RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 COPS3Q9UNS2 423 aa15.19■□□□□ 0.02
PHGDH-234ENST00000642041 FBN1P35555 2871 aaKnown RBP15.19■□□□□ 0.02
PHGDH-234ENST00000642041 IGKV3D-15A0A087WSY6 115 aa15.18■□□□□ 0.02
PHGDH-234ENST00000642041 TVP23AA6NH52 213 aa15.18■□□□□ 0.02
PHGDH-234ENST00000642041 ZNF724A8MTY0 619 aa15.18■□□□□ 0.02
PHGDH-234ENST00000642041 TNFSF11O14788 317 aa15.18■□□□□ 0.02
PHGDH-234ENST00000642041 UPK3AO75631 287 aa15.18■□□□□ 0.02
PHGDH-234ENST00000642041 UCHL1P09936 223 aa15.18■□□□□ 0.02
PHGDH-234ENST00000642041 FCGR2AP12318 317 aa15.18■□□□□ 0.02
PHGDH-234ENST00000642041 CPN1P15169 458 aa15.18■□□□□ 0.02
PHGDH-234ENST00000642041 MMP16P51512 607 aa15.18■□□□□ 0.02
PHGDH-234ENST00000642041 GRB2P62993 217 aaKnown RBP15.18■□□□□ 0.02
PHGDH-234ENST00000642041 MEP1BQ16820 701 aa15.18■□□□□ 0.02
PHGDH-234ENST00000642041 ZNF181Q2M3W8 571 aa15.18■□□□□ 0.02
PHGDH-234ENST00000642041 HSD17B12Q53GQ0 312 aa15.18■□□□□ 0.02
PHGDH-234ENST00000642041 ABLIM2Q6H8Q1 611 aa15.18■□□□□ 0.02
PHGDH-234ENST00000642041 TMEM91Q6ZNR0 172 aa15.18■□□□□ 0.02
PHGDH-234ENST00000642041 SSX6Q7RTT6 188 aa15.18■□□□□ 0.02
PHGDH-234ENST00000642041 GGNQ86UU5 652 aa15.18■□□□□ 0.02
PHGDH-234ENST00000642041 SYT14Q8NB59 555 aa15.18■□□□□ 0.02
PHGDH-234ENST00000642041 GJC3Q8NFK1 279 aa15.18■□□□□ 0.02
PHGDH-234ENST00000642041 OR10D3Q8NH80 312 aa15.18■□□□□ 0.02
PHGDH-234ENST00000642041 ZNRF4Q8WWF5 429 aa15.18■□□□□ 0.02
PHGDH-234ENST00000642041 ABHD6Q9BV23 337 aa15.18■□□□□ 0.02
PHGDH-234ENST00000642041 NELFAQ9H3P2 528 aa15.18■□□□□ 0.02
PHGDH-234ENST00000642041 ELOVL3Q9HB03 270 aa15.18■□□□□ 0.02
PHGDH-234ENST00000642041 ACOXLQ9NUZ1 547 aa15.18■□□□□ 0.02
PHGDH-234ENST00000642041 MRPL22Q9NWU5 206 aaKnown RBP15.18■□□□□ 0.02
PHGDH-234ENST00000642041 CYB5R1Q9UHQ9 305 aa15.18■□□□□ 0.02
PHGDH-234ENST00000642041 CMAHPQ9Y471 501 aa15.18■□□□□ 0.02
PHGDH-234ENST00000642041 HRH3Q9Y5N1 445 aa15.18■□□□□ 0.02
PHGDH-234ENST00000642041 MEGF11A6BM72 1044 aa15.17■□□□□ 0.02
PHGDH-234ENST00000642041 VGLL3A8MV65 326 aa15.17■□□□□ 0.02
PHGDH-234ENST00000642041 FAM171A2A8MVW0 826 aa15.17■□□□□ 0.02
PHGDH-234ENST00000642041 WISP2O76076 250 aa15.17■□□□□ 0.02
PHGDH-234ENST00000642041 TPPPO94811 219 aa15.17■□□□□ 0.02
PHGDH-234ENST00000642041 ABHD16AO95870 558 aa15.17■□□□□ 0.02
PHGDH-234ENST00000642041 ISG15P05161 165 aa15.17■□□□□ 0.02
PHGDH-234ENST00000642041 QDPRP09417 244 aa15.17■□□□□ 0.02
PHGDH-234ENST00000642041 H2BFMP0C1H6 154 aa15.17■□□□□ 0.02
PHGDH-234ENST00000642041 CD8BP10966 210 aa15.17■□□□□ 0.02
PHGDH-234ENST00000642041 ZNF708P17019 499 aa15.17■□□□□ 0.02
PHGDH-234ENST00000642041 RAB3BP20337 219 aa15.17■□□□□ 0.02
PHGDH-234ENST00000642041 MSR1P21757 451 aa15.17■□□□□ 0.02
PHGDH-234ENST00000642041 OPRL1P41146 370 aa15.17■□□□□ 0.02
PHGDH-234ENST00000642041 EIF1AXP47813 144 aaKnown RBP15.17■□□□□ 0.02
PHGDH-234ENST00000642041 ECH1Q13011 328 aa15.17■□□□□ 0.02
PHGDH-234ENST00000642041 Q71RC1 249 aaPredicted RBP15.17■□□□□ 0.02
PHGDH-234ENST00000642041 FCRLAQ7L513 359 aa15.17■□□□□ 0.02
PHGDH-234ENST00000642041 ABHD12BQ7Z5M8 362 aaPredicted RBP15.17■□□□□ 0.02
PHGDH-234ENST00000642041 DPPA2Q7Z7J5 298 aa15.17■□□□□ 0.02
PHGDH-234ENST00000642041 C20orf196Q8IYI0 205 aa15.17■□□□□ 0.02
PHGDH-234ENST00000642041 GHDCQ8N2G8 530 aa15.17■□□□□ 0.02
PHGDH-234ENST00000642041 TMEM251Q8N6I4 163 aa15.17■□□□□ 0.02
PHGDH-234ENST00000642041 ZNF676Q8N7Q3 588 aa15.17■□□□□ 0.02
PHGDH-234ENST00000642041 OR2G2Q8NGZ5 317 aa15.17■□□□□ 0.02
PHGDH-234ENST00000642041 C15orf40Q8WUR7 153 aa15.17■□□□□ 0.02
PHGDH-234ENST00000642041 RNF133Q8WVZ7 376 aa15.17■□□□□ 0.02
PHGDH-234ENST00000642041 SH3GL3Q99963 347 aa15.17■□□□□ 0.02
PHGDH-234ENST00000642041 SLC30A2Q9BRI3 323 aa15.17■□□□□ 0.02
PHGDH-234ENST00000642041 HES7Q9BYE0 225 aa15.17■□□□□ 0.02
PHGDH-234ENST00000642041 LINC00470Q9BZP3 86 aa15.17■□□□□ 0.02
PHGDH-234ENST00000642041 ZCCHC4Q9H5U6 513 aa15.17■□□□□ 0.02
PHGDH-234ENST00000642041 SMURF1Q9HCE7 757 aa15.17■□□□□ 0.02
PHGDH-234ENST00000642041 POLR1DQ9Y2S0 133 aa15.17■□□□□ 0.02
PHGDH-234ENST00000642041 R4GMQ9 66 aa15.17■□□□□ 0.02
PHGDH-234ENST00000642041 NOTOA8MTQ0 251 aa15.16■□□□□ 0.02
PHGDH-234ENST00000642041 ZNF878C9JN71 531 aa15.16■□□□□ 0.02
PHGDH-234ENST00000642041 SMAD9O15198 467 aaKnown RBP15.16■□□□□ 0.02
PHGDH-234ENST00000642041 DHHO43323 396 aa15.16■□□□□ 0.02
PHGDH-234ENST00000642041 RFPL3SP0C7P2 107 aa15.16■□□□□ 0.02
PHGDH-234ENST00000642041 UBCP0CG48 685 aaKnown RBP15.16■□□□□ 0.02
PHGDH-234ENST00000642041 CTSSP25774 331 aa15.16■□□□□ 0.02
PHGDH-234ENST00000642041 CALRP27797 417 aaKnown RBP15.16■□□□□ 0.02
PHGDH-234ENST00000642041 SHC1P29353 583 aa15.16■□□□□ 0.02
PHGDH-234ENST00000642041 CD79BP40259 229 aa15.16■□□□□ 0.02
PHGDH-234ENST00000642041 PCBD1P61457 104 aa15.16■□□□□ 0.02
PHGDH-234ENST00000642041 MRPS34P82930 218 aaKnown RBP15.16■□□□□ 0.02
PHGDH-234ENST00000642041 HNRNPA0Q13151 305 aaKnown RBP15.16■□□□□ 0.02
PHGDH-234ENST00000642041 CAMK2DQ13557 499 aa15.16■□□□□ 0.02
PHGDH-234ENST00000642041 LRRN1Q6UXK5 716 aa15.16■□□□□ 0.02
PHGDH-234ENST00000642041 NCCRP1Q6ZVX7 275 aaPredicted RBP15.16■□□□□ 0.02
PHGDH-234ENST00000642041 AAED1Q7RTV5 226 aa15.16■□□□□ 0.02
PHGDH-234ENST00000642041 GPR137CQ8N3F9 429 aa15.16■□□□□ 0.02
PHGDH-234ENST00000642041 ZFP41Q8N8Y5 198 aa15.16■□□□□ 0.02
PHGDH-234ENST00000642041 OR2M2Q96R28 347 aa15.16■□□□□ 0.02
PHGDH-234ENST00000642041 LDAHQ9H6V9 325 aa15.16■□□□□ 0.02
PHGDH-234ENST00000642041 TCF7L1Q9HCS4 588 aa15.16■□□□□ 0.02
PHGDH-234ENST00000642041 ZNF175Q9Y473 711 aa15.16■□□□□ 0.02
PHGDH-234ENST00000642041 FLVCR1Q9Y5Y0 555 aa15.16■□□□□ 0.02
PHGDH-234ENST00000642041 PMF1-BGLAPU3KQ54 211 aa15.16■□□□□ 0.02
PHGDH-234ENST00000642041 TRGV5A0A0B4J1U4 118 aa15.15■□□□□ 0.02
PHGDH-234ENST00000642041 E9PI62 339 aa15.15■□□□□ 0.02
PHGDH-234ENST00000642041 RGS5O15539 181 aa15.15■□□□□ 0.02
PHGDH-234ENST00000642041 CXCL13O43927 109 aa15.15■□□□□ 0.02
PHGDH-234ENST00000642041 OR8G3PP0DMU2 310 aa15.15■□□□□ 0.02
PHGDH-234ENST00000642041 SRMP19623 302 aa15.15■□□□□ 0.02
PHGDH-234ENST00000642041 APEX1P27695 318 aaKnown RBP15.15■□□□□ 0.02
PHGDH-234ENST00000642041 TALDO1P37837 337 aa15.15■□□□□ 0.02
PHGDH-234ENST00000642041 LHX2P50458 406 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms