142 aa13.68□□□□□ -0.22
CCDC90B-201ENST00000260054 MT-ND5P03915 603 aa13.68□□□□□ -0.22
CCDC90B-201ENST00000260054 LCKP06239 509 aa13.68□□□□□ -0.22
CCDC90B-201ENST00000260054 TACSTD2P09758 323 aa13.68□□□□□ -0.22
CCDC90B-201ENST00000260054 SMIM18P0DKX4 95 aa13.68□□□□□ -0.22
CCDC90B-201ENST00000260054 SLC2A1P11166 492 aa13.68□□□□□ -0.22
CCDC90B-201ENST00000260054 ZNF35P13682 527 aa13.68□□□□□ -0.22
CCDC90B-201ENST00000260054 PCMT1P22061 227 aa13.68□□□□□ -0.22
CCDC90B-201ENST00000260054 DCTDP32321 178 aa13.68□□□□□ -0.22
CCDC90B-201ENST00000260054 PSMA6P60900 246 aaKnown RBP13.68□□□□□ -0.22
CCDC90B-201ENST00000260054 MFGE8Q08431 387 aaPredicted RBP13.68□□□□□ -0.22
CCDC90B-201ENST00000260054 SPOCK1Q08629 439 aa13.68□□□□□ -0.22
CCDC90B-201ENST00000260054 FOXB2Q5VYV0 432 aa13.68□□□□□ -0.22
CCDC90B-201ENST00000260054 XAF1Q6GPH4 301 aa13.68□□□□□ -0.22
CCDC90B-201ENST00000260054 TMEM108Q6UXF1 575 aa13.68□□□□□ -0.22
CCDC90B-201ENST00000260054 ZNF283Q8N7M2 679 aa13.68□□□□□ -0.22
CCDC90B-201ENST00000260054 RORBQ92753 470 aa13.68□□□□□ -0.22
CCDC90B-201ENST00000260054 DOK1Q99704 481 aa13.68□□□□□ -0.22
CCDC90B-201ENST00000260054 NIPAL2Q9H841 368 aa13.68□□□□□ -0.22
CCDC90B-201ENST00000260054 NGBQ9NPG2 151 aa13.68□□□□□ -0.22
CCDC90B-201ENST00000260054 FAM206AQ9NX38 181 aa13.68□□□□□ -0.22
CCDC90B-201ENST00000260054 A0A087WXM4 84 aa13.67□□□□□ -0.22
CCDC90B-201ENST00000260054 SIAH2O43255 324 aa13.67□□□□□ -0.22
CCDC90B-201ENST00000260054 EPXP11678 715 aa13.67□□□□□ -0.22
CCDC90B-201ENST00000260054 WNT5AP41221 380 aa13.67□□□□□ -0.22
CCDC90B-201ENST00000260054 SLC6A9P48067 706 aa13.67□□□□□ -0.22
CCDC90B-201ENST00000260054 TPTEP56180 551 aa13.67□□□□□ -0.22
CCDC90B-201ENST00000260054 ZNF121P58317 390 aaPredicted RBP13.67□□□□□ -0.22
CCDC90B-201ENST00000260054 BSPH1Q075Z2 132 aa13.67□□□□□ -0.22
CCDC90B-201ENST00000260054 DRAM2Q6UX65 266 aa13.67□□□□□ -0.22
CCDC90B-201ENST00000260054 PRSS45Q7RTY3 260 aa13.67□□□□□ -0.22
CCDC90B-201ENST00000260054 KLBQ86Z14 1044 aa13.67□□□□□ -0.22
CCDC90B-201ENST00000260054 EGFL6Q8IUX8 553 aa13.67□□□□□ -0.22
CCDC90B-201ENST00000260054 ZNF101Q8IZC7 436 aa13.67□□□□□ -0.22
CCDC90B-201ENST00000260054 SVOPQ8N4V2 548 aa13.67□□□□□ -0.22
CCDC90B-201ENST00000260054 OR1J2Q8NGS2 313 aa13.67□□□□□ -0.22
CCDC90B-201ENST00000260054 CDH20Q9HBT6 801 aa13.67□□□□□ -0.22
CCDC90B-201ENST00000260054 VCX3AQ9NNX9 186 aa13.67□□□□□ -0.22
CCDC90B-201ENST00000260054 BRD7Q9NPI1 651 aa13.67□□□□□ -0.22
CCDC90B-201ENST00000260054 BABAM2Q9NXR7 383 aa13.67□□□□□ -0.22
CCDC90B-201ENST00000260054 R4GMQ9 66 aa13.67□□□□□ -0.22
CCDC90B-201ENST00000260054 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.66□□□□□ -0.22
CCDC90B-201ENST00000260054 TMEM269A0A1B0GVZ9 245 aa13.66□□□□□ -0.22
CCDC90B-201ENST00000260054 C5orf63A6NC05 138 aa13.66□□□□□ -0.22
CCDC90B-201ENST00000260054 TRIM64CA6NLI5 447 aa13.66□□□□□ -0.22
CCDC90B-201ENST00000260054 CASKO14936 926 aa13.66□□□□□ -0.22
CCDC90B-201ENST00000260054 ATP6V1B1P15313 513 aa13.66□□□□□ -0.22
CCDC90B-201ENST00000260054 PTAFRP25105 342 aa13.66□□□□□ -0.22
CCDC90B-201ENST00000260054 MMP16P51512 607 aa13.66□□□□□ -0.22
CCDC90B-201ENST00000260054 SPHARQ15513 63 aa13.66□□□□□ -0.22
CCDC90B-201ENST00000260054 MED22Q15528 200 aa13.66□□□□□ -0.22
CCDC90B-201ENST00000260054 ZNF829Q3KNS6 432 aaPredicted RBP13.66□□□□□ -0.22
CCDC90B-201ENST00000260054 NCMAPQ5T1S8 102 aa13.66□□□□□ -0.22
CCDC90B-201ENST00000260054 MEX3BQ6ZN04 569 aaKnown RBP13.66□□□□□ -0.22
CCDC90B-201ENST00000260054 COLCA1Q6ZS62 124 aa13.66□□□□□ -0.22
CCDC90B-201ENST00000260054 IL17RDQ8NFM7 739 aa13.66□□□□□ -0.22
CCDC90B-201ENST00000260054 PPP1R14AQ96A00 147 aa13.66□□□□□ -0.22
CCDC90B-201ENST00000260054 PLPPR2Q96GM1 343 aa13.66□□□□□ -0.22
CCDC90B-201ENST00000260054 C4orf45Q96LM5 186 aa13.66□□□□□ -0.22
CCDC90B-201ENST00000260054 DCLRE1CQ96SD1 692 aaKnown RBP13.66□□□□□ -0.22
CCDC90B-201ENST00000260054 DEFB108AA8MXU0 73 aa13.66□□□□□ -0.22
CCDC90B-201ENST00000260054 ABCD4O14678 606 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms