RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Gm13083A2AGW5 501 aa8.09□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Olfr310B2RVZ1 332 aa8.09□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Olfr655E9Q252 308 aa8.09□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Olfr631F8VPJ9 319 aa8.09□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Slc38a6G3UVW3 457 aa8.09□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Isoc2aP85094 206 aa8.09□□□□□ -1.11
Upf3b-201ENSMUST00000076265 McidasQ3UZ45 379 aa8.09□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Zbtb8osQ505B7 168 aa8.09□□□□□ -1.11
Upf3b-201ENSMUST00000076265 SnrpcQ62241 159 aa8.09□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Btn1a1Q62556 524 aa8.09□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Hmgb4Q6P8W9 181 aa8.09□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Olfr667Q7TRP4 326 aa8.09□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Larp4Q8BWW4 719 aaKnown RBP8.09□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Rdh10Q8VCH7 341 aa8.09□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Olfr52Q8VFL0 319 aa8.09□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Lpin3Q99PI4 848 aa8.09□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Tspan31Q9CQ88 210 aa8.09□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Wbp2nlQ9D529 359 aa8.09□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Myh8P13542 1937 aa8.09□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Gm28539A0A087WSL9 92 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Olfr1247A2AT78 314 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Olfr1303A2AVW1 312 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Fam240bJ3QMB3 78 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Vmn2r89O35199 507 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 C4bpaP08607 469 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Neurl1bQ0MW30 546 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Ldlrad2Q3V0V0 142 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Sdr39u1Q5M8N4 308 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Sco1Q5SUC9 284 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Mbtd1Q6P5G3 631 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Acot5Q6Q2Z6 421 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 RfflQ6ZQM0 377 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Gpr142Q7TQN9 365 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Olfr399Q7TRX3 311 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Efcab3Q80X60 432 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Slc16a12Q8BGC3 486 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Tdp1Q8BJ37 609 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Olfr330Q8VGD9 315 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 KmoQ91WN4 479 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Srd5a2Q99N99 254 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 GhsrQ99P50 364 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Dnajc19Q9CQV7 116 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Cyb5bQ9CQX2 146 aaKnown RBP8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Mansc1Q9CR33 414 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 BambiQ9D0L6 260 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Exosc7Q9D0M0 291 aaKnown RBP8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Dtwd2Q9D0U1 298 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 SlirpQ9D8T7 112 aaKnown RBP8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Olfr705Q9EPF7 316 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Bloc1s6Q9R0C0 172 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Nme4Q9WV84 186 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Sbf2E9PXF8 1872 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Olfr228A0A1L1SR98 313 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Trmt1lA2RSY6 728 aaKnown RBP8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Olfr608E9Q564 316 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Ifnb1P01575 182 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Mboat4P0C7A3 435 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Olfr15P23275 312 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Kcne1P23299 129 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Rab6aP35279 208 aaKnown RBP8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Zic1P46684 447 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Rpl5P47962 297 aaKnown RBP8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Impdh1P50096 514 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Rps6P62754 249 aaKnown RBP8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 KhsrpQ3U0V1 748 aaKnown RBP8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Olfr322Q5NCC8 327 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Tnfrsf8Q60846 498 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Tusc1Q673H1 205 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 AstlQ6HA09 435 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Q80VP5 184 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Grhl2Q8K5C0 625 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Slc16a4Q8R0M8 500 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Il34Q8R1R4 235 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Vmn1r228Q8R2A7 333 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Thap7Q8VCZ3 309 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Olfr1391Q8VFA4 311 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Olfr1467Q8VFW1 308 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Olfr1054Q8VGS7 312 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Wdr45Q91VM3 360 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 CbsQ91WT9 561 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Slamf9Q9D780 285 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Fam45aQ9D8N2 357 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Vmn1r63Q9EPT1 300 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Zdhhc16Q9ESG8 361 aa8.08□□□□□ -1.12
Upf3b-201ENSMUST00000076265 A0A286YCQ6 122 aa8.07□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Gm5089A1L3C8 106 aa8.07□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Olfr568E9Q554 313 aa8.07□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Spdye4cI6XKQ3 339 aa8.07□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Phb2O35129 299 aaKnown RBP8.07□□□□□ -1.12
Upf3b-201ENSMUST00000076265 P06335 190 aa8.07□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Prl3b1P09586 222 aa8.07□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Efnb2P52800 336 aa8.07□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Rap1aP62835 184 aa8.07□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Ikzf2P81183 526 aa8.07□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Fthl17dQ3SXD1 176 aa8.07□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Cln6Q3U466 308 aa8.07□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Slc7a15Q50E62 488 aa8.07□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Sap30lQ5SQF8 182 aa8.07□□□□□ -1.12
Upf3b-201ENSMUST00000076265 2700097O09RikQ6PGK3 301 aa8.07□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Gpr173Q6PI62 373 aa8.07□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 28.7 ms