RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Gdf7P43029 461 aa12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Nrsn2Q5HZK2 202 aa12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Btn1a1Q62556 524 aa12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Lrrc75aQ7TSF4 339 aa12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Cpeb2Q812E0 521 aaKnown RBP12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Znf775Q8BI73 538 aa12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Ndrg4Q8BTG7 352 aaKnown RBP12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Rfc3Q8R323 356 aaKnown RBP12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Olfr1132Q8VG97 308 aa12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Spns3Q9D232 514 aa12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Ndufb10Q9DCS9 176 aa12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Isyna1Q9JHU9 557 aa12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Hapln1Q9QUP5 356 aaKnown RBP12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Gm17087V9GXQ2 156 aa12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Vmn1r122K7N726 305 aa12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 P04213 122 aa12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Dlx2P40764 332 aa12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Hmx2P43687 273 aa12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Olfr1386Q7TQT0 309 aa12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Olfr201Q7TS38 308 aa12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Pop4Q9CR08 221 aa12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Toe1Q9D2E2 511 aa12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Sorcs2Q9EPR5 1159 aa12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Exo1Q9QZ11 837 aa12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Fzd9Q9R216 592 aa12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Myh8P13542 1937 aa12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Lrrc3cA0A1B0GRI5 255 aa12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Rdh16f1E9Q9P8 317 aa12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Gm4141K9J7H2 306 aa12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Olfr597L7N224 315 aa12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Mllt10O54826 1068 aa12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 ThbdP15306 577 aa12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Thbs1P35441 1170 aa12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Havcr1Q5QNS5 305 aa12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Clec7aQ6QLQ4 244 aa12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Mfsd11Q8BJ51 449 aa12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Mblac1Q8BWY4 260 aa12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Dcbld2Q91ZV3 769 aa12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Exosc8Q9D753 276 aaKnown RBP12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Znf593Q9DB42 134 aaKnown RBP12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 NpvfQ9ESQ8 188 aa12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Srd5a3Q9WUP4 330 aa12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Tnfrsf14A0A1W2P7D5 276 aa12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Olfr872E9PVW2 323 aa12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Gm10715J3QP74 227 aa12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Icam5Q60625 917 aa12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 AstlQ6HA09 435 aa12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Zfp663Q6NXM6 656 aa12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Prl8a1Q9DAV8 240 aa12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Gstk1Q9DCM2 226 aa12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 PbkQ9JJ78 330 aa12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 SrpxQ9R0M3 464 aa12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Wif1Q9WUA1 379 aa12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Bcl9lQ67FY2 1494 aa12.87□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Olfr65A0A1B0GSF4 315 aa12.86□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Esp36G3UZD8 160 aa12.86□□□□□ -0.35
Col3a1-201ENSMUST00000087883 P01851 173 aa12.86□□□□□ -0.35
Col3a1-201ENSMUST00000087883 P01852 173 aa12.86□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Tacr3P47937 452 aa12.86□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Cnep1r1Q3UJ81 125 aa12.86□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Q3V0E1 1183 aa12.86□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Olfr1166Q7TR27 316 aa12.86□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Bcas1Q80YN3 633 aa12.86□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Zfp799Q8BHK4 648 aa12.86□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Reep4Q8K072 257 aa12.86□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Gabarapl1Q8R3R8 117 aa12.86□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Olfr646Q8VGW2 312 aa12.86□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Nt5dc2Q91X76 390 aaKnown RBP12.86□□□□□ -0.35
Col3a1-201ENSMUST00000087883 NcmapQ99JS0 100 aa12.86□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Tppp3Q9CRB6 176 aaKnown RBP12.86□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Supt7lQ9CZV5 412 aa12.86□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Prss1Q9Z1R9 246 aa12.86□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Yjefn3F6W8I0 251 aa12.86□□□□□ -0.35
Col3a1-201ENSMUST00000087883 RrhO35214 337 aa12.86□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Cd9P40240 226 aa12.86□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Bmp5P49003 452 aa12.86□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Gabrb1P50571 474 aa12.86□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Cass4Q08EC4 804 aa12.86□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Samt2Q497M0 247 aa12.86□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Scarb1Q61009 509 aa12.86□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Paqr9Q6TCG2 375 aa12.86□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Tnfsfm13Q8BXS2 410 aa12.86□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Defb36Q8K3U4 67 aa12.86□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Rab27bQ99P58 218 aa12.86□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Dnajc4Q9D844 244 aa12.86□□□□□ -0.35
Col3a1-201ENSMUST00000087883 SpdefQ9WTP3 325 aa12.86□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Myh4Q5SX39 1939 aa12.86□□□□□ -0.35
Col3a1-201ENSMUST00000087883 RrasP10833 218 aa12.86□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Slc11a1P41251 548 aa12.86□□□□□ -0.35
Col3a1-201ENSMUST00000087883 RorcP51450 516 aa12.86□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Rhox4gQ2MDF7 205 aa12.86□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Rhox4dQ2MDG0 205 aa12.86□□□□□ -0.35
Col3a1-201ENSMUST00000087883 TfptQ3U1J1 259 aa12.86□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Rhox4eQ504P9 205 aa12.86□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Rnase11Q5GAM9 192 aa12.86□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Ip6k1Q6PD10 433 aa12.86□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Q8BHR8 331 aa12.86□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Yipf6Q8BR70 236 aa12.86□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Rwdd3Q8VIL2 267 aa12.86□□□□□ -0.35
Col3a1-201ENSMUST00000087883 Flvcr2Q91X85 551 aa12.86□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 49.5 ms