RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 UNC119Q13432 240 aa17.34■□□□□ 0.37
CDC42EP1-201ENST00000249014 IDO2Q6ZQW0 420 aa17.34■□□□□ 0.37
CDC42EP1-201ENST00000249014 FADS6Q8N9I5 356 aa17.34■□□□□ 0.37
CDC42EP1-201ENST00000249014 FOXRED1Q96CU9 486 aaPredicted RBP17.34■□□□□ 0.37
CDC42EP1-201ENST00000249014 TMPRSS13Q9BYE2 586 aa17.34■□□□□ 0.37
CDC42EP1-201ENST00000249014 MCRIP1C9JLW8 97 aa17.33■□□□□ 0.37
CDC42EP1-201ENST00000249014 RAB27BO00194 218 aa17.33■□□□□ 0.37
CDC42EP1-201ENST00000249014 MELTFP08582 738 aa17.33■□□□□ 0.37
CDC42EP1-201ENST00000249014 ZNF735P0CB33 412 aa17.33■□□□□ 0.37
CDC42EP1-201ENST00000249014 ZNF35P13682 527 aa17.33■□□□□ 0.37
CDC42EP1-201ENST00000249014 PCOLCEQ15113 449 aa17.33■□□□□ 0.37
CDC42EP1-201ENST00000249014 C4orf46Q504U0 113 aa17.33■□□□□ 0.37
CDC42EP1-201ENST00000249014 OR1M1Q8NGA1 313 aa17.33■□□□□ 0.37
CDC42EP1-201ENST00000249014 CMBLQ96DG6 245 aa17.33■□□□□ 0.37
CDC42EP1-201ENST00000249014 A0A1B0GTI1 187 aa17.33■□□□□ 0.36
CDC42EP1-201ENST00000249014 AMY2AP04746 511 aa17.33■□□□□ 0.36
CDC42EP1-201ENST00000249014 RAB6AP20340 208 aa17.33■□□□□ 0.36
CDC42EP1-201ENST00000249014 HSD11B1P28845 292 aa17.33■□□□□ 0.36
CDC42EP1-201ENST00000249014 TMEM176BQ3YBM2 270 aaPredicted RBP17.33■□□□□ 0.36
CDC42EP1-201ENST00000249014 CLLU1Q5K131 121 aa17.33■□□□□ 0.36
CDC42EP1-201ENST00000249014 B3GNTL1Q67FW5 361 aaPredicted RBP17.33■□□□□ 0.36
CDC42EP1-201ENST00000249014 SLC25A47Q6Q0C1 308 aa17.33■□□□□ 0.36
CDC42EP1-201ENST00000249014 OR4S1Q8NGB4 309 aa17.33■□□□□ 0.36
CDC42EP1-201ENST00000249014 OR4K17Q8NGC6 315 aa17.33■□□□□ 0.36
CDC42EP1-201ENST00000249014 IFI44Q8TCB0 444 aa17.33■□□□□ 0.36
CDC42EP1-201ENST00000249014 OR51E1Q8TCB6 317 aa17.33■□□□□ 0.36
CDC42EP1-201ENST00000249014 AQP3Q92482 292 aa17.33■□□□□ 0.36
CDC42EP1-201ENST00000249014 SOX7Q9BT81 388 aa17.33■□□□□ 0.36
CDC42EP1-201ENST00000249014 SLCO5A1Q9H2Y9 848 aa17.33■□□□□ 0.36
CDC42EP1-201ENST00000249014 GAREM1Q9H706 876 aa17.33■□□□□ 0.36
CDC42EP1-201ENST00000249014 TMEM138Q9NPI0 162 aa17.33■□□□□ 0.36
CDC42EP1-201ENST00000249014 L7N2F9 121 aa17.32■□□□□ 0.36
CDC42EP1-201ENST00000249014 CYB5AP00167 134 aa17.32■□□□□ 0.36
CDC42EP1-201ENST00000249014 QRFPP83859 136 aa17.32■□□□□ 0.36
CDC42EP1-201ENST00000249014 ZNF260Q3ZCT1 412 aa17.32■□□□□ 0.36
CDC42EP1-201ENST00000249014 RNF144BQ7Z419 303 aa17.32■□□□□ 0.36
CDC42EP1-201ENST00000249014 OR13C9Q8NGT0 318 aa17.32■□□□□ 0.36
CDC42EP1-201ENST00000249014 TNFAIP8L1Q8WVP5 186 aa17.32■□□□□ 0.36
CDC42EP1-201ENST00000249014 FAM46BQ96A09 425 aa17.32■□□□□ 0.36
CDC42EP1-201ENST00000249014 SFXN2Q96NB2 322 aa17.32■□□□□ 0.36
CDC42EP1-201ENST00000249014 ALX4Q9H161 411 aaPredicted RBP17.32■□□□□ 0.36
CDC42EP1-201ENST00000249014 RAB22AQ9UL26 194 aa17.32■□□□□ 0.36
CDC42EP1-201ENST00000249014 POLR1DQ9Y2S0 133 aa17.32■□□□□ 0.36
CDC42EP1-201ENST00000249014 ZNF736B4DX44 427 aaPredicted RBP17.32■□□□□ 0.36
CDC42EP1-201ENST00000249014 ZNF878C9JN71 531 aa17.32■□□□□ 0.36
CDC42EP1-201ENST00000249014 CD74P04233 296 aa17.32■□□□□ 0.36
CDC42EP1-201ENST00000249014 SLC2A1P11166 492 aa17.32■□□□□ 0.36
CDC42EP1-201ENST00000249014 FGF5P12034 268 aa17.32■□□□□ 0.36
CDC42EP1-201ENST00000249014 ZNF529Q6P280 563 aa17.32■□□□□ 0.36
CDC42EP1-201ENST00000249014 CHMP1BQ7LBR1 199 aa17.32■□□□□ 0.36
CDC42EP1-201ENST00000249014 CDH26Q8IXH8 852 aa17.32■□□□□ 0.36
CDC42EP1-201ENST00000249014 OR6X1Q8NH79 312 aa17.32■□□□□ 0.36
CDC42EP1-201ENST00000249014 ANGPTL6Q8NI99 470 aa17.32■□□□□ 0.36
CDC42EP1-201ENST00000249014 NAT6Q93015 286 aa17.32■□□□□ 0.36
CDC42EP1-201ENST00000249014 OXGR1Q96P68 337 aa17.32■□□□□ 0.36
CDC42EP1-201ENST00000249014 ASH2LQ9UBL3 628 aa17.32■□□□□ 0.36
CDC42EP1-201ENST00000249014 FARSAQ9Y285 508 aaKnown RBP17.32■□□□□ 0.36
CDC42EP1-201ENST00000249014 MAB21L2Q9Y586 359 aa17.32■□□□□ 0.36
CDC42EP1-201ENST00000249014 TMEM82A0PJX8 343 aa17.31■□□□□ 0.36
CDC42EP1-201ENST00000249014 F5H5P2 479 aa17.31■□□□□ 0.36
CDC42EP1-201ENST00000249014 RER1O15258 196 aa17.31■□□□□ 0.36
CDC42EP1-201ENST00000249014 OR4E1P0C645 316 aa17.31■□□□□ 0.36
CDC42EP1-201ENST00000249014 VSIG8P0DPA2 414 aa17.31■□□□□ 0.36
CDC42EP1-201ENST00000249014 PRKXP51817 358 aa17.31■□□□□ 0.36
CDC42EP1-201ENST00000249014 CAMK2BQ13554 666 aa17.31■□□□□ 0.36
CDC42EP1-201ENST00000249014 TOR2AQ5JU69 321 aa17.31■□□□□ 0.36
CDC42EP1-201ENST00000249014 SLC22A24Q8N4F4 322 aa17.31■□□□□ 0.36
CDC42EP1-201ENST00000249014 OR2AJ1Q8NGZ0 328 aa17.31■□□□□ 0.36
CDC42EP1-201ENST00000249014 SLC6A7Q99884 636 aa17.31■□□□□ 0.36
CDC42EP1-201ENST00000249014 ZNF319Q9P2F9 582 aa17.31■□□□□ 0.36
CDC42EP1-201ENST00000249014 METTL21EPA6NDL7 271 aa17.3■□□□□ 0.36
CDC42EP1-201ENST00000249014 ARPC5O15511 151 aa17.3■□□□□ 0.36
CDC42EP1-201ENST00000249014 ZNF43P17038 809 aa17.3■□□□□ 0.36
CDC42EP1-201ENST00000249014 SEC61A1P61619 476 aaKnown RBP17.3■□□□□ 0.36
CDC42EP1-201ENST00000249014 HIST3H3Q16695 136 aa17.3■□□□□ 0.36
CDC42EP1-201ENST00000249014 TMED4Q7Z7H5 227 aa17.3■□□□□ 0.36
CDC42EP1-201ENST00000249014 BPIFB2Q8N4F0 458 aa17.3■□□□□ 0.36
CDC42EP1-201ENST00000249014 OR5D14Q8NGL3 314 aa17.3■□□□□ 0.36
CDC42EP1-201ENST00000249014 SLC25A21Q9BQT8 299 aaPredicted RBP17.3■□□□□ 0.36
CDC42EP1-201ENST00000249014 PNRC2Q9NPJ4 139 aaKnown RBP17.3■□□□□ 0.36
CDC42EP1-201ENST00000249014 SLC5A6Q9Y289 635 aa17.3■□□□□ 0.36
CDC42EP1-201ENST00000249014 LOC102723996A0A087X1L8 192 aa17.3■□□□□ 0.36
CDC42EP1-201ENST00000249014 AQP7P3A6NL99 342 aa17.3■□□□□ 0.36
CDC42EP1-201ENST00000249014 RGS11O94810 467 aa17.3■□□□□ 0.36
CDC42EP1-201ENST00000249014 UMODP07911 640 aa17.3■□□□□ 0.36
CDC42EP1-201ENST00000249014 QDPRP09417 244 aa17.3■□□□□ 0.36
CDC42EP1-201ENST00000249014 ABOP16442 354 aa17.3■□□□□ 0.36
CDC42EP1-201ENST00000249014 RAB3AP20336 220 aa17.3■□□□□ 0.36
CDC42EP1-201ENST00000249014 GABREP78334 506 aa17.3■□□□□ 0.36
CDC42EP1-201ENST00000249014 ATPAF1Q5TC12 328 aaPredicted RBP17.3■□□□□ 0.36
CDC42EP1-201ENST00000249014 RTN4RL2Q86UN3 420 aa17.3■□□□□ 0.36
CDC42EP1-201ENST00000249014 FJX1Q86VR8 437 aa17.3■□□□□ 0.36
CDC42EP1-201ENST00000249014 OR13C8Q8NGS7 320 aa17.3■□□□□ 0.36
CDC42EP1-201ENST00000249014 MAFAQ8NHW3 353 aaPredicted RBP17.3■□□□□ 0.36
CDC42EP1-201ENST00000249014 SPACA5Q96QH8 159 aa17.3■□□□□ 0.36
CDC42EP1-201ENST00000249014 WDR54Q9H977 334 aa17.3■□□□□ 0.36
CDC42EP1-201ENST00000249014 GLTPQ9NZD2 209 aa17.3■□□□□ 0.36
CDC42EP1-201ENST00000249014 UPB1Q9UBR1 384 aa17.3■□□□□ 0.36
CDC42EP1-201ENST00000249014 IGHV1-45A0A0A0MS14 117 aa17.29■□□□□ 0.36
CDC42EP1-201ENST00000249014 SULT2B1O00204 365 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms