RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 OR6M1Q8NGM8 313 aa16.59■□□□□ 0.25
PDLIM4-201ENST00000253754 OR2Y1Q8NGV0 311 aa16.59■□□□□ 0.25
PDLIM4-201ENST00000253754 ADAT3Q96EY9 351 aaPredicted RBP16.59■□□□□ 0.25
PDLIM4-201ENST00000253754 C1orf198Q9H425 327 aa16.59■□□□□ 0.25
PDLIM4-201ENST00000253754 PRAF2O60831 178 aa16.58■□□□□ 0.25
PDLIM4-201ENST00000253754 CD3DP04234 171 aa16.58■□□□□ 0.25
PDLIM4-201ENST00000253754 ZNF782Q6ZMW2 699 aaPredicted RBP16.58■□□□□ 0.25
PDLIM4-201ENST00000253754 TIPARPQ7Z3E1 657 aaKnown RBP16.58■□□□□ 0.25
PDLIM4-201ENST00000253754 JSRP1Q96MG2 331 aaPredicted RBP16.58■□□□□ 0.25
PDLIM4-201ENST00000253754 ZPBPQ9BS86 351 aa16.58■□□□□ 0.25
PDLIM4-201ENST00000253754 SOX7Q9BT81 388 aa16.58■□□□□ 0.25
PDLIM4-201ENST00000253754 ZNF700Q9H0M5 742 aa16.58■□□□□ 0.25
PDLIM4-201ENST00000253754 CDCP1Q9H5V8 836 aa16.58■□□□□ 0.25
PDLIM4-201ENST00000253754 ZNF160Q9HCG1 818 aa16.58■□□□□ 0.25
PDLIM4-201ENST00000253754 ASH2LQ9UBL3 628 aa16.58■□□□□ 0.25
PDLIM4-201ENST00000253754 RHBDD3Q9Y3P4 386 aa16.58■□□□□ 0.25
PDLIM4-201ENST00000253754 EML6Q6ZMW3 1958 aa16.58■□□□□ 0.24
PDLIM4-201ENST00000253754 SDK2Q58EX2 2172 aa16.58■□□□□ 0.24
PDLIM4-201ENST00000253754 IGHV3-15A0A0B4J1V0 119 aa16.58■□□□□ 0.24
PDLIM4-201ENST00000253754 SULT2B1O00204 365 aa16.58■□□□□ 0.24
PDLIM4-201ENST00000253754 CSF1P09603 554 aa16.58■□□□□ 0.24
PDLIM4-201ENST00000253754 ZNF43P17038 809 aa16.58■□□□□ 0.24
PDLIM4-201ENST00000253754 GNALP38405 381 aa16.58■□□□□ 0.24
PDLIM4-201ENST00000253754 HES3Q5TGS1 186 aa16.58■□□□□ 0.24
PDLIM4-201ENST00000253754 KLHL24Q6TFL4 600 aa16.58■□□□□ 0.24
PDLIM4-201ENST00000253754 C6orf15Q6UXA7 325 aaPredicted RBP16.58■□□□□ 0.24
PDLIM4-201ENST00000253754 ADGRE4PQ86SQ3 457 aa16.58■□□□□ 0.24
PDLIM4-201ENST00000253754 ADPRHL1Q8NDY3 354 aa16.58■□□□□ 0.24
PDLIM4-201ENST00000253754 OR2T35Q8NGX2 323 aa16.58■□□□□ 0.24
PDLIM4-201ENST00000253754 WDR89Q96FK6 387 aaPredicted RBP16.58■□□□□ 0.24
PDLIM4-201ENST00000253754 GINS4Q9BRT9 223 aa16.58■□□□□ 0.24
PDLIM4-201ENST00000253754 PROK2Q9HC23 129 aa16.58■□□□□ 0.24
PDLIM4-201ENST00000253754 PCDHGA1Q9Y5H4 931 aa16.58■□□□□ 0.24
PDLIM4-201ENST00000253754 CFAP47Q6ZTR5 3102 aa16.58■□□□□ 0.24
PDLIM4-201ENST00000253754 C9orf172C9J069 976 aa16.57■□□□□ 0.24
PDLIM4-201ENST00000253754 RER1O15258 196 aa16.57■□□□□ 0.24
PDLIM4-201ENST00000253754 TPPPO94811 219 aa16.57■□□□□ 0.24
PDLIM4-201ENST00000253754 VSIG10L2P0DP72 767 aa16.57■□□□□ 0.24
PDLIM4-201ENST00000253754 NAT1P18440 290 aa16.57■□□□□ 0.24
PDLIM4-201ENST00000253754 DNASE1P24855 282 aa16.57■□□□□ 0.24
PDLIM4-201ENST00000253754 SSTR2P30874 369 aa16.57■□□□□ 0.24
PDLIM4-201ENST00000253754 PRKXP51817 358 aa16.57■□□□□ 0.24
PDLIM4-201ENST00000253754 ARPC4P59998 168 aa16.57■□□□□ 0.24
PDLIM4-201ENST00000253754 LYPD6Q86Y78 171 aa16.57■□□□□ 0.24
PDLIM4-201ENST00000253754 OR52N4Q8NGI2 321 aa16.57■□□□□ 0.24
PDLIM4-201ENST00000253754 OR51S1Q8NGJ8 323 aa16.57■□□□□ 0.24
PDLIM4-201ENST00000253754 OR1J2Q8NGS2 313 aa16.57■□□□□ 0.24
PDLIM4-201ENST00000253754 NKD1Q969G9 470 aa16.57■□□□□ 0.24
PDLIM4-201ENST00000253754 CNTD2Q9H8S5 307 aa16.57■□□□□ 0.24
PDLIM4-201ENST00000253754 NPDC1Q9NQX5 325 aaPredicted RBP16.57■□□□□ 0.24
PDLIM4-201ENST00000253754 SLC17A5Q9NRA2 495 aa16.57■□□□□ 0.24
PDLIM4-201ENST00000253754 NPTNQ9Y639 398 aa16.57■□□□□ 0.24
PDLIM4-201ENST00000253754 A0A1B0GVI7 797 aa16.57■□□□□ 0.24
PDLIM4-201ENST00000253754 SYT7O43581 403 aa16.57■□□□□ 0.24
PDLIM4-201ENST00000253754 QDPRP09417 244 aa16.57■□□□□ 0.24
PDLIM4-201ENST00000253754 CD37P11049 281 aa16.57■□□□□ 0.24
PDLIM4-201ENST00000253754 TCN2P20062 427 aa16.57■□□□□ 0.24
PDLIM4-201ENST00000253754 FOLR3P41439 243 aa16.57■□□□□ 0.24
PDLIM4-201ENST00000253754 RPS18P62269 152 aaKnown RBP16.57■□□□□ 0.24
PDLIM4-201ENST00000253754 ZNF468Q5VIY5 522 aaPredicted RBP16.57■□□□□ 0.24
PDLIM4-201ENST00000253754 RNF144BQ7Z419 303 aa16.57■□□□□ 0.24
PDLIM4-201ENST00000253754 ELMOD2Q8IZ81 293 aa16.57■□□□□ 0.24
PDLIM4-201ENST00000253754 OR51E1Q8TCB6 317 aa16.57■□□□□ 0.24
PDLIM4-201ENST00000253754 SEH1LQ96EE3 360 aa16.57■□□□□ 0.24
PDLIM4-201ENST00000253754 GPR137Q96N19 417 aa16.57■□□□□ 0.24
PDLIM4-201ENST00000253754 OXGR1Q96P68 337 aa16.57■□□□□ 0.24
PDLIM4-201ENST00000253754 DDA1Q9BW61 102 aa16.57■□□□□ 0.24
PDLIM4-201ENST00000253754 EMC3Q9P0I2 261 aa16.57■□□□□ 0.24
PDLIM4-201ENST00000253754 MGAT4CQ9UBM8 478 aa16.57■□□□□ 0.24
PDLIM4-201ENST00000253754 CCDC187A0A096LP49 1063 aa16.56■□□□□ 0.24
PDLIM4-201ENST00000253754 AQP7P3A6NL99 342 aa16.56■□□□□ 0.24
PDLIM4-201ENST00000253754 LDLRAD4O15165 306 aa16.56■□□□□ 0.24
PDLIM4-201ENST00000253754 EIF1P41567 113 aaKnown RBP16.56■□□□□ 0.24
PDLIM4-201ENST00000253754 SLC25A47Q6Q0C1 308 aa16.56■□□□□ 0.24
PDLIM4-201ENST00000253754 CLEC1AQ8NC01 280 aa16.56■□□□□ 0.24
PDLIM4-201ENST00000253754 ACBD4Q8NC06 268 aa16.56■□□□□ 0.24
PDLIM4-201ENST00000253754 OR6X1Q8NH79 312 aa16.56■□□□□ 0.24
PDLIM4-201ENST00000253754 GPX8Q8TED1 209 aa16.56■□□□□ 0.24
PDLIM4-201ENST00000253754 SCP2D1Q9UJQ7 156 aa16.56■□□□□ 0.24
PDLIM4-201ENST00000253754 ARPC4-TTLL3A0A0A6YYG9 625 aa16.56■□□□□ 0.24
PDLIM4-201ENST00000253754 LOC390937A0A1W2PQ73 354 aa16.56■□□□□ 0.24
PDLIM4-201ENST00000253754 RLN1P04808 185 aa16.56■□□□□ 0.24
PDLIM4-201ENST00000253754 FAUP35544 74 aaKnown RBP16.56■□□□□ 0.24
PDLIM4-201ENST00000253754 CLDN17P56750 224 aa16.56■□□□□ 0.24
PDLIM4-201ENST00000253754 GPR85P60893 370 aa16.56■□□□□ 0.24
PDLIM4-201ENST00000253754 UBE2MP61081 183 aaKnown RBP16.56■□□□□ 0.24
PDLIM4-201ENST00000253754 RBMS2Q15434 407 aaKnown RBP16.56■□□□□ 0.24
PDLIM4-201ENST00000253754 LGALSLQ3ZCW2 172 aaPredicted RBP16.56■□□□□ 0.24
PDLIM4-201ENST00000253754 RAET1LQ5VY80 246 aa16.56■□□□□ 0.24
PDLIM4-201ENST00000253754 ZNF813Q6ZN06 617 aa16.56■□□□□ 0.24
PDLIM4-201ENST00000253754 PIP4P1Q86T03 277 aa16.56■□□□□ 0.24
PDLIM4-201ENST00000253754 DEFB124Q8NES8 71 aa16.56■□□□□ 0.24
PDLIM4-201ENST00000253754 OR8H1Q8NGG4 311 aa16.56■□□□□ 0.24
PDLIM4-201ENST00000253754 SLC25A43Q8WUT9 341 aaPredicted RBP16.56■□□□□ 0.24
PDLIM4-201ENST00000253754 UTP23Q9BRU9 249 aaKnown RBP16.56■□□□□ 0.24
PDLIM4-201ENST00000253754 FOXJ2Q9P0K8 574 aa16.56■□□□□ 0.24
PDLIM4-201ENST00000253754 HDGFL3Q9Y3E1 203 aa16.56■□□□□ 0.24
PDLIM4-201ENST00000253754 PHF3Q92576 2039 aaKnown RBP16.55■□□□□ 0.24
PDLIM4-201ENST00000253754 ZFHX4Q86UP3 3567 aa16.55■□□□□ 0.24
PDLIM4-201ENST00000253754 LRP3O75074 770 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms