RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 CD97P48960 835 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 OR10A3P58181 314 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 NANOS3P60323 173 aaKnown RBP6.38□□□□□ -1.39
BRCA1-230ENST00000634433 EIF2B1Q14232 305 aaKnown RBP6.38□□□□□ -1.39
BRCA1-230ENST00000634433 SF3A2Q15428 464 aaKnown RBP6.38□□□□□ -1.39
BRCA1-230ENST00000634433 TAB1Q15750 504 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 LRRN1Q6UXK5 716 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 NRARPQ7Z6K4 114 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 NR2C2APQ86WQ0 139 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 NAXDQ8IW45 347 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 BVESQ8NE79 360 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 OR1J4Q8NGS1 313 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 RRNAD1Q96FB5 475 aaKnown RBP6.38□□□□□ -1.39
BRCA1-230ENST00000634433 TXNDC15Q96J42 360 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 OXGR1Q96P68 337 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 OR5B2Q96R09 309 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 TREM1Q9NP99 234 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 BRD7Q9NPI1 651 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 SLCO1C1Q9NYB5 712 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 KCNG2Q9UJ96 466 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 FBXL2Q9UKC9 423 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 V9GY05 133 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 PCNX3Q9H6A9 2034 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 CCDC187A0A096LP49 1063 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 TEX51A0A1B0GUA7 166 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 A0A1W2PPK0 400 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 GJE1A6NN92 205 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 PRR32B1ATL7 298 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 B4DXG7 233 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 HSBP1L1C9JCN9 74 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 AIPO00170 330 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 DNPH1O43598 174 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 EFNA2O43921 213 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 EIF1BO60739 113 aaKnown RBP6.38□□□□□ -1.39
BRCA1-230ENST00000634433 CBR3O75828 277 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 ACTL6BO94805 426 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 PMS2P2O95744 297 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 IGHG1P01857 330 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 P04436 131 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 HLA-DOBP13765 273 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 CD59P13987 128 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 SPNP16150 400 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 OTX2P32243 289 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 GATA4P43694 442 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 CLRN1P58418 232 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 MADCAM1Q13477 382 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 SLC25A35Q3KQZ1 300 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 TMEM176BQ3YBM2 270 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-230ENST00000634433 TMEM225Q6GV28 225 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 TMPPEQ6ZT21 453 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 GLB1L2Q8IW92 636 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 KDM8Q8N371 416 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 ENKURQ8TC29 256 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 CT55Q8WUE5 264 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 C15orf40Q8WUR7 153 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 RNF166Q96A37 237 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-230ENST00000634433 PLPPR2Q96GM1 343 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 C4orf45Q96LM5 186 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 NPAS1Q99742 590 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 SRSF8Q9BRL6 282 aaKnown RBP6.38□□□□□ -1.39
BRCA1-230ENST00000634433 PARD6GQ9BYG4 376 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-230ENST00000634433 HDHD2Q9H0R4 259 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 SH2D2AQ9NP31 389 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 CENPMQ9NSP4 180 aa6.38□□□□□ -1.39
BRCA1-230ENST00000634433 MRPL22Q9NWU5 206 aaKnown RBP6.38□□□□□ -1.39
BRCA1-230ENST00000634433 AK6Q9Y3D8 172 aaKnown RBP6.38□□□□□ -1.39
BRCA1-230ENST00000634433 C5orf51A6NDU8 294 aa6.37□□□□□ -1.39
BRCA1-230ENST00000634433 ZNF726A6NNF4 738 aa6.37□□□□□ -1.39
BRCA1-230ENST00000634433 SHISA8B8ZZ34 492 aa6.37□□□□□ -1.39
BRCA1-230ENST00000634433 SULT2B1O00204 365 aa6.37□□□□□ -1.39
BRCA1-230ENST00000634433 TSPAN9O75954 239 aa6.37□□□□□ -1.39
BRCA1-230ENST00000634433 VAMP5O95183 116 aa6.37□□□□□ -1.39
BRCA1-230ENST00000634433 SPDEFO95238 335 aa6.37□□□□□ -1.39
BRCA1-230ENST00000634433 SERPINA7P05543 415 aa6.37□□□□□ -1.39
BRCA1-230ENST00000634433 CELA2AP08217 269 aa6.37□□□□□ -1.39
BRCA1-230ENST00000634433 ZNF806P0C7X5 589 aa6.37□□□□□ -1.39
BRCA1-230ENST00000634433 CALCBP10092 127 aa6.37□□□□□ -1.39
BRCA1-230ENST00000634433 LIFP15018 202 aa6.37□□□□□ -1.39
BRCA1-230ENST00000634433 ZNF17P17021 662 aa6.37□□□□□ -1.39
BRCA1-230ENST00000634433 ZNF43P17038 809 aa6.37□□□□□ -1.39
BRCA1-230ENST00000634433 ATF1P18846 271 aa6.37□□□□□ -1.39
BRCA1-230ENST00000634433 MAP2K3P46734 347 aa6.37□□□□□ -1.39
BRCA1-230ENST00000634433 STARP49675 285 aa6.37□□□□□ -1.39
BRCA1-230ENST00000634433 BIDP55957 195 aa6.37□□□□□ -1.39
BRCA1-230ENST00000634433 CSNK2A1P68400 391 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-230ENST00000634433 PCK2Q16822 640 aa6.37□□□□□ -1.39
BRCA1-230ENST00000634433 UBE2NLQ5JXB2 153 aa6.37□□□□□ -1.39
BRCA1-230ENST00000634433 PRAMEF20Q5VT98 475 aa6.37□□□□□ -1.39
BRCA1-230ENST00000634433 KCTD9Q7L273 389 aa6.37□□□□□ -1.39
BRCA1-230ENST00000634433 PPP1R32Q7Z5V6 425 aa6.37□□□□□ -1.39
BRCA1-230ENST00000634433 AKAP14Q86UN6 197 aa6.37□□□□□ -1.39
BRCA1-230ENST00000634433 OR4M1Q8NGD0 313 aa6.37□□□□□ -1.39
BRCA1-230ENST00000634433 OR52N5Q8NH56 324 aa6.37□□□□□ -1.39
BRCA1-230ENST00000634433 OR6X1Q8NH79 312 aa6.37□□□□□ -1.39
BRCA1-230ENST00000634433 WFDC12Q8WWY7 111 aa6.37□□□□□ -1.39
BRCA1-230ENST00000634433 RFT1Q96AA3 541 aa6.37□□□□□ -1.39
BRCA1-230ENST00000634433 MIB2Q96AX9 1013 aa6.37□□□□□ -1.39
BRCA1-230ENST00000634433 NTNG2Q96CW9 530 aa6.37□□□□□ -1.39
BRCA1-230ENST00000634433 SLC25A44Q96H78 314 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-230ENST00000634433 ZC3HAV1LQ96H79 300 aaKnown RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms