RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 FBXW9Q5XUX1 488 aa11.86□□□□□ -0.51
HLA-C-210ENST00000640219 THSD4Q6ZMP0 1018 aa11.86□□□□□ -0.51
HLA-C-210ENST00000640219 ZNF730Q6ZMV8 503 aa11.86□□□□□ -0.51
HLA-C-210ENST00000640219 EGFL6Q8IUX8 553 aa11.86□□□□□ -0.51
HLA-C-210ENST00000640219 LSMEM1Q8N8F7 131 aa11.86□□□□□ -0.51
HLA-C-210ENST00000640219 STK35Q8TDR2 534 aa11.86□□□□□ -0.51
HLA-C-210ENST00000640219 MRPL24Q96A35 216 aaKnown RBP11.86□□□□□ -0.51
HLA-C-210ENST00000640219 OR5M11Q96RB7 305 aa11.86□□□□□ -0.51
HLA-C-210ENST00000640219 FUZQ9BT04 418 aa11.86□□□□□ -0.51
HLA-C-210ENST00000640219 CENPOQ9BU64 300 aa11.86□□□□□ -0.51
HLA-C-210ENST00000640219 CCDC32Q9BV29 185 aa11.86□□□□□ -0.51
HLA-C-210ENST00000640219 ASPNQ9BXN1 380 aa11.86□□□□□ -0.51
HLA-C-210ENST00000640219 POLR2J2Q9GZM3 115 aaKnown RBP11.86□□□□□ -0.51
HLA-C-210ENST00000640219 TMEM27Q9HBJ8 222 aa11.86□□□□□ -0.51
HLA-C-210ENST00000640219 ISYNA1Q9NPH2 558 aa11.86□□□□□ -0.51
HLA-C-210ENST00000640219 B3GAT1Q9P2W7 334 aa11.86□□□□□ -0.51
HLA-C-210ENST00000640219 DIMT1Q9UNQ2 313 aaKnown RBP11.86□□□□□ -0.51
HLA-C-210ENST00000640219 A0A087WUJ7 227 aa11.85□□□□□ -0.51
HLA-C-210ENST00000640219 B4DSR2 109 aa11.85□□□□□ -0.51
HLA-C-210ENST00000640219 ATP6V1G2-DDX39BF2Z307 99 aa11.85□□□□□ -0.51
HLA-C-210ENST00000640219 M0R129 80 aa11.85□□□□□ -0.51
HLA-C-210ENST00000640219 TBX1O43435 398 aa11.85□□□□□ -0.51
HLA-C-210ENST00000640219 EIF1BO60739 113 aaKnown RBP11.85□□□□□ -0.51
HLA-C-210ENST00000640219 UPK3AO75631 287 aa11.85□□□□□ -0.51
HLA-C-210ENST00000640219 BGLAPP02818 100 aa11.85□□□□□ -0.51
HLA-C-210ENST00000640219 TSPAN19P0C672 248 aa11.85□□□□□ -0.51
HLA-C-210ENST00000640219 TGFBR1P36897 503 aa11.85□□□□□ -0.51
HLA-C-210ENST00000640219 EIF2B2P49770 351 aaKnown RBP11.85□□□□□ -0.51
HLA-C-210ENST00000640219 CDK5Q00535 292 aa11.85□□□□□ -0.51
HLA-C-210ENST00000640219 IFITM3Q01628 133 aa11.85□□□□□ -0.51
HLA-C-210ENST00000640219 TSPAN31Q12999 210 aa11.85□□□□□ -0.51
HLA-C-210ENST00000640219 TMEM225Q6GV28 225 aa11.85□□□□□ -0.51
HLA-C-210ENST00000640219 SLC27A4Q6P1M0 643 aa11.85□□□□□ -0.51
HLA-C-210ENST00000640219 NIPAL3Q6P499 406 aa11.85□□□□□ -0.51
HLA-C-210ENST00000640219 ULK3Q6PHR2 472 aa11.85□□□□□ -0.51
HLA-C-210ENST00000640219 AAED1Q7RTV5 226 aa11.85□□□□□ -0.51
HLA-C-210ENST00000640219 RANBP3LQ86VV4 465 aaPredicted RBP11.85□□□□□ -0.51
HLA-C-210ENST00000640219 LYSMD2Q8IV50 215 aa11.85□□□□□ -0.51
HLA-C-210ENST00000640219 PARP16Q8N5Y8 322 aa11.85□□□□□ -0.51
HLA-C-210ENST00000640219 MFSD8Q8NHS3 518 aa11.85□□□□□ -0.51
HLA-C-210ENST00000640219 SLC7A13Q8TCU3 470 aa11.85□□□□□ -0.51
HLA-C-210ENST00000640219 RFKQ969G6 155 aa11.85□□□□□ -0.51
HLA-C-210ENST00000640219 SLC35B4Q969S0 331 aa11.85□□□□□ -0.51
HLA-C-210ENST00000640219 OPALINQ96PE5 141 aa11.85□□□□□ -0.51
HLA-C-210ENST00000640219 SLC30A2Q9BRI3 323 aa11.85□□□□□ -0.51
HLA-C-210ENST00000640219 H2AFY2Q9P0M6 372 aaPredicted RBP11.85□□□□□ -0.51
HLA-C-210ENST00000640219 SLC7A7Q9UM01 511 aa11.85□□□□□ -0.51
HLA-C-210ENST00000640219 PRKDCP78527 4128 aaKnown RBP11.85□□□□□ -0.51
HLA-C-210ENST00000640219 TRAV36DV7A0A075B6V5 113 aa11.84□□□□□ -0.51
HLA-C-210ENST00000640219 GPR171O14626 319 aa11.84□□□□□ -0.51
HLA-C-210ENST00000640219 PIP5K1CO60331 668 aa11.84□□□□□ -0.51
HLA-C-210ENST00000640219 HMGN1P05114 100 aa11.84□□□□□ -0.51
HLA-C-210ENST00000640219 DAOP14920 347 aa11.84□□□□□ -0.51
HLA-C-210ENST00000640219 EPHA1P21709 976 aa11.84□□□□□ -0.51
HLA-C-210ENST00000640219 FKBP2P26885 142 aaKnown RBP11.84□□□□□ -0.51
HLA-C-210ENST00000640219 GTF2E2P29084 291 aaKnown RBP11.84□□□□□ -0.51
HLA-C-210ENST00000640219 GRK5P34947 590 aa11.84□□□□□ -0.51
HLA-C-210ENST00000640219 CLDN17P56750 224 aa11.84□□□□□ -0.51
HLA-C-210ENST00000640219 RAB40BQ12829 278 aa11.84□□□□□ -0.51
HLA-C-210ENST00000640219 FOXL1Q12952 345 aa11.84□□□□□ -0.51
HLA-C-210ENST00000640219 HIKESHIQ53FT3 197 aa11.84□□□□□ -0.51
HLA-C-210ENST00000640219 PHYHD1Q5SRE7 291 aa11.84□□□□□ -0.51
HLA-C-210ENST00000640219 CARD17Q5XLA6 110 aa11.84□□□□□ -0.51
HLA-C-210ENST00000640219 RASSF6Q6ZTQ3 369 aa11.84□□□□□ -0.51
HLA-C-210ENST00000640219 CREB3L2Q70SY1 520 aa11.84□□□□□ -0.51
HLA-C-210ENST00000640219 ZER1Q7Z7L7 766 aa11.84□□□□□ -0.51
HLA-C-210ENST00000640219 NKAIN4Q8IVV8 208 aa11.84□□□□□ -0.51
HLA-C-210ENST00000640219 C10orf53Q8N6V4 93 aa11.84□□□□□ -0.51
HLA-C-210ENST00000640219 PFN4Q8NHR9 129 aa11.84□□□□□ -0.51
HLA-C-210ENST00000640219 TMEM163Q8TC26 289 aa11.84□□□□□ -0.51
HLA-C-210ENST00000640219 DNAJA4Q8WW22 397 aaPredicted RBP11.84□□□□□ -0.51
HLA-C-210ENST00000640219 EMC6Q9BV81 110 aa11.84□□□□□ -0.51
HLA-C-210ENST00000640219 RAB1BQ9H0U4 201 aa11.84□□□□□ -0.51
HLA-C-210ENST00000640219 EVA1AQ9H8M9 152 aa11.84□□□□□ -0.51
HLA-C-210ENST00000640219 SMURF1Q9HCE7 757 aa11.84□□□□□ -0.51
HLA-C-210ENST00000640219 FGF20Q9NP95 211 aaPredicted RBP11.84□□□□□ -0.51
HLA-C-210ENST00000640219 MRPS18AQ9NVS2 196 aaKnown RBP11.84□□□□□ -0.51
HLA-C-210ENST00000640219 HIF1ANQ9NWT6 349 aa11.84□□□□□ -0.51
HLA-C-210ENST00000640219 ASB6Q9NWX5 421 aa11.84□□□□□ -0.51
HLA-C-210ENST00000640219 UPB1Q9UBR1 384 aa11.84□□□□□ -0.51
HLA-C-210ENST00000640219 MALT1Q9UDY8 824 aa11.84□□□□□ -0.51
HLA-C-210ENST00000640219 MOKQ9UQ07 419 aa11.84□□□□□ -0.51
HLA-C-210ENST00000640219 GSTK1Q9Y2Q3 226 aa11.84□□□□□ -0.51
HLA-C-210ENST00000640219 GRIP1Q9Y3R0 1128 aa11.84□□□□□ -0.51
HLA-C-210ENST00000640219 SPEF1Q9Y4P9 236 aa11.84□□□□□ -0.51
HLA-C-210ENST00000640219 C11orf98E9PRG8 122 aa11.83□□□□□ -0.52
HLA-C-210ENST00000640219 MS4A18H0YCH9 400 aa11.83□□□□□ -0.52
HLA-C-210ENST00000640219 PRODHO43272 600 aa11.83□□□□□ -0.52
HLA-C-210ENST00000640219 GPX5O75715 221 aa11.83□□□□□ -0.52
HLA-C-210ENST00000640219 OR5F1O95221 314 aa11.83□□□□□ -0.52
HLA-C-210ENST00000640219 SERPINF1P36955 418 aa11.83□□□□□ -0.52
HLA-C-210ENST00000640219 GABRA6Q16445 453 aa11.83□□□□□ -0.52
HLA-C-210ENST00000640219 MS4A18Q3C1V0 323 aa11.83□□□□□ -0.52
HLA-C-210ENST00000640219 FAM69AQ5T7M9 428 aa11.83□□□□□ -0.52
HLA-C-210ENST00000640219 OR7E24Q6IFN5 339 aa11.83□□□□□ -0.52
HLA-C-210ENST00000640219 WDR31Q8NA23 367 aa11.83□□□□□ -0.52
HLA-C-210ENST00000640219 OR52I1Q8NGK6 324 aa11.83□□□□□ -0.52
HLA-C-210ENST00000640219 SETD6Q8TBK2 473 aa11.83□□□□□ -0.52
HLA-C-210ENST00000640219 ITFG2Q969R8 447 aa11.83□□□□□ -0.52
HLA-C-210ENST00000640219 TMEM45BQ96B21 275 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms