RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 ARMCX4Q5H9R4 360 aa15.57■□□□□ 0.08
PTCHD3-202ENST00000622555 ELFN2Q5R3F8 820 aa15.57■□□□□ 0.08
PTCHD3-202ENST00000622555 LIPNQ5VXI9 398 aa15.57■□□□□ 0.08
PTCHD3-202ENST00000622555 ZNF774Q6NX45 483 aa15.57■□□□□ 0.08
PTCHD3-202ENST00000622555 DPPA2Q7Z7J5 298 aa15.57■□□□□ 0.08
PTCHD3-202ENST00000622555 AKR7LQ8NHP1 331 aa15.57■□□□□ 0.08
PTCHD3-202ENST00000622555 CCDC120Q96HB5 630 aa15.57■□□□□ 0.08
PTCHD3-202ENST00000622555 OPALINQ96PE5 141 aa15.57■□□□□ 0.08
PTCHD3-202ENST00000622555 COQ3Q9NZJ6 369 aa15.57■□□□□ 0.08
PTCHD3-202ENST00000622555 JKAMPQ9P055 326 aa15.57■□□□□ 0.08
PTCHD3-202ENST00000622555 ZNF503-AS2A6NEH8 195 aa15.56■□□□□ 0.08
PTCHD3-202ENST00000622555 E9PI62 339 aa15.56■□□□□ 0.08
PTCHD3-202ENST00000622555 ZNF254O75437 659 aa15.56■□□□□ 0.08
PTCHD3-202ENST00000622555 UBL3O95164 117 aa15.56■□□□□ 0.08
PTCHD3-202ENST00000622555 IL32P24001 234 aa15.56■□□□□ 0.08
PTCHD3-202ENST00000622555 CHRNB4P30926 498 aa15.56■□□□□ 0.08
PTCHD3-202ENST00000622555 PSMB10P40306 273 aa15.56■□□□□ 0.08
PTCHD3-202ENST00000622555 PSG4Q00888 419 aa15.56■□□□□ 0.08
PTCHD3-202ENST00000622555 MLLT11Q13015 90 aaPredicted RBP15.56■□□□□ 0.08
PTCHD3-202ENST00000622555 TMEM53Q6P2H8 277 aa15.56■□□□□ 0.08
PTCHD3-202ENST00000622555 DEGS2Q6QHC5 323 aa15.56■□□□□ 0.08
PTCHD3-202ENST00000622555 STAC2Q6ZMT1 411 aa15.56■□□□□ 0.08
PTCHD3-202ENST00000622555 EGFL6Q8IUX8 553 aa15.56■□□□□ 0.08
PTCHD3-202ENST00000622555 CCDC36Q8IYA8 594 aa15.56■□□□□ 0.08
PTCHD3-202ENST00000622555 ZFP41Q8N8Y5 198 aa15.56■□□□□ 0.08
PTCHD3-202ENST00000622555 ATF6BQ99941 703 aa15.56■□□□□ 0.08
PTCHD3-202ENST00000622555 WNT5BQ9H1J7 359 aa15.56■□□□□ 0.08
PTCHD3-202ENST00000622555 GRIP1Q9Y3R0 1128 aa15.56■□□□□ 0.08
PTCHD3-202ENST00000622555 RTTNQ86VV8 2226 aa15.56■□□□□ 0.08
PTCHD3-202ENST00000622555 PNMA8CA0A1B0GUJ8 204 aa15.55■□□□□ 0.08
PTCHD3-202ENST00000622555 A0A1W2PR80 420 aa15.55■□□□□ 0.08
PTCHD3-202ENST00000622555 SLC22A1O15245 554 aa15.55■□□□□ 0.08
PTCHD3-202ENST00000622555 HSD11B1P28845 292 aa15.55■□□□□ 0.08
PTCHD3-202ENST00000622555 ARR3P36575 388 aa15.55■□□□□ 0.08
PTCHD3-202ENST00000622555 ACSM1Q08AH1 577 aa15.55■□□□□ 0.08
PTCHD3-202ENST00000622555 TSTQ16762 297 aaKnown RBP15.55■□□□□ 0.08
PTCHD3-202ENST00000622555 C4orf17Q53FE4 359 aa15.55■□□□□ 0.08
PTCHD3-202ENST00000622555 PABPC1L2AQ5JQF8 200 aa15.55■□□□□ 0.08
PTCHD3-202ENST00000622555 RHOUQ7L0Q8 258 aa15.55■□□□□ 0.08
PTCHD3-202ENST00000622555 P2RY8Q86VZ1 359 aa15.55■□□□□ 0.08
PTCHD3-202ENST00000622555 HDHD2Q9H0R4 259 aa15.55■□□□□ 0.08
PTCHD3-202ENST00000622555 NOX3Q9HBY0 568 aa15.55■□□□□ 0.08
PTCHD3-202ENST00000622555 ISYNA1Q9NPH2 558 aa15.55■□□□□ 0.08
PTCHD3-202ENST00000622555 SLC17A5Q9NRA2 495 aa15.55■□□□□ 0.08
PTCHD3-202ENST00000622555 DDX28Q9NUL7 540 aaKnown RBP15.55■□□□□ 0.08
PTCHD3-202ENST00000622555 ELOVL5Q9NYP7 299 aa15.55■□□□□ 0.08
PTCHD3-202ENST00000622555 ERRFI1Q9UJM3 462 aaPredicted RBP15.55■□□□□ 0.08
PTCHD3-202ENST00000622555 FBXL3Q9UKT7 428 aa15.55■□□□□ 0.08
PTCHD3-202ENST00000622555 HOXB1P14653 301 aaPredicted RBP15.54■□□□□ 0.08
PTCHD3-202ENST00000622555 PSMB1P20618 241 aaKnown RBP15.54■□□□□ 0.08
PTCHD3-202ENST00000622555 TAS2R43P59537 309 aa15.54■□□□□ 0.08
PTCHD3-202ENST00000622555 RAB1AP62820 205 aa15.54■□□□□ 0.08
PTCHD3-202ENST00000622555 GRB2P62993 217 aaKnown RBP15.54■□□□□ 0.08
PTCHD3-202ENST00000622555 BDH1Q02338 343 aa15.54■□□□□ 0.08
PTCHD3-202ENST00000622555 GSG1Q2KHT4 349 aa15.54■□□□□ 0.08
PTCHD3-202ENST00000622555 MTFR2Q6P444 385 aa15.54■□□□□ 0.08
PTCHD3-202ENST00000622555 C17orf78Q8N4C9 275 aa15.54■□□□□ 0.08
PTCHD3-202ENST00000622555 OR1F12Q8NHA8 337 aa15.54■□□□□ 0.08
PTCHD3-202ENST00000622555 ASB5Q8WWX0 329 aa15.54■□□□□ 0.08
PTCHD3-202ENST00000622555 UFD1Q92890 307 aa15.54■□□□□ 0.08
PTCHD3-202ENST00000622555 BOD1Q96IK1 185 aa15.54■□□□□ 0.08
PTCHD3-202ENST00000622555 HDHD5Q9BXW7 423 aa15.54■□□□□ 0.08
PTCHD3-202ENST00000622555 ARPC4-TTLL3A0A0A6YYG9 625 aa15.54■□□□□ 0.08
PTCHD3-202ENST00000622555 SYNGR3O43761 229 aa15.54■□□□□ 0.08
PTCHD3-202ENST00000622555 LIPAP38571 399 aa15.54■□□□□ 0.08
PTCHD3-202ENST00000622555 HTR5AP47898 357 aa15.54■□□□□ 0.08
PTCHD3-202ENST00000622555 GALK2Q01415 458 aa15.54■□□□□ 0.08
PTCHD3-202ENST00000622555 FAM27E3Q08E93 113 aa15.54■□□□□ 0.08
PTCHD3-202ENST00000622555 MRPL28Q13084 256 aaKnown RBP15.54■□□□□ 0.08
PTCHD3-202ENST00000622555 DCTN2Q13561 401 aaKnown RBP15.54■□□□□ 0.08
PTCHD3-202ENST00000622555 SLC25A35Q3KQZ1 300 aa15.54■□□□□ 0.08
PTCHD3-202ENST00000622555 LIPKQ5VXJ0 399 aa15.54■□□□□ 0.08
PTCHD3-202ENST00000622555 MDP1Q86V88 176 aa15.54■□□□□ 0.08
PTCHD3-202ENST00000622555 HAVCR2Q8TDQ0 301 aa15.54■□□□□ 0.08
PTCHD3-202ENST00000622555 B3GNT2Q9NY97 397 aa15.54■□□□□ 0.08
PTCHD3-202ENST00000622555 OR6C6A6NF89 314 aa15.53■□□□□ 0.08
PTCHD3-202ENST00000622555 FAM90A27PA6NNH2 459 aa15.53■□□□□ 0.08
PTCHD3-202ENST00000622555 CD36P16671 472 aa15.53■□□□□ 0.08
PTCHD3-202ENST00000622555 CELP19835 753 aa15.53■□□□□ 0.08
PTCHD3-202ENST00000622555 PRKXP51817 358 aa15.53■□□□□ 0.08
PTCHD3-202ENST00000622555 ECH1Q13011 328 aa15.53■□□□□ 0.08
PTCHD3-202ENST00000622555 MOGQ16653 247 aa15.53■□□□□ 0.08
PTCHD3-202ENST00000622555 ZNF829Q3KNS6 432 aaPredicted RBP15.53■□□□□ 0.08
PTCHD3-202ENST00000622555 LINC00299Q6ZSB3 139 aa15.53■□□□□ 0.08
PTCHD3-202ENST00000622555 WDR31Q8NA23 367 aa15.53■□□□□ 0.08
PTCHD3-202ENST00000622555 HSD17B8Q92506 261 aa15.53■□□□□ 0.08
PTCHD3-202ENST00000622555 SLC7A6Q92536 515 aa15.53■□□□□ 0.08
PTCHD3-202ENST00000622555 S100PBPQ96BU1 408 aa15.53■□□□□ 0.08
PTCHD3-202ENST00000622555 COQ7Q99807 217 aa15.53■□□□□ 0.08
PTCHD3-202ENST00000622555 NIPAL2Q9H841 368 aa15.53■□□□□ 0.08
PTCHD3-202ENST00000622555 ST6GALNAC2Q9UJ37 374 aa15.53■□□□□ 0.08
PTCHD3-202ENST00000622555 GTF2A1LQ9UNN4 478 aa15.53■□□□□ 0.08
PTCHD3-202ENST00000622555 SIRT4Q9Y6E7 314 aaPredicted RBP15.53■□□□□ 0.08
PTCHD3-202ENST00000622555 SMG1Q96Q15 3661 aaKnown RBP15.53■□□□□ 0.08
PTCHD3-202ENST00000622555 OR5H1A6NKK0 313 aa15.52■□□□□ 0.08
PTCHD3-202ENST00000622555 CPEP16870 476 aa15.52■□□□□ 0.08
PTCHD3-202ENST00000622555 NR4A1P22736 598 aa15.52■□□□□ 0.08
PTCHD3-202ENST00000622555 TGM4P49221 684 aa15.52■□□□□ 0.08
PTCHD3-202ENST00000622555 RGS6P49758 472 aa15.52■□□□□ 0.08
PTCHD3-202ENST00000622555 ASCL1P50553 236 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms