RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 GDI1P31150 447 aa13.28□□□□□ -0.28
CACNA1A-220ENST00000635988 HRH1P35367 487 aa13.28□□□□□ -0.28
CACNA1A-220ENST00000635988 BTG2P78543 158 aa13.28□□□□□ -0.28
CACNA1A-220ENST00000635988 MST1LQ2TV78 715 aa13.28□□□□□ -0.28
CACNA1A-220ENST00000635988 TMEM200AQ86VY9 491 aa13.28□□□□□ -0.28
CACNA1A-220ENST00000635988 ZNF615Q8N8J6 731 aa13.28□□□□□ -0.28
CACNA1A-220ENST00000635988 ZSCAN1Q8NBB4 408 aa13.28□□□□□ -0.28
CACNA1A-220ENST00000635988 CHST4Q8NCG5 386 aa13.28□□□□□ -0.28
CACNA1A-220ENST00000635988 ADAD2Q8NCV1 583 aaKnown RBP13.28□□□□□ -0.28
CACNA1A-220ENST00000635988 OR10R2Q8NGX6 335 aa13.28□□□□□ -0.28
CACNA1A-220ENST00000635988 OR52N5Q8NH56 324 aa13.28□□□□□ -0.28
CACNA1A-220ENST00000635988 NUDCD2Q8WVJ2 157 aa13.28□□□□□ -0.28
CACNA1A-220ENST00000635988 ELSPBP1Q96BH3 223 aa13.28□□□□□ -0.28
CACNA1A-220ENST00000635988 SMIM8Q96KF7 97 aa13.28□□□□□ -0.28
CACNA1A-220ENST00000635988 ELF4Q99607 663 aaPredicted RBP13.28□□□□□ -0.28
CACNA1A-220ENST00000635988 ACKR4Q9NPB9 350 aa13.28□□□□□ -0.28
CACNA1A-220ENST00000635988 MRPL22Q9NWU5 206 aaKnown RBP13.28□□□□□ -0.28
CACNA1A-220ENST00000635988 VSX1Q9NZR4 365 aaPredicted RBP13.28□□□□□ -0.28
CACNA1A-220ENST00000635988 IGLV1-36A0A0B4J1U3 117 aa13.27□□□□□ -0.29
CACNA1A-220ENST00000635988 SLC16A7O60669 478 aa13.27□□□□□ -0.29
CACNA1A-220ENST00000635988 EIF3GO75821 320 aaKnown RBP eCLIP13.27□□□□□ -0.29
CACNA1A-220ENST00000635988 IL33O95760 270 aa13.27□□□□□ -0.29
CACNA1A-220ENST00000635988 F12P00748 615 aaPredicted RBP13.27□□□□□ -0.29
CACNA1A-220ENST00000635988 MT-ATP6P00846 226 aa13.27□□□□□ -0.29
CACNA1A-220ENST00000635988 BGLAPP02818 100 aa13.27□□□□□ -0.29
CACNA1A-220ENST00000635988 LYL1P12980 280 aa13.27□□□□□ -0.29
CACNA1A-220ENST00000635988 CXCR1P25024 350 aa13.27□□□□□ -0.29
CACNA1A-220ENST00000635988 TMEM128Q5BJH2 165 aa13.27□□□□□ -0.29
CACNA1A-220ENST00000635988 TMEM244Q5VVB8 128 aa13.27□□□□□ -0.29
CACNA1A-220ENST00000635988 ZNF585AQ6P3V2 769 aa13.27□□□□□ -0.29
CACNA1A-220ENST00000635988 PRSS54Q6PEW0 395 aa13.27□□□□□ -0.29
CACNA1A-220ENST00000635988 LYPD6Q86Y78 171 aa13.27□□□□□ -0.29
CACNA1A-220ENST00000635988 MISPQ8IVT2 679 aa13.27□□□□□ -0.29
CACNA1A-220ENST00000635988 C15orf54Q8N8G6 183 aa13.27□□□□□ -0.29
CACNA1A-220ENST00000635988 ZSCAN4Q8NAM6 433 aaPredicted RBP13.27□□□□□ -0.29
CACNA1A-220ENST00000635988 ADAMTS17Q8TE56 1095 aa13.27□□□□□ -0.29
CACNA1A-220ENST00000635988 NKD1Q969G9 470 aa13.27□□□□□ -0.29
CACNA1A-220ENST00000635988 TMEM231Q9H6L2 316 aa13.27□□□□□ -0.29
CACNA1A-220ENST00000635988 RAB18Q9NP72 206 aa13.27□□□□□ -0.29
CACNA1A-220ENST00000635988 LOC107986453A0A1B0GWG9 222 aa13.27□□□□□ -0.29
CACNA1A-220ENST00000635988 FOSL1P15407 271 aa13.27□□□□□ -0.29
CACNA1A-220ENST00000635988 POLR2GP62487 172 aaKnown RBP eCLIP13.27□□□□□ -0.29
CACNA1A-220ENST00000635988 SGCBQ16585 318 aa13.27□□□□□ -0.29
CACNA1A-220ENST00000635988 SGCAQ16586 387 aa13.27□□□□□ -0.29
CACNA1A-220ENST00000635988 IGSF11Q5DX21 431 aa13.27□□□□□ -0.29
CACNA1A-220ENST00000635988 HOGA1Q86XE5 327 aa13.27□□□□□ -0.29
CACNA1A-220ENST00000635988 OR4D6Q8NGJ1 314 aa13.27□□□□□ -0.29
CACNA1A-220ENST00000635988 OR6S1Q8NH40 331 aa13.27□□□□□ -0.29
CACNA1A-220ENST00000635988 ZNF519Q8TB69 540 aa13.27□□□□□ -0.29
CACNA1A-220ENST00000635988 AQP10Q96PS8 301 aa13.27□□□□□ -0.29
CACNA1A-220ENST00000635988 SEC61A2Q9H9S3 476 aa13.27□□□□□ -0.29
CACNA1A-220ENST00000635988 POMT1Q9Y6A1 747 aa13.27□□□□□ -0.29
CACNA1A-220ENST00000635988 SPTBP11277 2137 aa13.26□□□□□ -0.29
CACNA1A-220ENST00000635988 PTPRSQ13332 1948 aa13.26□□□□□ -0.29
CACNA1A-220ENST00000635988 A0A0A6YYC8 382 aaPredicted RBP13.26□□□□□ -0.29
CACNA1A-220ENST00000635988 COLCA2A8K830 154 aa13.26□□□□□ -0.29
CACNA1A-220ENST00000635988 C1orf196B1AJZ1 125 aa13.26□□□□□ -0.29
CACNA1A-220ENST00000635988 C11orf98E9PRG8 122 aa13.26□□□□□ -0.29
CACNA1A-220ENST00000635988 I3L1I5 382 aaPredicted RBP13.26□□□□□ -0.29
CACNA1A-220ENST00000635988 FARS2O95363 451 aaKnown RBP13.26□□□□□ -0.29
CACNA1A-220ENST00000635988 CRABP1P29762 137 aa13.26□□□□□ -0.29
CACNA1A-220ENST00000635988 PTGFRP43088 359 aa13.26□□□□□ -0.29
CACNA1A-220ENST00000635988 GLO1Q04760 184 aa13.26□□□□□ -0.29
CACNA1A-220ENST00000635988 ACKR1Q16570 336 aa13.26□□□□□ -0.29
CACNA1A-220ENST00000635988 OR52W1Q6IF63 320 aa13.26□□□□□ -0.29
CACNA1A-220ENST00000635988 ARHGEF39Q8N4T4 335 aa13.26□□□□□ -0.29
CACNA1A-220ENST00000635988 GVQW1Q8N7I0 195 aa13.26□□□□□ -0.29
CACNA1A-220ENST00000635988 RRNAD1Q96FB5 475 aaKnown RBP13.26□□□□□ -0.29
CACNA1A-220ENST00000635988 MICU1Q9BPX6 476 aa13.26□□□□□ -0.29
CACNA1A-220ENST00000635988 ZNF251Q9BRH9 671 aa13.26□□□□□ -0.29
CACNA1A-220ENST00000635988 LAT2Q9GZY6 243 aa13.26□□□□□ -0.29
CACNA1A-220ENST00000635988 DNAJB11Q9UBS4 358 aa13.26□□□□□ -0.29
CACNA1A-220ENST00000635988 RNASEK-C17orf49H0YIS7 233 aa13.26□□□□□ -0.29
CACNA1A-220ENST00000635988 SRSF10O75494 262 aaKnown RBP13.26□□□□□ -0.29
CACNA1A-220ENST00000635988 BPNT1O95861 308 aa13.26□□□□□ -0.29
CACNA1A-220ENST00000635988 ACAA1P09110 424 aaPredicted RBP13.26□□□□□ -0.29
CACNA1A-220ENST00000635988 PET100P0DJ07 73 aa13.26□□□□□ -0.29
CACNA1A-220ENST00000635988 MUC1P15941 1255 aaPredicted RBP13.26□□□□□ -0.29
CACNA1A-220ENST00000635988 PTAFRP25105 342 aa13.26□□□□□ -0.29
CACNA1A-220ENST00000635988 HSD11B1P28845 292 aa13.26□□□□□ -0.29
CACNA1A-220ENST00000635988 GALNSP34059 522 aa13.26□□□□□ -0.29
CACNA1A-220ENST00000635988 MNX1P50219 401 aaPredicted RBP13.26□□□□□ -0.29
CACNA1A-220ENST00000635988 ECH1Q13011 328 aa13.26□□□□□ -0.29
CACNA1A-220ENST00000635988 FAM109BQ6ICB4 259 aaPredicted RBP13.26□□□□□ -0.29
CACNA1A-220ENST00000635988 ZFP82Q8N141 532 aa13.26□□□□□ -0.29
CACNA1A-220ENST00000635988 C12orf76Q8N812 135 aaPredicted RBP13.26□□□□□ -0.29
CACNA1A-220ENST00000635988 TCEAL7Q9BRU2 100 aa13.26□□□□□ -0.29
CACNA1A-220ENST00000635988 CRB3Q9BUF7 120 aa13.26□□□□□ -0.29
CACNA1A-220ENST00000635988 EGLN1Q9GZT9 426 aa13.26□□□□□ -0.29
CACNA1A-220ENST00000635988 TXNIPQ9H3M7 391 aa13.26□□□□□ -0.29
CACNA1A-220ENST00000635988 HRH4Q9H3N8 390 aa13.26□□□□□ -0.29
CACNA1A-220ENST00000635988 OR52A1Q9UKL2 312 aa13.26□□□□□ -0.29
CACNA1A-220ENST00000635988 EMC9Q9Y3B6 208 aa13.26□□□□□ -0.29
CACNA1A-220ENST00000635988 OR2W5A6NFC9 320 aa13.25□□□□□ -0.29
CACNA1A-220ENST00000635988 TAAR5O14804 337 aa13.25□□□□□ -0.29
CACNA1A-220ENST00000635988 KCNAB3O43448 404 aa13.25□□□□□ -0.29
CACNA1A-220ENST00000635988 FKTNO75072 461 aa13.25□□□□□ -0.29
CACNA1A-220ENST00000635988 UTS2O95399 124 aa13.25□□□□□ -0.29
CACNA1A-220ENST00000635988 NFYBP25208 207 aa13.25□□□□□ -0.29
CACNA1A-220ENST00000635988 INSM1Q01101 510 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms