RNA–Protein interactions for RNA: ENST00000634348.1

SRSF4-208, Transcript of serine and arginine rich splicing factor 4, human

TSL 5

Gene SRSF4, Length 8,128 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRSF4-208	ENST00000634348	MOGAT1	Q96PD6	335 aa		10.43	□□□□□ -0.74
SRSF4-208	ENST00000634348	SLC35B3	Q9H1N7	401 aa		10.43	□□□□□ -0.74
SRSF4-208	ENST00000634348	IL19	Q9UHD0	177 aa		10.43	□□□□□ -0.74
SRSF4-208	ENST00000634348	TIMM9	Q9Y5J7	89 aa		10.43	□□□□□ -0.74
SRSF4-208	ENST00000634348	SULT2B1	O00204	365 aa		10.43	□□□□□ -0.74
SRSF4-208	ENST00000634348	PPP6C	O00743	305 aa		10.43	□□□□□ -0.74
SRSF4-208	ENST00000634348	OPN1MW	P04001	364 aa		10.43	□□□□□ -0.74
SRSF4-208	ENST00000634348	OPN1MW2	P0DN77	364 aa		10.43	□□□□□ -0.74
SRSF4-208	ENST00000634348	OPN1MW3	P0DN78	364 aa		10.43	□□□□□ -0.74
SRSF4-208	ENST00000634348	ADPRH	P54922	357 aa		10.43	□□□□□ -0.74
SRSF4-208	ENST00000634348	RHOB	P62745	196 aa		10.43	□□□□□ -0.74
SRSF4-208	ENST00000634348	ZNF600	Q6ZNG1	722 aa		10.43	□□□□□ -0.74
SRSF4-208	ENST00000634348	OR5D18	Q8NGL1	313 aa		10.43	□□□□□ -0.74
SRSF4-208	ENST00000634348	ASIC5	Q9NY37	505 aa		10.43	□□□□□ -0.74
SRSF4-208	ENST00000634348	GLRA1	P23415	457 aa		10.43	□□□□□ -0.74
SRSF4-208	ENST00000634348	CD200	P41217	278 aa		10.43	□□□□□ -0.74
SRSF4-208	ENST00000634348	RPS25	P62851	125 aa	Known RBP	10.43	□□□□□ -0.74
SRSF4-208	ENST00000634348	RGN	Q15493	299 aa		10.43	□□□□□ -0.74
SRSF4-208	ENST00000634348	MIDN	Q504T8	468 aa		10.43	□□□□□ -0.74
SRSF4-208	ENST00000634348	BCL2L2	Q92843	193 aa	Predicted RBP	10.43	□□□□□ -0.74
SRSF4-208	ENST00000634348	VEGFD	O43915	354 aa		10.43	□□□□□ -0.74
SRSF4-208	ENST00000634348	KLF7	O75840	302 aa	Predicted RBP	10.43	□□□□□ -0.74
SRSF4-208	ENST00000634348	TMIGD3	P0DMS9	266 aa	Predicted RBP	10.43	□□□□□ -0.74
SRSF4-208	ENST00000634348	SLC6A11	P48066	632 aa		10.43	□□□□□ -0.74
SRSF4-208	ENST00000634348	ALKBH1	Q13686	389 aa	Known RBP	10.43	□□□□□ -0.74
SRSF4-208	ENST00000634348	CYHR1	Q6ZMK1	362 aa		10.43	□□□□□ -0.74
SRSF4-208	ENST00000634348	PLXDC1	Q8IUK5	500 aa		10.43	□□□□□ -0.74
SRSF4-208	ENST00000634348	SLC26A10	Q8NG04	563 aa		10.43	□□□□□ -0.74
SRSF4-208	ENST00000634348	LRRC3B	Q96PB8	259 aa		10.43	□□□□□ -0.74
SRSF4-208	ENST00000634348	ATP5S	Q99766	215 aa		10.43	□□□□□ -0.74
SRSF4-208	ENST00000634348	CPOX	P36551	454 aa		10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	ZNF140	P52738	457 aa	Predicted RBP	10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	ZNF77	Q15935	545 aa		10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	10.42	□□□□□ -0.74	3e-7	■■■□□ 16.8
SRSF4-208	ENST00000634348	COL3A1	P02461	1466 aa	Predicted RBP	10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	ANKRD61	A6NGH8	418 aa		10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	UTS2	O95399	124 aa		10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	RECK	O95980	971 aa		10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	CA3	P07451	260 aa		10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	SLC6A8	P48029	635 aa		10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	OR7E24	Q6IFN5	339 aa		10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	VAMP5	O95183	116 aa		10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	SLC25A5	P05141	298 aa	Known RBP	10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	CHRM2	P08172	466 aa		10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	HNRNPA1	P09651	372 aa	Known RBP eCLIP	10.42	□□□□□ -0.74	5e-7	■□□□□ 8.4
SRSF4-208	ENST00000634348	SLC35A1	P78382	337 aa		10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	HNRNPA1L2	Q32P51	320 aa	Known RBP	10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	LEXM	Q3ZCV2	418 aa		10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	RPL3L	Q92901	407 aa	Known RBP	10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	ZFYVE21	Q9BQ24	234 aa		10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	VCX2	Q9H322	139 aa		10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	RIMS4	Q9H426	269 aa	Predicted RBP	10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	OBP2B	Q9NPH6	170 aa		10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	PIPOX	Q9P0Z9	390 aa		10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	PTRH2	Q9Y3E5	179 aa	Known RBP	10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	OR2T8	A6NH00	312 aa		10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	NR0B2	Q15466	257 aa		10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	EXT1	Q16394	746 aa		10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348		Q6ZPB1	254 aa	Predicted RBP	10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	NEIL2	Q969S2	332 aa		10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	MED17	Q9NVC6	651 aa		10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	NXT1	Q9UKK6	140 aa	Known RBP	10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	MRPS28	Q9Y2Q9	187 aa	Known RBP	10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	PIAS3	Q9Y6X2	628 aa		10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	TRAV36DV7	A0A075B6V5	113 aa		10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	PSMB5	P28074	263 aa		10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	MMP15	P51511	669 aa		10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	SMAD4	Q13485	552 aa	Known RBP	10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	SYT9	Q86SS6	491 aa		10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	VRK2	Q86Y07	508 aa		10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	OR10J5	Q8NHC4	309 aa		10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	SLC30A3	Q99726	388 aa		10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	ZNF337	Q9Y3M9	751 aa		10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	MYADML2	A6NDP7	307 aa		10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	ZNF732	B4DXR9	585 aa		10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348		H7C1C5	153 aa		10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	SMAD6	O43541	496 aa	Known RBP	10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	NRAS	P01111	189 aa		10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	HRAS	P01112	189 aa		10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	KRAS	P01116	189 aa		10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	CDC20	Q12834	499 aa		10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	SLC22A24	Q8N4F4	322 aa		10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	ZNF300	Q96RE9	604 aa	Predicted RBP	10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	CNTD2	Q9H8S5	307 aa		10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348		A0A1W2PPH5	198 aa		10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	TNFRSF10C	O14798	259 aa		10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	PCBD1	P61457	104 aa		10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	DSC1	Q08554	894 aa		10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	RUNX3	Q13761	415 aa		10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	OR8G1	Q15617	311 aa		10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	C1QTNF12	Q5T7M4	302 aa		10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	COPS9	Q8WXC6	57 aa		10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	SNX22	Q96L94	193 aa		10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	ZMAT3	Q9HA38	289 aa	Known RBP	10.42	□□□□□ -0.74
SRSF4-208	ENST00000634348	hCG_1809904	A0A1W2PP81	198 aa		10.41	□□□□□ -0.74
SRSF4-208	ENST00000634348		A0A1W2PPE2	198 aa		10.41	□□□□□ -0.74
SRSF4-208	ENST00000634348		A0A1W2PR64	198 aa		10.41	□□□□□ -0.74
SRSF4-208	ENST00000634348		A0A1W2PRV1	198 aa		10.41	□□□□□ -0.74
SRSF4-208	ENST00000634348	MAN2B1	O00754	1011 aa		10.41	□□□□□ -0.74
SRSF4-208	ENST00000634348	SNRNP200	O75643	2136 aa	Known RBP	10.41	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 43 ms