RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 OR9K2Q8NGE7 335 aa16.93■□□□□ 0.3
YBX3-201ENST00000228251 OR4D6Q8NGJ1 314 aa16.93■□□□□ 0.3
YBX3-201ENST00000228251 OR2AJ1Q8NGZ0 328 aa16.93■□□□□ 0.3
YBX3-201ENST00000228251 FGGYQ96C11 551 aa16.93■□□□□ 0.3
YBX3-201ENST00000228251 FOXRED1Q96CU9 486 aaPredicted RBP16.93■□□□□ 0.3
YBX3-201ENST00000228251 PIGQQ9BRB3 760 aa16.93■□□□□ 0.3
YBX3-201ENST00000228251 FOXD3Q9UJU5 478 aaPredicted RBP16.93■□□□□ 0.3
YBX3-201ENST00000228251 A0A0A6YYH2 397 aa16.92■□□□□ 0.3
YBX3-201ENST00000228251 DCDC2BA2VCK2 349 aa16.92■□□□□ 0.3
YBX3-201ENST00000228251 A6NJ64 397 aa16.92■□□□□ 0.3
YBX3-201ENST00000228251 SMLR1H3BR10 107 aa16.92■□□□□ 0.3
YBX3-201ENST00000228251 TERTO14746 1132 aaKnown RBP16.92■□□□□ 0.3
YBX3-201ENST00000228251 RER1O15258 196 aa16.92■□□□□ 0.3
YBX3-201ENST00000228251 TLX3O43711 291 aaPredicted RBP16.92■□□□□ 0.3
YBX3-201ENST00000228251 PRAF2O60831 178 aa16.92■□□□□ 0.3
YBX3-201ENST00000228251 RBBP9O75884 186 aa16.92■□□□□ 0.3
YBX3-201ENST00000228251 NDUFB6O95139 128 aa16.92■□□□□ 0.3
YBX3-201ENST00000228251 SERPINA7P05543 415 aa16.92■□□□□ 0.3
YBX3-201ENST00000228251 NR2C1P13056 603 aa16.92■□□□□ 0.3
YBX3-201ENST00000228251 CSNK2A1P68400 391 aaPredicted RBP16.92■□□□□ 0.3
YBX3-201ENST00000228251 HIST1H3AP68431 136 aa16.92■□□□□ 0.3
YBX3-201ENST00000228251 GUCA2AQ02747 115 aa16.92■□□□□ 0.3
YBX3-201ENST00000228251 ANGPT1Q15389 498 aa16.92■□□□□ 0.3
YBX3-201ENST00000228251 HIST2H3PS2Q5TEC6 136 aa16.92■□□□□ 0.3
YBX3-201ENST00000228251 FAAP20Q6NZ36 180 aa16.92■□□□□ 0.3
YBX3-201ENST00000228251 HIST2H3AQ71DI3 136 aa16.92■□□□□ 0.3
YBX3-201ENST00000228251 NABP1Q96AH0 204 aa16.92■□□□□ 0.3
YBX3-201ENST00000228251 SRXN1Q9BYN0 137 aa16.92■□□□□ 0.3
YBX3-201ENST00000228251 ZFP64Q9NPA5 681 aa16.92■□□□□ 0.3
YBX3-201ENST00000228251 ZNF319Q9P2F9 582 aa16.92■□□□□ 0.3
YBX3-201ENST00000228251 NPTNQ9Y639 398 aa16.92■□□□□ 0.3
YBX3-201ENST00000228251 SYT7O43581 403 aa16.92■□□□□ 0.3
YBX3-201ENST00000228251 ICMTO60725 284 aa16.92■□□□□ 0.3
YBX3-201ENST00000228251 RAB6AP20340 208 aa16.92■□□□□ 0.3
YBX3-201ENST00000228251 CSNK1A1P48729 337 aa16.92■□□□□ 0.3
YBX3-201ENST00000228251 VEGFCP49767 419 aa16.92■□□□□ 0.3
YBX3-201ENST00000228251 QRFPP83859 136 aa16.92■□□□□ 0.3
YBX3-201ENST00000228251 GGNQ86UU5 652 aa16.92■□□□□ 0.3
YBX3-201ENST00000228251 CLEC1AQ8NC01 280 aa16.92■□□□□ 0.3
YBX3-201ENST00000228251 OR8B12Q8NGG6 310 aa16.92■□□□□ 0.3
YBX3-201ENST00000228251 JSRP1Q96MG2 331 aaPredicted RBP16.92■□□□□ 0.3
YBX3-201ENST00000228251 NAA11Q9BSU3 229 aaPredicted RBP16.92■□□□□ 0.3
YBX3-201ENST00000228251 SLA2Q9H6Q3 261 aa16.92■□□□□ 0.3
YBX3-201ENST00000228251 P4HTMQ9NXG6 502 aa16.92■□□□□ 0.3
YBX3-201ENST00000228251 TAS2R8Q9NYW2 309 aa16.92■□□□□ 0.3
YBX3-201ENST00000228251 MEIKINA0A087WXM9 373 aa16.91■□□□□ 0.3
YBX3-201ENST00000228251 IGHV3-15A0A0B4J1V0 119 aa16.91■□□□□ 0.3
YBX3-201ENST00000228251 SULT1C2O00338 296 aa16.91■□□□□ 0.3
YBX3-201ENST00000228251 SMAD9O15198 467 aaKnown RBP16.91■□□□□ 0.3
YBX3-201ENST00000228251 FABP7O15540 132 aa16.91■□□□□ 0.3
YBX3-201ENST00000228251 IGLV3-1P01715 115 aa16.91■□□□□ 0.3
YBX3-201ENST00000228251 BDKRB2P30411 391 aa16.91■□□□□ 0.3
YBX3-201ENST00000228251 ZNF121P58317 390 aaPredicted RBP16.91■□□□□ 0.3
YBX3-201ENST00000228251 ZP1P60852 638 aa16.91■□□□□ 0.3
YBX3-201ENST00000228251 ENDOGQ14249 297 aaKnown RBP16.91■□□□□ 0.3
YBX3-201ENST00000228251 CSRP2Q16527 193 aa16.91■□□□□ 0.3
YBX3-201ENST00000228251 ACER2Q5QJU3 275 aa16.91■□□□□ 0.3
YBX3-201ENST00000228251 TMEM53Q6P2H8 277 aa16.91■□□□□ 0.3
YBX3-201ENST00000228251 BEST4Q8NFU0 473 aa16.91■□□□□ 0.3
YBX3-201ENST00000228251 OR1M1Q8NGA1 313 aa16.91■□□□□ 0.3
YBX3-201ENST00000228251 OR4C16Q8NGL9 310 aa16.91■□□□□ 0.3
YBX3-201ENST00000228251 ZNF416Q9BWM5 594 aa16.91■□□□□ 0.3
YBX3-201ENST00000228251 ATG5Q9H1Y0 275 aa16.91■□□□□ 0.3
YBX3-201ENST00000228251 NPDC1Q9NQX5 325 aaPredicted RBP16.91■□□□□ 0.3
YBX3-201ENST00000228251 POLR1DQ9Y2S0 133 aa16.91■□□□□ 0.3
YBX3-201ENST00000228251 WIPF3A6NGB9 483 aa16.9■□□□□ 0.3
YBX3-201ENST00000228251 P04436 131 aa16.9■□□□□ 0.3
YBX3-201ENST00000228251 CSF1P09603 554 aa16.9■□□□□ 0.3
YBX3-201ENST00000228251 PRSS3P35030 304 aa16.9■□□□□ 0.3
YBX3-201ENST00000228251 CAPZA1P52907 286 aa16.9■□□□□ 0.3
YBX3-201ENST00000228251 NDUFA5Q16718 116 aa16.9■□□□□ 0.3
YBX3-201ENST00000228251 PCGF3Q3KNV8 242 aa16.9■□□□□ 0.3
YBX3-201ENST00000228251 JAGN1Q8N5M9 183 aa16.9■□□□□ 0.3
YBX3-201ENST00000228251 OR51E1Q8TCB6 317 aa16.9■□□□□ 0.3
YBX3-201ENST00000228251 SEH1LQ96EE3 360 aa16.9■□□□□ 0.3
YBX3-201ENST00000228251 MED30Q96HR3 178 aa16.9■□□□□ 0.3
YBX3-201ENST00000228251 HYLS1Q96M11 299 aa16.9■□□□□ 0.3
YBX3-201ENST00000228251 SORCS2Q96PQ0 1159 aa16.9■□□□□ 0.3
YBX3-201ENST00000228251 UQCC2Q9BRT2 126 aa16.9■□□□□ 0.3
YBX3-201ENST00000228251 OR10A4Q9H209 315 aa16.9■□□□□ 0.3
YBX3-201ENST00000228251 METTL17Q9H7H0 456 aaPredicted RBP16.9■□□□□ 0.3
YBX3-201ENST00000228251 CNTD2Q9H8S5 307 aa16.9■□□□□ 0.3
YBX3-201ENST00000228251 NOX3Q9HBY0 568 aa16.9■□□□□ 0.3
YBX3-201ENST00000228251 TMEM138Q9NPI0 162 aa16.9■□□□□ 0.3
YBX3-201ENST00000228251 DEPPQ9NTK1 212 aa16.9■□□□□ 0.3
YBX3-201ENST00000228251 NKIRAS2Q9NYR9 191 aa16.9■□□□□ 0.3
YBX3-201ENST00000228251 FOXJ2Q9P0K8 574 aa16.9■□□□□ 0.3
YBX3-201ENST00000228251 FBLN5Q9UBX5 448 aa16.9■□□□□ 0.3
YBX3-201ENST00000228251 MRPS18CQ9Y3D5 142 aaKnown RBP16.9■□□□□ 0.3
YBX3-201ENST00000228251 TNFSF11O14788 317 aa16.89■□□□□ 0.3
YBX3-201ENST00000228251 ARPC1BO15143 372 aaKnown RBP16.89■□□□□ 0.3
YBX3-201ENST00000228251 IL5P05113 134 aa16.89■□□□□ 0.3
YBX3-201ENST00000228251 ANXA3P12429 323 aa16.89■□□□□ 0.3
YBX3-201ENST00000228251 MSR1P21757 451 aa16.89■□□□□ 0.3
YBX3-201ENST00000228251 PRKXP51817 358 aa16.89■□□□□ 0.3
YBX3-201ENST00000228251 RAC3P60763 192 aa16.89■□□□□ 0.3
YBX3-201ENST00000228251 Q6ZTK2 550 aa16.89■□□□□ 0.3
YBX3-201ENST00000228251 NAXDQ8IW45 347 aa16.89■□□□□ 0.3
YBX3-201ENST00000228251 PAQR4Q8N4S7 273 aaPredicted RBP16.89■□□□□ 0.3
YBX3-201ENST00000228251 ESX1Q8N693 406 aa16.89■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms