RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	LILRA1	O75019	489 aa		12.81	□□□□□ -0.36
PHGDH-231	ENST00000641939	FKBP6	O75344	327 aa		12.81	□□□□□ -0.36
PHGDH-231	ENST00000641939	E2F6	O75461	281 aa		12.81	□□□□□ -0.36
PHGDH-231	ENST00000641939	ATP5H	O75947	161 aa		12.81	□□□□□ -0.36
PHGDH-231	ENST00000641939	DBH	P09172	617 aa		12.81	□□□□□ -0.36
PHGDH-231	ENST00000641939	ZNF823	P16415	610 aa		12.81	□□□□□ -0.36
PHGDH-231	ENST00000641939	ZNF16	P17020	682 aa	Predicted RBP	12.81	□□□□□ -0.36
PHGDH-231	ENST00000641939	PYCR1	P32322	319 aa		12.81	□□□□□ -0.36
PHGDH-231	ENST00000641939	GGT2	P36268	569 aa		12.81	□□□□□ -0.36
PHGDH-231	ENST00000641939	GPR6	P46095	362 aa	Predicted RBP	12.81	□□□□□ -0.36
PHGDH-231	ENST00000641939	RGS6	P49758	472 aa		12.81	□□□□□ -0.36
PHGDH-231	ENST00000641939	TMEM33	P57088	247 aa		12.81	□□□□□ -0.36
PHGDH-231	ENST00000641939	CBX1	P83916	185 aa		12.81	□□□□□ -0.36
PHGDH-231	ENST00000641939	PSG7	Q13046	419 aa		12.81	□□□□□ -0.36
PHGDH-231	ENST00000641939	TST	Q16762	297 aa	Known RBP	12.81	□□□□□ -0.36
PHGDH-231	ENST00000641939	FAM209A	Q5JX71	171 aa		12.81	□□□□□ -0.36
PHGDH-231	ENST00000641939	SLC18B1	Q6NT16	456 aa		12.81	□□□□□ -0.36
PHGDH-231	ENST00000641939	SLC37A3	Q8NCC5	494 aa		12.81	□□□□□ -0.36
PHGDH-231	ENST00000641939	PAPD5	Q8NDF8	572 aa	Known RBP	12.81	□□□□□ -0.36
PHGDH-231	ENST00000641939	OR2AJ1	Q8NGZ0	328 aa		12.81	□□□□□ -0.36
PHGDH-231	ENST00000641939	TEX47	Q8TBZ9	253 aa		12.81	□□□□□ -0.36
PHGDH-231	ENST00000641939	RBM4	Q9BWF3	364 aa	Known RBP	12.81	□□□□□ -0.36
PHGDH-231	ENST00000641939	ZNF275	Q9NSD4	429 aa	Predicted RBP	12.81	□□□□□ -0.36
PHGDH-231	ENST00000641939	MRPL22	Q9NWU5	206 aa	Known RBP	12.81	□□□□□ -0.36
PHGDH-231	ENST00000641939	PDP1	Q9P0J1	537 aa	Predicted RBP	12.81	□□□□□ -0.36
PHGDH-231	ENST00000641939	KCNG2	Q9UJ96	466 aa		12.81	□□□□□ -0.36
PHGDH-231	ENST00000641939	STARD10	Q9Y365	291 aa		12.81	□□□□□ -0.36
PHGDH-231	ENST00000641939	ATR	Q13535	2644 aa		12.8	□□□□□ -0.36
PHGDH-231	ENST00000641939	ZSCAN5B	A6NJL1	495 aa		12.8	□□□□□ -0.36
PHGDH-231	ENST00000641939		H3BN98	237 aa		12.8	□□□□□ -0.36
PHGDH-231	ENST00000641939		J3QW42	95 aa		12.8	□□□□□ -0.36
PHGDH-231	ENST00000641939	TPD52L2	O43399	206 aa	Known RBP	12.8	□□□□□ -0.36
PHGDH-231	ENST00000641939	SPRY3	O43610	288 aa		12.8	□□□□□ -0.36
PHGDH-231	ENST00000641939	TIMM8A	O60220	97 aa	Predicted RBP	12.8	□□□□□ -0.36
PHGDH-231	ENST00000641939	RP2	O75695	350 aa		12.8	□□□□□ -0.36
PHGDH-231	ENST00000641939	IFNG	P01579	166 aa		12.8	□□□□□ -0.36
PHGDH-231	ENST00000641939	IGHV1-46	P01743	117 aa		12.8	□□□□□ -0.36
PHGDH-231	ENST00000641939	CRMP1	Q14194	572 aa		12.8	□□□□□ -0.36
PHGDH-231	ENST00000641939	TRIP10	Q15642	601 aa		12.8	□□□□□ -0.36
PHGDH-231	ENST00000641939	ZMAT1	Q5H9K5	638 aa		12.8	□□□□□ -0.36
PHGDH-231	ENST00000641939	CFAP77	Q6ZQR2	320 aa		12.8	□□□□□ -0.36
PHGDH-231	ENST00000641939	HPS1	Q92902	700 aa		12.8	□□□□□ -0.36
PHGDH-231	ENST00000641939	APOBEC3D	Q96AK3	386 aa	Predicted RBP	12.8	□□□□□ -0.36
PHGDH-231	ENST00000641939	SLCO4A1	Q96BD0	722 aa		12.8	□□□□□ -0.36
PHGDH-231	ENST00000641939	CMBL	Q96DG6	245 aa		12.8	□□□□□ -0.36
PHGDH-231	ENST00000641939	MSI2	Q96DH6	328 aa	Known RBP	12.8	□□□□□ -0.36
PHGDH-231	ENST00000641939	PITX2	Q99697	317 aa		12.8	□□□□□ -0.36
PHGDH-231	ENST00000641939	NMNAT2	Q9BZQ4	307 aa		12.8	□□□□□ -0.36
PHGDH-231	ENST00000641939	SAP30L	Q9HAJ7	183 aa		12.8	□□□□□ -0.36
PHGDH-231	ENST00000641939	DNAJB9	Q9UBS3	223 aa		12.8	□□□□□ -0.36
PHGDH-231	ENST00000641939	CUBN	O60494	3623 aa		12.8	□□□□□ -0.36
PHGDH-231	ENST00000641939	DYSF	O75923	2080 aa		12.79	□□□□□ -0.36
PHGDH-231	ENST00000641939	IGHV1-69-2	A0A0G2JMI3	117 aa		12.79	□□□□□ -0.36
PHGDH-231	ENST00000641939	LOC100289279	A0A1B0GTE1	492 aa		12.79	□□□□□ -0.36
PHGDH-231	ENST00000641939	RIIAD1	A6NNX1	92 aa		12.79	□□□□□ -0.36
PHGDH-231	ENST00000641939	PPIH	O43447	177 aa	Known RBP	12.79	□□□□□ -0.36
PHGDH-231	ENST00000641939	CDC14B	O60729	498 aa		12.79	□□□□□ -0.36
PHGDH-231	ENST00000641939	ADH4	P08319	380 aa		12.79	□□□□□ -0.36
PHGDH-231	ENST00000641939	ZNF3	P17036	446 aa		12.79	□□□□□ -0.36
PHGDH-231	ENST00000641939	KITLG	P21583	273 aa		12.79	□□□□□ -0.36
PHGDH-231	ENST00000641939	CRYBB2	P43320	205 aa		12.79	□□□□□ -0.36
PHGDH-231	ENST00000641939	ERF	P50548	548 aa		12.79	□□□□□ -0.36
PHGDH-231	ENST00000641939	SLC25A1	P53007	311 aa		12.79	□□□□□ -0.36
PHGDH-231	ENST00000641939	ECH1	Q13011	328 aa		12.79	□□□□□ -0.36
PHGDH-231	ENST00000641939	RSPO1	Q2MKA7	263 aa	Predicted RBP	12.79	□□□□□ -0.36
PHGDH-231	ENST00000641939	KRTAP27-1	Q3LI81	207 aa		12.79	□□□□□ -0.36
PHGDH-231	ENST00000641939	FAM166A	Q6J272	317 aa		12.79	□□□□□ -0.36
PHGDH-231	ENST00000641939	USP51	Q70EK9	711 aa		12.79	□□□□□ -0.36
PHGDH-231	ENST00000641939	HIPK1	Q86Z02	1210 aa		12.79	□□□□□ -0.36
PHGDH-231	ENST00000641939	HS3ST5	Q8IZT8	346 aa		12.79	□□□□□ -0.36
PHGDH-231	ENST00000641939	OR51L1	Q8NGJ5	315 aa		12.79	□□□□□ -0.36
PHGDH-231	ENST00000641939	OR5L1	Q8NGL2	311 aa		12.79	□□□□□ -0.36
PHGDH-231	ENST00000641939	OR9Q1	Q8NGQ5	310 aa		12.79	□□□□□ -0.36
PHGDH-231	ENST00000641939	ZNRF4	Q8WWF5	429 aa		12.79	□□□□□ -0.36
PHGDH-231	ENST00000641939	PTP4A1	Q93096	173 aa		12.79	□□□□□ -0.36
PHGDH-231	ENST00000641939	DIRC2	Q96SL1	478 aa		12.79	□□□□□ -0.36
PHGDH-231	ENST00000641939	ATF6B	Q99941	703 aa		12.79	□□□□□ -0.36
PHGDH-231	ENST00000641939	EGLN1	Q9GZT9	426 aa		12.79	□□□□□ -0.36
PHGDH-231	ENST00000641939	ZNF556	Q9HAH1	456 aa		12.79	□□□□□ -0.36
PHGDH-231	ENST00000641939	MSL2	Q9HCI7	577 aa		12.79	□□□□□ -0.36
PHGDH-231	ENST00000641939	CMC2	Q9NRP2	79 aa		12.79	□□□□□ -0.36
PHGDH-231	ENST00000641939	TMEM160	Q9NX00	188 aa		12.79	□□□□□ -0.36
PHGDH-231	ENST00000641939	PURG	Q9UJV8	347 aa	Known RBP	12.79	□□□□□ -0.36
PHGDH-231	ENST00000641939	ZDHHC8	Q9ULC8	765 aa		12.79	□□□□□ -0.36
PHGDH-231	ENST00000641939	WNK2	Q9Y3S1	2297 aa		12.78	□□□□□ -0.36
PHGDH-231	ENST00000641939	TVP23A	A6NH52	213 aa		12.78	□□□□□ -0.36
PHGDH-231	ENST00000641939	LMX1B	O60663	402 aa		12.78	□□□□□ -0.36
PHGDH-231	ENST00000641939	GYPB	P06028	91 aa		12.78	□□□□□ -0.36
PHGDH-231	ENST00000641939	RAC2	P15153	192 aa		12.78	□□□□□ -0.36
PHGDH-231	ENST00000641939	SPI1	P17947	270 aa		12.78	□□□□□ -0.36
PHGDH-231	ENST00000641939	POU1F1	P28069	291 aa		12.78	□□□□□ -0.36
PHGDH-231	ENST00000641939	FMO3	P31513	532 aa		12.78	□□□□□ -0.36
PHGDH-231	ENST00000641939	IL2RG	P31785	369 aa		12.78	□□□□□ -0.36
PHGDH-231	ENST00000641939	GRK5	P34947	590 aa		12.78	□□□□□ -0.36
PHGDH-231	ENST00000641939	LYPD4	Q6UWN0	246 aa		12.78	□□□□□ -0.36
PHGDH-231	ENST00000641939	IQCF1	Q8N6M8	205 aa		12.78	□□□□□ -0.36
PHGDH-231	ENST00000641939	HAVCR1	Q96D42	359 aa		12.78	□□□□□ -0.36
PHGDH-231	ENST00000641939	ELMOD3	Q96FG2	381 aa		12.78	□□□□□ -0.36
PHGDH-231	ENST00000641939	SOX7	Q9BT81	388 aa		12.78	□□□□□ -0.36
PHGDH-231	ENST00000641939	MMADHC	Q9H3L0	296 aa	Predicted RBP	12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms