RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 SCRN3Q0VDG4 424 aa12.67□□□□□ -0.38
UPK3A-201ENST00000216211 CDK5R2Q13319 367 aa12.67□□□□□ -0.38
UPK3A-201ENST00000216211 BLMHQ13867 455 aa12.67□□□□□ -0.38
UPK3A-201ENST00000216211 C1orf94Q6P1W5 598 aa12.67□□□□□ -0.38
UPK3A-201ENST00000216211 Q6ZR03 302 aa12.67□□□□□ -0.38
UPK3A-201ENST00000216211 USP43Q70EL4 1123 aa12.67□□□□□ -0.38
UPK3A-201ENST00000216211 VASH1Q7L8A9 365 aaPredicted RBP12.67□□□□□ -0.38
UPK3A-201ENST00000216211 RRM2BQ7LG56 351 aa12.67□□□□□ -0.38
UPK3A-201ENST00000216211 ZER1Q7Z7L7 766 aa12.67□□□□□ -0.38
UPK3A-201ENST00000216211 NPEPL1Q8NDH3 523 aa12.67□□□□□ -0.38
UPK3A-201ENST00000216211 OR2Z1Q8NG97 314 aa12.67□□□□□ -0.38
UPK3A-201ENST00000216211 NANPQ8TBE9 248 aa12.67□□□□□ -0.38
UPK3A-201ENST00000216211 ST7LQ8TDW4 575 aa12.67□□□□□ -0.38
UPK3A-201ENST00000216211 SLC7A6Q92536 515 aa12.67□□□□□ -0.38
UPK3A-201ENST00000216211 RASD2Q96D21 266 aa12.67□□□□□ -0.38
UPK3A-201ENST00000216211 SLC6A7Q99884 636 aa12.67□□□□□ -0.38
UPK3A-201ENST00000216211 WACQ9BTA9 647 aa12.67□□□□□ -0.38
UPK3A-201ENST00000216211 RERGLQ9H628 205 aa12.67□□□□□ -0.38
UPK3A-201ENST00000216211 C7orf69Q9H7B7 122 aa12.67□□□□□ -0.38
UPK3A-201ENST00000216211 NMNAT1Q9HAN9 279 aaPredicted RBP12.67□□□□□ -0.38
UPK3A-201ENST00000216211 TBCCD1Q9NVR7 557 aa12.67□□□□□ -0.38
UPK3A-201ENST00000216211 PURGQ9UJV8 347 aaKnown RBP12.67□□□□□ -0.38
UPK3A-201ENST00000216211 STARD10Q9Y365 291 aa12.67□□□□□ -0.38
UPK3A-201ENST00000216211 SAMHD1Q9Y3Z3 626 aaKnown RBP12.67□□□□□ -0.38
UPK3A-201ENST00000216211 ENPP4Q9Y6X5 453 aa12.67□□□□□ -0.38
UPK3A-201ENST00000216211 PRSS37A4D1T9 235 aa12.66□□□□□ -0.38
UPK3A-201ENST00000216211 SLC16A7O60669 478 aa12.66□□□□□ -0.38
UPK3A-201ENST00000216211 DIRAS1O95057 198 aa12.66□□□□□ -0.38
UPK3A-201ENST00000216211 IGHV2-70P01814 119 aa12.66□□□□□ -0.38
UPK3A-201ENST00000216211 SBK2P0C263 348 aa12.66□□□□□ -0.38
UPK3A-201ENST00000216211 RHCEP18577 417 aa12.66□□□□□ -0.38
UPK3A-201ENST00000216211 MYF6P23409 242 aa12.66□□□□□ -0.38
UPK3A-201ENST00000216211 GATA3P23771 443 aa12.66□□□□□ -0.38
UPK3A-201ENST00000216211 ZFP36P26651 326 aaKnown RBP12.66□□□□□ -0.38
UPK3A-201ENST00000216211 HMGA2P52926 109 aa12.66□□□□□ -0.38
UPK3A-201ENST00000216211 KRR1Q13601 381 aaKnown RBP12.66□□□□□ -0.38
UPK3A-201ENST00000216211 RFX4Q33E94 735 aa12.66□□□□□ -0.38
UPK3A-201ENST00000216211 CYP4Z1Q86W10 505 aa12.66□□□□□ -0.38
UPK3A-201ENST00000216211 SLC7A13Q8TCU3 470 aa12.66□□□□□ -0.38
UPK3A-201ENST00000216211 FAM216AQ8WUB2 273 aa12.66□□□□□ -0.38
UPK3A-201ENST00000216211 CMBLQ96DG6 245 aa12.66□□□□□ -0.38
UPK3A-201ENST00000216211 CNBD2Q96M20 576 aa12.66□□□□□ -0.38
UPK3A-201ENST00000216211 SUCNR1Q9BXA5 334 aa12.66□□□□□ -0.38
UPK3A-201ENST00000216211 BATF3Q9NR55 127 aa12.66□□□□□ -0.38
UPK3A-201ENST00000216211 TMEM106BQ9NUM4 274 aa12.66□□□□□ -0.38
UPK3A-201ENST00000216211 PLEK2Q9NYT0 353 aa12.66□□□□□ -0.38
UPK3A-201ENST00000216211 IL20RAQ9UHF4 553 aa12.66□□□□□ -0.38
UPK3A-201ENST00000216211 OPN4Q9UHM6 478 aa12.66□□□□□ -0.38
UPK3A-201ENST00000216211 TMEM5Q9Y2B1 443 aa12.66□□□□□ -0.38
UPK3A-201ENST00000216211 COA3Q9Y2R0 106 aaPredicted RBP12.66□□□□□ -0.38
UPK3A-201ENST00000216211 AHCYL1O43865 530 aa12.65□□□□□ -0.38
UPK3A-201ENST00000216211 PTP4A3O75365 173 aa12.65□□□□□ -0.38
UPK3A-201ENST00000216211 NDUFB2O95178 105 aa12.65□□□□□ -0.38
UPK3A-201ENST00000216211 KITLGP21583 273 aa12.65□□□□□ -0.38
UPK3A-201ENST00000216211 TNFSF4P23510 183 aa12.65□□□□□ -0.38
UPK3A-201ENST00000216211 RRM2P31350 389 aa12.65□□□□□ -0.38
UPK3A-201ENST00000216211 AQP6Q13520 282 aa12.65□□□□□ -0.38
UPK3A-201ENST00000216211 CCDC92Q53HC0 331 aaPredicted RBP12.65□□□□□ -0.38
UPK3A-201ENST00000216211 HS3ST5Q8IZT8 346 aa12.65□□□□□ -0.38
UPK3A-201ENST00000216211 BPIFB2Q8N4F0 458 aa12.65□□□□□ -0.38
UPK3A-201ENST00000216211 OR4C15Q8NGM1 316 aa12.65□□□□□ -0.38
UPK3A-201ENST00000216211 ITLN1Q8WWA0 313 aa12.65□□□□□ -0.38
UPK3A-201ENST00000216211 C22orf15Q8WYQ4 148 aa12.65□□□□□ -0.38
UPK3A-201ENST00000216211 SAMD8Q96LT4 415 aa12.65□□□□□ -0.38
UPK3A-201ENST00000216211 JMJD8Q96S16 334 aa12.65□□□□□ -0.38
UPK3A-201ENST00000216211 PLA2G12AQ9BZM1 189 aa12.65□□□□□ -0.38
UPK3A-201ENST00000216211 NDEL1Q9GZM8 345 aa12.65□□□□□ -0.38
UPK3A-201ENST00000216211 SYT4Q9H2B2 425 aa12.65□□□□□ -0.38
UPK3A-201ENST00000216211 ANKRD19PQ9H560 264 aa12.65□□□□□ -0.38
UPK3A-201ENST00000216211 ESM1Q9NQ30 184 aa12.65□□□□□ -0.38
UPK3A-201ENST00000216211 ASH2LQ9UBL3 628 aa12.65□□□□□ -0.38
UPK3A-201ENST00000216211 SIGLEC7Q9Y286 467 aa12.65□□□□□ -0.38
UPK3A-201ENST00000216211 FAM32AQ9Y421 112 aaKnown RBP12.65□□□□□ -0.38
UPK3A-201ENST00000216211 LYVE1Q9Y5Y7 322 aa12.65□□□□□ -0.38
UPK3A-201ENST00000216211 U3KQV3 271 aa12.65□□□□□ -0.38
UPK3A-201ENST00000216211 TMEM89A2RUT3 159 aa12.64□□□□□ -0.39
UPK3A-201ENST00000216211 TNFRSF11BO00300 401 aa12.64□□□□□ -0.39
UPK3A-201ENST00000216211 KHDRBS3O75525 346 aaKnown RBP12.64□□□□□ -0.39
UPK3A-201ENST00000216211 FOXH1O75593 365 aa12.64□□□□□ -0.39
UPK3A-201ENST00000216211 FSHBP01225 129 aa12.64□□□□□ -0.39
UPK3A-201ENST00000216211 H1F0P07305 194 aaKnown RBP12.64□□□□□ -0.39
UPK3A-201ENST00000216211 TNFRSF1AP19438 455 aa12.64□□□□□ -0.39
UPK3A-201ENST00000216211 PRKACGP22612 351 aa12.64□□□□□ -0.39
UPK3A-201ENST00000216211 TUBG1P23258 451 aa12.64□□□□□ -0.39
UPK3A-201ENST00000216211 SDHAP31040 664 aa12.64□□□□□ -0.39
UPK3A-201ENST00000216211 OMPP47874 163 aa12.64□□□□□ -0.39
UPK3A-201ENST00000216211 LIMS1P48059 325 aa12.64□□□□□ -0.39
UPK3A-201ENST00000216211 COMPP49747 757 aaPredicted RBP12.64□□□□□ -0.39
UPK3A-201ENST00000216211 RAD23AP54725 363 aa12.64□□□□□ -0.39
UPK3A-201ENST00000216211 FXYD6P3P58550 94 aa12.64□□□□□ -0.39
UPK3A-201ENST00000216211 SEC61A1P61619 476 aaKnown RBP12.64□□□□□ -0.39
UPK3A-201ENST00000216211 PPP1R8Q12972 351 aaKnown RBP12.64□□□□□ -0.39
UPK3A-201ENST00000216211 FGD3Q5JSP0 725 aa12.64□□□□□ -0.39
UPK3A-201ENST00000216211 TTC23Q5W5X9 447 aa12.64□□□□□ -0.39
UPK3A-201ENST00000216211 KDM4DQ6B0I6 523 aa12.64□□□□□ -0.39
UPK3A-201ENST00000216211 FAHD1Q6P587 224 aa12.64□□□□□ -0.39
UPK3A-201ENST00000216211 PTCHD4Q6ZW05 846 aa12.64□□□□□ -0.39
UPK3A-201ENST00000216211 GLB1L2Q8IW92 636 aa12.64□□□□□ -0.39
UPK3A-201ENST00000216211 OR5AS1Q8N127 324 aa12.64□□□□□ -0.39
UPK3A-201ENST00000216211 ZNF283Q8N7M2 679 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms