RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 SECTM1Q8WVN6 248 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 C20orf144Q9BQM9 153 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 PBDC1Q9BVG4 233 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 GPR87Q9BY21 358 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 ANGPTL4Q9BY76 406 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 CAPN10Q9HC96 672 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 MTFP1Q9UDX5 166 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 FBXW2Q9UKT8 454 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 FOXJ3Q9UPW0 622 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 CABIN1Q9Y6J0 2220 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 ASCC3Q8N3C0 2202 aaKnown RBP10.66□□□□□ -0.7
CCNA1-201ENST00000255465 TRBV4-1A0A0J9YWV2 114 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 TRBC2A0A5B9 178 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 IGLON5A6NGN9 336 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 EIF1AYO14602 144 aaKnown RBP10.66□□□□□ -0.7
CCNA1-201ENST00000255465 SLC31A1O15431 190 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 TOMM40O96008 361 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 ARG1P05089 322 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 AKAIN1P0CW23 69 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 TMIGD3P0DMS9 266 aaPredicted RBP10.66□□□□□ -0.7
CCNA1-201ENST00000255465 CHATP28329 748 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 EIF1AXP47813 144 aaKnown RBP10.66□□□□□ -0.7
CCNA1-201ENST00000255465 FHITP49789 147 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 AFF3P51826 1226 aaKnown RBP10.66□□□□□ -0.7
CCNA1-201ENST00000255465 PTTG1IPP53801 180 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 PAX5Q02548 391 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 RUNX2Q13950 521 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 TGIF1Q15583 401 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 TMEM52BQ4KMG9 183 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 BCDIN3DQ7Z5W3 292 aaKnown RBP10.66□□□□□ -0.7
CCNA1-201ENST00000255465 PLPP5Q8NEB5 264 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 OR4E2Q8NGC2 313 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 OR4L1Q8NH43 312 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 ZCCHC10Q8TBK6 192 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 THRSPQ92748 146 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 HAS2Q92819 552 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 CXorf40BQ96DE9 158 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 IMP4Q96G21 291 aaKnown RBP10.66□□□□□ -0.7
CCNA1-201ENST00000255465 SYT3Q9BQG1 590 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 ALKBH7Q9BT30 221 aaPredicted RBP10.66□□□□□ -0.7
CCNA1-201ENST00000255465 C1QTNF2Q9BXJ5 285 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 FSCN3Q9NQT6 498 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 RXFP3Q9NSD7 469 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 SEMA5BQ9P283 1151 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 GULP1Q9UBP9 304 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 DKKL1Q9UK85 242 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 CACNA1AO00555 2505 aa10.65□□□□□ -0.7
CCNA1-201ENST00000255465 UMAD1C9J7I0 102 aa10.65□□□□□ -0.7
CCNA1-201ENST00000255465 C9JQL5 133 aa10.65□□□□□ -0.7
CCNA1-201ENST00000255465 PRAMEF26H0Y7S4 382 aa10.65□□□□□ -0.7
CCNA1-201ENST00000255465 J3KTA2 159 aa10.65□□□□□ -0.7
CCNA1-201ENST00000255465 J3QRE1 110 aa10.65□□□□□ -0.7
CCNA1-201ENST00000255465 LDB2O43679 373 aa10.65□□□□□ -0.7
CCNA1-201ENST00000255465 DNAJB6O75190 326 aa10.65□□□□□ -0.7
CCNA1-201ENST00000255465 SOX14O95416 240 aa10.65□□□□□ -0.7
CCNA1-201ENST00000255465 IGFBP1P08833 259 aaPredicted RBP10.65□□□□□ -0.7
CCNA1-201ENST00000255465 OR5H8P0DN80 308 aa10.65□□□□□ -0.7
CCNA1-201ENST00000255465 LYL1P12980 280 aa10.65□□□□□ -0.7
CCNA1-201ENST00000255465 OR1E2P47887 323 aa10.65□□□□□ -0.7
CCNA1-201ENST00000255465 PDX1P52945 283 aa10.65□□□□□ -0.7
CCNA1-201ENST00000255465 HMGCS1Q01581 520 aa10.65□□□□□ -0.7
CCNA1-201ENST00000255465 OR5I1Q13606 314 aa10.65□□□□□ -0.7
CCNA1-201ENST00000255465 RAB11BQ15907 218 aa10.65□□□□□ -0.7
CCNA1-201ENST00000255465 PRRT3Q5FWE3 981 aa10.65□□□□□ -0.7
CCNA1-201ENST00000255465 ANKRD16Q6P6B7 361 aa10.65□□□□□ -0.7
CCNA1-201ENST00000255465 TRIM40Q6P9F5 258 aa10.65□□□□□ -0.7
CCNA1-201ENST00000255465 PRSS57Q6UWY2 283 aa10.65□□□□□ -0.7
CCNA1-201ENST00000255465 C1orf122Q6ZSJ8 110 aa10.65□□□□□ -0.7
CCNA1-201ENST00000255465 SLC25A26Q70HW3 274 aa10.65□□□□□ -0.7
CCNA1-201ENST00000255465 BHLHA15Q7RTS1 189 aaPredicted RBP10.65□□□□□ -0.7
CCNA1-201ENST00000255465 ADCK2Q7Z695 626 aa10.65□□□□□ -0.7
CCNA1-201ENST00000255465 LINC01551Q86U37 167 aa10.65□□□□□ -0.7
CCNA1-201ENST00000255465 C1orf87Q8N0U7 546 aa10.65□□□□□ -0.7
CCNA1-201ENST00000255465 C11orf42Q8N5U0 333 aa10.65□□□□□ -0.7
CCNA1-201ENST00000255465 LFNGQ8NES3 379 aa10.65□□□□□ -0.7
CCNA1-201ENST00000255465 OR14K1Q8NGZ2 314 aa10.65□□□□□ -0.7
CCNA1-201ENST00000255465 CXorf40AQ8TE69 158 aa10.65□□□□□ -0.7
CCNA1-201ENST00000255465 PPP1R1CQ8WVI7 109 aa10.65□□□□□ -0.7
CCNA1-201ENST00000255465 FAAP24Q9BTP7 215 aa10.65□□□□□ -0.7
CCNA1-201ENST00000255465 SLC35B3Q9H1N7 401 aa10.65□□□□□ -0.7
CCNA1-201ENST00000255465 CBLN4Q9NTU7 201 aa10.65□□□□□ -0.7
CCNA1-201ENST00000255465 MRPL15Q9P015 296 aaKnown RBP10.65□□□□□ -0.7
CCNA1-201ENST00000255465 OSGIN2Q9Y236 505 aa10.65□□□□□ -0.7
CCNA1-201ENST00000255465 CLDN16Q9Y5I7 305 aa10.65□□□□□ -0.7
CCNA1-201ENST00000255465 CFAP54Q96N23 3096 aa10.64□□□□□ -0.71
CCNA1-201ENST00000255465 TMEM235A6NFC5 223 aa10.64□□□□□ -0.71
CCNA1-201ENST00000255465 GPR39O43194 453 aa10.64□□□□□ -0.71
CCNA1-201ENST00000255465 GDF9O60383 454 aa10.64□□□□□ -0.71
CCNA1-201ENST00000255465 OR2J2O76002 312 aa10.64□□□□□ -0.71
CCNA1-201ENST00000255465 AMBPP02760 352 aa10.64□□□□□ -0.71
CCNA1-201ENST00000255465 RPN2P04844 631 aa10.64□□□□□ -0.71
CCNA1-201ENST00000255465 TRGC1P0CF51 173 aa10.64□□□□□ -0.71
CCNA1-201ENST00000255465 HNRNPA2B1P22626 353 aaKnown RBP10.64□□□□□ -0.71
CCNA1-201ENST00000255465 CD34P28906 385 aa10.64□□□□□ -0.71
CCNA1-201ENST00000255465 CD38P28907 300 aa10.64□□□□□ -0.71
CCNA1-201ENST00000255465 APLNRP35414 380 aa10.64□□□□□ -0.71
CCNA1-201ENST00000255465 CAPZBP47756 277 aa10.64□□□□□ -0.71
CCNA1-201ENST00000255465 NPY4RP50391 375 aa10.64□□□□□ -0.71
CCNA1-201ENST00000255465 RPL19P84098 196 aaKnown RBP10.64□□□□□ -0.71
CCNA1-201ENST00000255465 ELOBQ15370 118 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms