RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 SLC7A2P52569 658 aa8.63□□□□□ -1.03
VPS50-201ENST00000251739 LIPEQ05469 1076 aa8.63□□□□□ -1.03
VPS50-201ENST00000251739 DGCR6Q14129 220 aa8.63□□□□□ -1.03
VPS50-201ENST00000251739 ZNF181Q2M3W8 571 aa8.63□□□□□ -1.03
VPS50-201ENST00000251739 RSPO1Q2MKA7 263 aaPredicted RBP8.63□□□□□ -1.03
VPS50-201ENST00000251739 KRTAP27-1Q3LI81 207 aa8.63□□□□□ -1.03
VPS50-201ENST00000251739 ESCO2Q56NI9 601 aa8.63□□□□□ -1.03
VPS50-201ENST00000251739 OTPQ5XKR4 325 aa8.63□□□□□ -1.03
VPS50-201ENST00000251739 GPR139Q6DWJ6 353 aa8.63□□□□□ -1.03
VPS50-201ENST00000251739 COLCA1Q6ZS62 124 aa8.63□□□□□ -1.03
VPS50-201ENST00000251739 GLB1L2Q8IW92 636 aa8.63□□□□□ -1.03
VPS50-201ENST00000251739 POU5F2Q8N7G0 328 aa8.63□□□□□ -1.03
VPS50-201ENST00000251739 OR8G5Q8NG78 346 aa8.63□□□□□ -1.03
VPS50-201ENST00000251739 OR1F12Q8NHA8 337 aa8.63□□□□□ -1.03
VPS50-201ENST00000251739 WFDC12Q8WWY7 111 aa8.63□□□□□ -1.03
VPS50-201ENST00000251739 PTP4A1Q93096 173 aa8.63□□□□□ -1.03
VPS50-201ENST00000251739 UPRTQ96BW1 309 aa8.63□□□□□ -1.03
VPS50-201ENST00000251739 FAM46AQ96IP4 442 aaKnown RBP8.63□□□□□ -1.03
VPS50-201ENST00000251739 MEGF10Q96KG7 1140 aa8.63□□□□□ -1.03
VPS50-201ENST00000251739 DHRS1Q96LJ7 313 aa8.63□□□□□ -1.03
VPS50-201ENST00000251739 GPA33Q99795 319 aa8.63□□□□□ -1.03
VPS50-201ENST00000251739 FUZQ9BT04 418 aa8.63□□□□□ -1.03
VPS50-201ENST00000251739 TMEM165Q9HC07 324 aa8.63□□□□□ -1.03
VPS50-201ENST00000251739 ARMCX1Q9P291 453 aa8.63□□□□□ -1.03
VPS50-201ENST00000251739 OR5V1Q9UGF6 321 aa8.63□□□□□ -1.03
VPS50-201ENST00000251739 IL20RAQ9UHF4 553 aa8.63□□□□□ -1.03
VPS50-201ENST00000251739 LHFPL6Q9Y693 200 aa8.63□□□□□ -1.03
VPS50-201ENST00000251739 IGLV1-36A0A0B4J1U3 117 aa8.62□□□□□ -1.03
VPS50-201ENST00000251739 IGHV2-70DA0A0C4DH43 119 aa8.62□□□□□ -1.03
VPS50-201ENST00000251739 DCTN6O00399 190 aa8.62□□□□□ -1.03
VPS50-201ENST00000251739 RER1O15258 196 aa8.62□□□□□ -1.03
VPS50-201ENST00000251739 SLC16A7O60669 478 aa8.62□□□□□ -1.03
VPS50-201ENST00000251739 KHDRBS3O75525 346 aaKnown RBP8.62□□□□□ -1.03
VPS50-201ENST00000251739 NDUFB2O95178 105 aa8.62□□□□□ -1.03
VPS50-201ENST00000251739 ZNF682O95780 498 aa8.62□□□□□ -1.03
VPS50-201ENST00000251739 IGHV4-38-2P0DP08 117 aa8.62□□□□□ -1.03
VPS50-201ENST00000251739 NOS3P29474 1203 aa8.62□□□□□ -1.03
VPS50-201ENST00000251739 OMPP47874 163 aa8.62□□□□□ -1.03
VPS50-201ENST00000251739 COX10Q12887 443 aa8.62□□□□□ -1.03
VPS50-201ENST00000251739 HLXQ14774 488 aaPredicted RBP8.62□□□□□ -1.03
VPS50-201ENST00000251739 OR2T2Q6IF00 324 aa8.62□□□□□ -1.03
VPS50-201ENST00000251739 RBMS3Q6XE24 437 aaKnown RBP8.62□□□□□ -1.03
VPS50-201ENST00000251739 Q6ZS46 218 aa8.62□□□□□ -1.03
VPS50-201ENST00000251739 PARP8Q8N3A8 854 aa8.62□□□□□ -1.03
VPS50-201ENST00000251739 OR10AD1Q8NGE0 317 aa8.62□□□□□ -1.03
VPS50-201ENST00000251739 RP9Q8TA86 221 aaKnown RBP8.62□□□□□ -1.03
VPS50-201ENST00000251739 APOBEC3DQ96AK3 386 aaPredicted RBP8.62□□□□□ -1.03
VPS50-201ENST00000251739 RSRC1Q96IZ7 334 aaKnown RBP8.62□□□□□ -1.03
VPS50-201ENST00000251739 C7orf34Q96L11 122 aa8.62□□□□□ -1.03
VPS50-201ENST00000251739 DUX5Q96PT3 197 aa8.62□□□□□ -1.03
VPS50-201ENST00000251739 COQ7Q99807 217 aa8.62□□□□□ -1.03
VPS50-201ENST00000251739 SLC30A2Q9BRI3 323 aa8.62□□□□□ -1.03
VPS50-201ENST00000251739 MRI1Q9BV20 369 aa8.62□□□□□ -1.03
VPS50-201ENST00000251739 NUAK2Q9H093 628 aa8.62□□□□□ -1.03
VPS50-201ENST00000251739 HDHD2Q9H0R4 259 aa8.62□□□□□ -1.03
VPS50-201ENST00000251739 PRDM13Q9H4Q3 707 aa8.62□□□□□ -1.03
VPS50-201ENST00000251739 CCDC134Q9H6E4 229 aa8.62□□□□□ -1.03
VPS50-201ENST00000251739 NDUFAF4Q9P032 175 aa8.62□□□□□ -1.03
VPS50-201ENST00000251739 ABCD2Q9UBJ2 740 aa8.62□□□□□ -1.03
VPS50-201ENST00000251739 COA3Q9Y2R0 106 aaPredicted RBP8.62□□□□□ -1.03
VPS50-201ENST00000251739 TRBV4-1A0A0J9YWV2 114 aa8.61□□□□□ -1.03
VPS50-201ENST00000251739 IQCF6A8MYZ5 107 aa8.61□□□□□ -1.03
VPS50-201ENST00000251739 H0YL77 283 aa8.61□□□□□ -1.03
VPS50-201ENST00000251739 SERPINA1P01009 418 aa8.61□□□□□ -1.03
VPS50-201ENST00000251739 COX4I1P13073 169 aa8.61□□□□□ -1.03
VPS50-201ENST00000251739 PMELP40967 661 aa8.61□□□□□ -1.03
VPS50-201ENST00000251739 CDKN2AP42771 156 aaKnown RBP8.61□□□□□ -1.03
VPS50-201ENST00000251739 TAGLNQ01995 201 aaKnown RBP8.61□□□□□ -1.03
VPS50-201ENST00000251739 SF3A3Q12874 501 aaKnown RBP eCLIP8.61□□□□□ -1.03
VPS50-201ENST00000251739 SEC23BQ15437 767 aa8.61□□□□□ -1.03
VPS50-201ENST00000251739 SLC9A3R2Q15599 337 aa8.61□□□□□ -1.03
VPS50-201ENST00000251739 ZNF404Q494X3 552 aa8.61□□□□□ -1.03
VPS50-201ENST00000251739 SLC27A4Q6P1M0 643 aa8.61□□□□□ -1.03
VPS50-201ENST00000251739 C1orf94Q6P1W5 598 aa8.61□□□□□ -1.03
VPS50-201ENST00000251739 LEG1Q6P5S2 330 aa8.61□□□□□ -1.03
VPS50-201ENST00000251739 PGM2L1Q6PCE3 622 aa8.61□□□□□ -1.03
VPS50-201ENST00000251739 HACD2Q6Y1H2 254 aa8.61□□□□□ -1.03
VPS50-201ENST00000251739 KLBQ86Z14 1044 aa8.61□□□□□ -1.03
VPS50-201ENST00000251739 OR5AS1Q8N127 324 aa8.61□□□□□ -1.03
VPS50-201ENST00000251739 SLC26A10Q8NG04 563 aa8.61□□□□□ -1.03
VPS50-201ENST00000251739 OR13G1Q8NGZ3 307 aa8.61□□□□□ -1.03
VPS50-201ENST00000251739 ZNF420Q8TAQ5 688 aaPredicted RBP8.61□□□□□ -1.03
VPS50-201ENST00000251739 TSSK2Q96PF2 358 aa8.61□□□□□ -1.03
VPS50-201ENST00000251739 TMEM246Q9BRR3 403 aa8.61□□□□□ -1.03
VPS50-201ENST00000251739 SSBP3Q9BWW4 388 aaPredicted RBP8.61□□□□□ -1.03
VPS50-201ENST00000251739 NDEL1Q9GZM8 345 aa8.61□□□□□ -1.03
VPS50-201ENST00000251739 PTTG3PQ9NZH4 202 aa8.61□□□□□ -1.03
VPS50-201ENST00000251739 KIR2DS1A0A191URI9 304 aa8.6□□□□□ -1.03
VPS50-201ENST00000251739 F5H5P2 479 aa8.6□□□□□ -1.03
VPS50-201ENST00000251739 SOCS2O14508 198 aa8.6□□□□□ -1.03
VPS50-201ENST00000251739 PPP1R3DO95685 299 aa8.6□□□□□ -1.03
VPS50-201ENST00000251739 GPANK1O95872 356 aa8.6□□□□□ -1.03
VPS50-201ENST00000251739 H1F0P07305 194 aaKnown RBP8.6□□□□□ -1.03
VPS50-201ENST00000251739 RPS2P15880 293 aaKnown RBP8.6□□□□□ -1.03
VPS50-201ENST00000251739 CALRP27797 417 aaKnown RBP8.6□□□□□ -1.03
VPS50-201ENST00000251739 SRP9P49458 86 aaKnown RBP8.6□□□□□ -1.03
VPS50-201ENST00000251739 RAD23AP54725 363 aa8.6□□□□□ -1.03
VPS50-201ENST00000251739 IL13RA1P78552 427 aa8.6□□□□□ -1.03
VPS50-201ENST00000251739 BAMBIQ13145 260 aa8.6□□□□□ -1.03
VPS50-201ENST00000251739 MEP1BQ16820 701 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms