RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 GTPBP8Q8N3Z3 284 aaPredicted RBP12.53□□□□□ -0.4
USH1C-201ENST00000005226 MITD1Q8WV92 249 aa12.53□□□□□ -0.4
USH1C-201ENST00000005226 AQP3Q92482 292 aa12.53□□□□□ -0.4
USH1C-201ENST00000005226 EDAQ92838 391 aa12.53□□□□□ -0.4
USH1C-201ENST00000005226 ADAT3Q96EY9 351 aaPredicted RBP12.53□□□□□ -0.4
USH1C-201ENST00000005226 CPNE2Q96FN4 548 aaPredicted RBP12.53□□□□□ -0.4
USH1C-201ENST00000005226 SOX7Q9BT81 388 aa12.53□□□□□ -0.4
USH1C-201ENST00000005226 TLNRD1Q9H1K6 362 aa12.53□□□□□ -0.4
USH1C-201ENST00000005226 DUSP15Q9H1R2 295 aaPredicted RBP12.53□□□□□ -0.4
USH1C-201ENST00000005226 CYP8B1Q9UNU6 501 aa12.53□□□□□ -0.4
USH1C-201ENST00000005226 PRELID3BQ9Y3B1 194 aa12.53□□□□□ -0.4
USH1C-201ENST00000005226 RHBDD3Q9Y3P4 386 aa12.53□□□□□ -0.4
USH1C-201ENST00000005226 MED12Q93074 2177 aa12.53□□□□□ -0.4
USH1C-201ENST00000005226 ASXL3Q9C0F0 2248 aa12.53□□□□□ -0.4
USH1C-201ENST00000005226 SPTY2D1-AS1A0A0U1RR47 76 aa12.53□□□□□ -0.4
USH1C-201ENST00000005226 DDAH2O95865 285 aa12.53□□□□□ -0.4
USH1C-201ENST00000005226 ZNF823P16415 610 aa12.53□□□□□ -0.4
USH1C-201ENST00000005226 ZNF345Q14585 488 aa12.53□□□□□ -0.4
USH1C-201ENST00000005226 HAGHLQ6PII5 290 aaPredicted RBP12.53□□□□□ -0.4
USH1C-201ENST00000005226 SHISA6Q6ZSJ9 500 aa12.53□□□□□ -0.4
USH1C-201ENST00000005226 COX15Q7KZN9 410 aa12.53□□□□□ -0.4
USH1C-201ENST00000005226 C9orf40Q8IXQ3 194 aa12.53□□□□□ -0.4
USH1C-201ENST00000005226 C7orf61Q8IZ16 206 aa12.53□□□□□ -0.4
USH1C-201ENST00000005226 ZNF721Q8TF20 911 aa12.53□□□□□ -0.4
USH1C-201ENST00000005226 SLC46A1Q96NT5 459 aa12.53□□□□□ -0.4
USH1C-201ENST00000005226 PHB2Q99623 299 aa12.53□□□□□ -0.4
USH1C-201ENST00000005226 MESP1Q9BRJ9 268 aa12.53□□□□□ -0.4
USH1C-201ENST00000005226 EMC6Q9BV81 110 aa12.53□□□□□ -0.4
USH1C-201ENST00000005226 OR5K4A6NMS3 321 aa12.52□□□□□ -0.41
USH1C-201ENST00000005226 ZNF217O75362 1048 aa12.52□□□□□ -0.41
USH1C-201ENST00000005226 ADAP1O75689 374 aa12.52□□□□□ -0.41
USH1C-201ENST00000005226 OPN1LWP04000 364 aa12.52□□□□□ -0.41
USH1C-201ENST00000005226 RABIFP47224 123 aa12.52□□□□□ -0.41
USH1C-201ENST00000005226 GLO1Q04760 184 aa12.52□□□□□ -0.41
USH1C-201ENST00000005226 SRSF4Q08170 494 aaKnown RBP12.52□□□□□ -0.41
USH1C-201ENST00000005226 SLC9A3R2Q15599 337 aa12.52□□□□□ -0.41
USH1C-201ENST00000005226 SHEQ5VZ18 495 aa12.52□□□□□ -0.41
USH1C-201ENST00000005226 ARMC10Q8N2F6 343 aa12.52□□□□□ -0.41
USH1C-201ENST00000005226 OR13C9Q8NGT0 318 aa12.52□□□□□ -0.41
USH1C-201ENST00000005226 FOXRED1Q96CU9 486 aaPredicted RBP12.52□□□□□ -0.41
USH1C-201ENST00000005226 ARL5BQ96KC2 179 aa12.52□□□□□ -0.41
USH1C-201ENST00000005226 PRRT1Q99946 306 aa12.52□□□□□ -0.41
USH1C-201ENST00000005226 PIGMQ9H3S5 423 aa12.52□□□□□ -0.41
USH1C-201ENST00000005226 MYOZ1Q9NP98 299 aaPredicted RBP12.52□□□□□ -0.41
USH1C-201ENST00000005226 VSX1Q9NZR4 365 aaPredicted RBP12.52□□□□□ -0.41
USH1C-201ENST00000005226 MLXQ9UH92 298 aa12.52□□□□□ -0.41
USH1C-201ENST00000005226 FAM96BQ9Y3D0 163 aa12.52□□□□□ -0.41
USH1C-201ENST00000005226 MSGN1A6NI15 193 aa12.52□□□□□ -0.41
USH1C-201ENST00000005226 SHISA8B8ZZ34 492 aa12.52□□□□□ -0.41
USH1C-201ENST00000005226 F8W036 122 aa12.52□□□□□ -0.41
USH1C-201ENST00000005226 H0YIZ8 118 aa12.52□□□□□ -0.41
USH1C-201ENST00000005226 H7C2Y5 167 aa12.52□□□□□ -0.41
USH1C-201ENST00000005226 SSX5O60225 188 aa12.52□□□□□ -0.41
USH1C-201ENST00000005226 DXOO77932 396 aaKnown RBP12.52□□□□□ -0.41
USH1C-201ENST00000005226 VSIG8P0DPA2 414 aa12.52□□□□□ -0.41
USH1C-201ENST00000005226 BLOC1S1P78537 153 aa12.52□□□□□ -0.41
USH1C-201ENST00000005226 DLX2Q07687 328 aaPredicted RBP12.52□□□□□ -0.41
USH1C-201ENST00000005226 PLCXD2Q0VAA5 305 aa12.52□□□□□ -0.41
USH1C-201ENST00000005226 C1orf100Q5SVJ3 147 aa12.52□□□□□ -0.41
USH1C-201ENST00000005226 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.52□□□□□ -0.41
USH1C-201ENST00000005226 RLN3Q8WXF3 142 aa12.52□□□□□ -0.41
USH1C-201ENST00000005226 TCTN2Q96GX1 697 aa12.52□□□□□ -0.41
USH1C-201ENST00000005226 RNF126Q9BV68 326 aa12.52□□□□□ -0.41
USH1C-201ENST00000005226 LRRC61Q9BV99 259 aa12.52□□□□□ -0.41
USH1C-201ENST00000005226 TMEM106CQ9BVX2 250 aa12.52□□□□□ -0.41
USH1C-201ENST00000005226 SLCO5A1Q9H2Y9 848 aa12.52□□□□□ -0.41
USH1C-201ENST00000005226 CHMP1AQ9HD42 196 aaPredicted RBP12.52□□□□□ -0.41
USH1C-201ENST00000005226 COL4A2P08572 1712 aa12.52□□□□□ -0.41
USH1C-201ENST00000005226 METTL21EPA6NDL7 271 aa12.51□□□□□ -0.41
USH1C-201ENST00000005226 HSPB2A8KAH6 182 aa12.51□□□□□ -0.41
USH1C-201ENST00000005226 ANOS1P23352 680 aa12.51□□□□□ -0.41
USH1C-201ENST00000005226 NFYBP25208 207 aa12.51□□□□□ -0.41
USH1C-201ENST00000005226 GABRA4P48169 554 aa12.51□□□□□ -0.41
USH1C-201ENST00000005226 NPY4RP50391 375 aa12.51□□□□□ -0.41
USH1C-201ENST00000005226 FLI1Q01543 452 aaPredicted RBP12.51□□□□□ -0.41
USH1C-201ENST00000005226 TOMM20Q15388 145 aa12.51□□□□□ -0.41
USH1C-201ENST00000005226 HSPB2Q16082 182 aa12.51□□□□□ -0.41
USH1C-201ENST00000005226 LYPD6Q86Y78 171 aa12.51□□□□□ -0.41
USH1C-201ENST00000005226 ST7LQ8TDW4 575 aa12.51□□□□□ -0.41
USH1C-201ENST00000005226 ASB13Q8WXK3 278 aa12.51□□□□□ -0.41
USH1C-201ENST00000005226 NUDT22Q9BRQ3 303 aa12.51□□□□□ -0.41
USH1C-201ENST00000005226 TREM1Q9NP99 234 aa12.51□□□□□ -0.41
USH1C-201ENST00000005226 OR2S2Q9NQN1 319 aa12.51□□□□□ -0.41
USH1C-201ENST00000005226 THADAQ6YHU6 1953 aa12.51□□□□□ -0.41
USH1C-201ENST00000005226 LRP4O75096 1905 aa12.51□□□□□ -0.41
USH1C-201ENST00000005226 A0A1W2PP11 408 aa12.51□□□□□ -0.41
USH1C-201ENST00000005226 FRG2CA6NGY1 282 aa12.51□□□□□ -0.41
USH1C-201ENST00000005226 TMEM200CA6NKL6 621 aa12.51□□□□□ -0.41
USH1C-201ENST00000005226 OR2T1O43869 369 aa12.51□□□□□ -0.41
USH1C-201ENST00000005226 IFNA6P05013 189 aa12.51□□□□□ -0.41
USH1C-201ENST00000005226 H2BFMP0C1H6 154 aa12.51□□□□□ -0.41
USH1C-201ENST00000005226 SLC2A1P11166 492 aa12.51□□□□□ -0.41
USH1C-201ENST00000005226 FSTP19883 344 aa12.51□□□□□ -0.41
USH1C-201ENST00000005226 PGCP20142 388 aa12.51□□□□□ -0.41
USH1C-201ENST00000005226 PSMB6P28072 239 aa12.51□□□□□ -0.41
USH1C-201ENST00000005226 SLC6A8P48029 635 aa12.51□□□□□ -0.41
USH1C-201ENST00000005226 NPBWR1P48145 328 aa12.51□□□□□ -0.41
USH1C-201ENST00000005226 MEF2DQ14814 521 aa12.51□□□□□ -0.41
USH1C-201ENST00000005226 LPCAT3Q6P1A2 487 aa12.51□□□□□ -0.41
USH1C-201ENST00000005226 ZFP82Q8N141 532 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms