RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 PHYHIPQ92561 330 aa10.31□□□□□ -0.76
CLN6-223ENST00000637823 BCL2L2Q92843 193 aaPredicted RBP10.31□□□□□ -0.76
CLN6-223ENST00000637823 C4orf45Q96LM5 186 aa10.31□□□□□ -0.76
CLN6-223ENST00000637823 KCNJ15Q99712 375 aa10.31□□□□□ -0.76
CLN6-223ENST00000637823 ATF6BQ99941 703 aa10.31□□□□□ -0.76
CLN6-223ENST00000637823 COMMD4Q9H0A8 199 aa10.31□□□□□ -0.76
CLN6-223ENST00000637823 HDHD2Q9H0R4 259 aa10.31□□□□□ -0.76
CLN6-223ENST00000637823 PLEK2Q9NYT0 353 aa10.31□□□□□ -0.76
CLN6-223ENST00000637823 PTTG2Q9NZH5 202 aa10.31□□□□□ -0.76
CLN6-223ENST00000637823 OR52A1Q9UKL2 312 aa10.31□□□□□ -0.76
CLN6-223ENST00000637823 SLC5A6Q9Y289 635 aa10.31□□□□□ -0.76
CLN6-223ENST00000637823 TPRP12270 2363 aaKnown RBP10.31□□□□□ -0.76
CLN6-223ENST00000637823 ARPC4-TTLL3A0A0A6YYG9 625 aa10.3□□□□□ -0.76
CLN6-223ENST00000637823 A0A1W2PPW3 197 aa10.3□□□□□ -0.76
CLN6-223ENST00000637823 LOC110117498-PIK3R3F6TDL0 507 aa10.3□□□□□ -0.76
CLN6-223ENST00000637823 SYNGR3O43761 229 aa10.3□□□□□ -0.76
CLN6-223ENST00000637823 GATBO75879 557 aaKnown RBP10.3□□□□□ -0.76
CLN6-223ENST00000637823 ZFPL1O95159 310 aa10.3□□□□□ -0.76
CLN6-223ENST00000637823 IL18BPO95998 194 aa10.3□□□□□ -0.76
CLN6-223ENST00000637823 MMP7P09237 267 aaPredicted RBP10.3□□□□□ -0.76
CLN6-223ENST00000637823 HOXB1P14653 301 aaPredicted RBP10.3□□□□□ -0.76
CLN6-223ENST00000637823 ZNF32P17041 273 aa10.3□□□□□ -0.76
CLN6-223ENST00000637823 KIR3DL2P43630 455 aa10.3□□□□□ -0.76
CLN6-223ENST00000637823 RPS11P62280 158 aaKnown RBP eCLIP10.3□□□□□ -0.76
CLN6-223ENST00000637823 PSG4Q00888 419 aa10.3□□□□□ -0.76
CLN6-223ENST00000637823 ACSM3Q53FZ2 586 aa10.3□□□□□ -0.76
CLN6-223ENST00000637823 SOWAHCQ53LP3 525 aaPredicted RBP10.3□□□□□ -0.76
CLN6-223ENST00000637823 WDR38Q5JTN6 314 aa10.3□□□□□ -0.76
CLN6-223ENST00000637823 C22orf42Q6IC83 251 aa10.3□□□□□ -0.76
CLN6-223ENST00000637823 TMEM53Q6P2H8 277 aa10.3□□□□□ -0.76
CLN6-223ENST00000637823 C3P1Q6ZMU1 363 aa10.3□□□□□ -0.76
CLN6-223ENST00000637823 ZNF704Q6ZNC4 412 aaPredicted RBP10.3□□□□□ -0.76
CLN6-223ENST00000637823 BEND4Q6ZU67 534 aa10.3□□□□□ -0.76
CLN6-223ENST00000637823 CCDC36Q8IYA8 594 aa10.3□□□□□ -0.76
CLN6-223ENST00000637823 ZNF433Q8N7K0 673 aaPredicted RBP10.3□□□□□ -0.76
CLN6-223ENST00000637823 ZNF676Q8N7Q3 588 aa10.3□□□□□ -0.76
CLN6-223ENST00000637823 ZNF610Q8N9Z0 462 aa10.3□□□□□ -0.76
CLN6-223ENST00000637823 ST6GALNAC3Q8NDV1 305 aa10.3□□□□□ -0.76
CLN6-223ENST00000637823 IL17RDQ8NFM7 739 aa10.3□□□□□ -0.76
CLN6-223ENST00000637823 OR1F12Q8NHA8 337 aa10.3□□□□□ -0.76
CLN6-223ENST00000637823 FGFBP3Q8TAT2 258 aa10.3□□□□□ -0.76
CLN6-223ENST00000637823 NDNFQ8TB73 568 aa10.3□□□□□ -0.76
CLN6-223ENST00000637823 SPTSSAQ969W0 71 aa10.3□□□□□ -0.76
CLN6-223ENST00000637823 TRMT61AQ96FX7 289 aaKnown RBP10.3□□□□□ -0.76
CLN6-223ENST00000637823 BOD1Q96IK1 185 aa10.3□□□□□ -0.76
CLN6-223ENST00000637823 KCTD7Q96MP8 289 aa10.3□□□□□ -0.76
CLN6-223ENST00000637823 PDCD1LG2Q9BQ51 273 aa10.3□□□□□ -0.76
CLN6-223ENST00000637823 SFXN3Q9BWM7 321 aa10.3□□□□□ -0.76
CLN6-223ENST00000637823 OR2H1Q9GZK4 316 aa10.3□□□□□ -0.76
CLN6-223ENST00000637823 WNT5BQ9H1J7 359 aa10.3□□□□□ -0.76
CLN6-223ENST00000637823 DCSTAMPQ9H295 470 aa10.3□□□□□ -0.76
CLN6-223ENST00000637823 RNF121Q9H920 327 aa10.3□□□□□ -0.76
CLN6-223ENST00000637823 G6PC2Q9NQR9 355 aa10.3□□□□□ -0.76
CLN6-223ENST00000637823 FAM206AQ9NX38 181 aa10.3□□□□□ -0.76
CLN6-223ENST00000637823 FBXL3Q9UKT7 428 aa10.3□□□□□ -0.76
CLN6-223ENST00000637823 ACACBO00763 2458 aa10.3□□□□□ -0.76
CLN6-223ENST00000637823 RP1L1Q8IWN7 2480 aaPredicted RBP10.3□□□□□ -0.76
CLN6-223ENST00000637823 ITPR1Q14643 2758 aa10.3□□□□□ -0.76
CLN6-223ENST00000637823 PKD1L2Q7Z442 2459 aa10.29□□□□□ -0.76
CLN6-223ENST00000637823 A0A096LPE4 126 aa10.29□□□□□ -0.76
CLN6-223ENST00000637823 A0A1W2PPZ6 126 aa10.29□□□□□ -0.76
CLN6-223ENST00000637823 OR6C6A6NF89 314 aa10.29□□□□□ -0.76
CLN6-223ENST00000637823 DOK2O60496 412 aa10.29□□□□□ -0.76
CLN6-223ENST00000637823 SC5DO75845 299 aa10.29□□□□□ -0.76
CLN6-223ENST00000637823 UBL3O95164 117 aa10.29□□□□□ -0.76
CLN6-223ENST00000637823 PATE4P0C8F1 98 aa10.29□□□□□ -0.76
CLN6-223ENST00000637823 IGHV1-2P23083 117 aa10.29□□□□□ -0.76
CLN6-223ENST00000637823 PCSK6P29122 969 aa10.29□□□□□ -0.76
CLN6-223ENST00000637823 OTX1P32242 354 aaPredicted RBP10.29□□□□□ -0.76
CLN6-223ENST00000637823 OPRM1P35372 400 aa10.29□□□□□ -0.76
CLN6-223ENST00000637823 TGFBR1P36897 503 aa10.29□□□□□ -0.76
CLN6-223ENST00000637823 SERPINB10P48595 397 aa10.29□□□□□ -0.76
CLN6-223ENST00000637823 PRKXP51817 358 aa10.29□□□□□ -0.76
CLN6-223ENST00000637823 CASP6P55212 293 aa10.29□□□□□ -0.76
CLN6-223ENST00000637823 PSMA6P60900 246 aaKnown RBP10.29□□□□□ -0.76
CLN6-223ENST00000637823 MFGE8Q08431 387 aaPredicted RBP10.29□□□□□ -0.76
CLN6-223ENST00000637823 PMPCAQ10713 525 aa10.29□□□□□ -0.76
CLN6-223ENST00000637823 P2RY6Q15077 328 aa10.29□□□□□ -0.76
CLN6-223ENST00000637823 RSPO1Q2MKA7 263 aaPredicted RBP10.29□□□□□ -0.76
CLN6-223ENST00000637823 BCL2L15Q5TBC7 163 aa10.29□□□□□ -0.76
CLN6-223ENST00000637823 TMEM244Q5VVB8 128 aa10.29□□□□□ -0.76
CLN6-223ENST00000637823 TMEM211Q6ICI0 200 aa10.29□□□□□ -0.76
CLN6-223ENST00000637823 ZNF774Q6NX45 483 aa10.29□□□□□ -0.76
CLN6-223ENST00000637823 PCSK4Q6UW60 755 aa10.29□□□□□ -0.76
CLN6-223ENST00000637823 CEACAM19Q7Z692 300 aa10.29□□□□□ -0.76
CLN6-223ENST00000637823 RPRMLQ8N4K4 120 aa10.29□□□□□ -0.76
CLN6-223ENST00000637823 ZNF283Q8N7M2 679 aa10.29□□□□□ -0.76
CLN6-223ENST00000637823 DYNC2LI1Q8TCX1 351 aa10.29□□□□□ -0.76
CLN6-223ENST00000637823 THRSPQ92748 146 aa10.29□□□□□ -0.76
CLN6-223ENST00000637823 MED18Q9BUE0 208 aa10.29□□□□□ -0.76
CLN6-223ENST00000637823 PBOV1Q9GZY1 135 aa10.29□□□□□ -0.76
CLN6-223ENST00000637823 PIGMQ9H3S5 423 aa10.29□□□□□ -0.76
CLN6-223ENST00000637823 RNF167Q9H6Y7 350 aa10.29□□□□□ -0.76
CLN6-223ENST00000637823 MOB1AQ9H8S9 216 aa10.29□□□□□ -0.76
CLN6-223ENST00000637823 GALNT8Q9NY28 637 aa10.29□□□□□ -0.76
CLN6-223ENST00000637823 ZNF224Q9NZL3 707 aa10.29□□□□□ -0.76
CLN6-223ENST00000637823 ATPIF1Q9UII2 106 aa10.29□□□□□ -0.76
CLN6-223ENST00000637823 GTF2A1LQ9UNN4 478 aa10.29□□□□□ -0.76
CLN6-223ENST00000637823 SLC22A13Q9Y226 551 aa10.29□□□□□ -0.76
CLN6-223ENST00000637823 TRBV5-5A0A0J9YX44 114 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms