RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 DOC2BQ14184 412 aa13.81□□□□□ -0.2
COL5A1-208ENST00000618395 GLDNQ6ZMI3 551 aaPredicted RBP13.81□□□□□ -0.2
COL5A1-208ENST00000618395 LINC00862A6NCI5 91 aa13.81□□□□□ -0.2
COL5A1-208ENST00000618395 HAND1O96004 215 aa13.81□□□□□ -0.2
COL5A1-208ENST00000618395 AREGP15514 252 aa13.81□□□□□ -0.2
COL5A1-208ENST00000618395 HRH1P35367 487 aa13.81□□□□□ -0.2
COL5A1-208ENST00000618395 TMEM267Q0VDI3 215 aaPredicted RBP13.81□□□□□ -0.2
COL5A1-208ENST00000618395 TMEM201Q5SNT2 666 aa13.81□□□□□ -0.2
COL5A1-208ENST00000618395 FAM163AQ96GL9 167 aaPredicted RBP13.81□□□□□ -0.2
COL5A1-208ENST00000618395 MBOAT2Q6ZWT7 520 aa13.81□□□□□ -0.2
COL5A1-208ENST00000618395 COL25A1Q9BXS0 654 aaPredicted RBP13.81□□□□□ -0.2
COL5A1-208ENST00000618395 LANCL2Q9NS86 450 aa13.81□□□□□ -0.2
COL5A1-208ENST00000618395 GNG12Q9UBI6 72 aa13.81□□□□□ -0.2
COL5A1-208ENST00000618395 TRAPPC4Q9Y296 219 aa13.81□□□□□ -0.2
COL5A1-208ENST00000618395 PHRF1Q9P1Y6 1649 aaKnown RBP13.81□□□□□ -0.2
COL5A1-208ENST00000618395 A0A1W2PN81 502 aa13.81□□□□□ -0.2
COL5A1-208ENST00000618395 SOWAHBA6NEL2 793 aa13.81□□□□□ -0.2
COL5A1-208ENST00000618395 CHRNA7P36544 502 aa13.81□□□□□ -0.2
COL5A1-208ENST00000618395 TBX15Q96SF7 602 aa13.81□□□□□ -0.2
COL5A1-208ENST00000618395 GABARAPL1Q9H0R8 117 aa13.81□□□□□ -0.2
COL5A1-208ENST00000618395 CACFD1Q9UGQ2 172 aa13.81□□□□□ -0.2
COL5A1-208ENST00000618395 Q6ZVU0 165 aa13.8□□□□□ -0.2
COL5A1-208ENST00000618395 KMT5CQ86Y97 462 aa13.8□□□□□ -0.2
COL5A1-208ENST00000618395 OR4S1Q8NGB4 309 aa13.8□□□□□ -0.2
COL5A1-208ENST00000618395 C5AR2Q9P296 337 aa13.8□□□□□ -0.2
COL5A1-208ENST00000618395 CTSAP10619 480 aa13.8□□□□□ -0.2
COL5A1-208ENST00000618395 YOD1Q5VVQ6 348 aaPredicted RBP13.8□□□□□ -0.2
COL5A1-208ENST00000618395 REC114Q7Z4M0 266 aa13.8□□□□□ -0.2
COL5A1-208ENST00000618395 HGDQ93099 445 aa13.8□□□□□ -0.2
COL5A1-208ENST00000618395 SLC6A18Q96N87 628 aa13.8□□□□□ -0.2
COL5A1-208ENST00000618395 SLAMF8Q9P0V8 285 aa13.8□□□□□ -0.2
COL5A1-208ENST00000618395 FAM208AQ9UK61 1670 aaKnown RBP13.8□□□□□ -0.2
COL5A1-208ENST00000618395 RRP8O43159 456 aaKnown RBP13.8□□□□□ -0.2
COL5A1-208ENST00000618395 PRRT3Q5FWE3 981 aa13.8□□□□□ -0.2
COL5A1-208ENST00000618395 NLGN4XQ8N0W4 816 aa13.8□□□□□ -0.2
COL5A1-208ENST00000618395 NLGN4YQ8NFZ3 816 aaPredicted RBP13.8□□□□□ -0.2
COL5A1-208ENST00000618395 ISOC2Q96AB3 205 aa13.8□□□□□ -0.2
COL5A1-208ENST00000618395 MON2Q7Z3U7 1717 aa13.8□□□□□ -0.2
COL5A1-208ENST00000618395 DIP2BQ9P265 1576 aa13.8□□□□□ -0.2
COL5A1-208ENST00000618395 DIRC3C9JPN6 131 aa13.8□□□□□ -0.2
COL5A1-208ENST00000618395 GFRA2O00451 464 aa13.8□□□□□ -0.2
COL5A1-208ENST00000618395 CISD2Q8N5K1 135 aaKnown RBP13.8□□□□□ -0.2
COL5A1-208ENST00000618395 PINX1Q96BK5 328 aaKnown RBP13.8□□□□□ -0.2
COL5A1-208ENST00000618395 YIPF6Q96EC8 236 aa13.8□□□□□ -0.2
COL5A1-208ENST00000618395 UQCR10Q9UDW1 63 aa13.8□□□□□ -0.2
COL5A1-208ENST00000618395 RAG2P55895 527 aa13.8□□□□□ -0.2
COL5A1-208ENST00000618395 PHF19Q5T6S3 580 aa13.8□□□□□ -0.2
COL5A1-208ENST00000618395 RTN4IP1Q8WWV3 396 aaPredicted RBP13.8□□□□□ -0.2
COL5A1-208ENST00000618395 KCNK15Q9H427 330 aa13.8□□□□□ -0.2
COL5A1-208ENST00000618395 TMEM210A6NLX4 147 aa13.8□□□□□ -0.2
COL5A1-208ENST00000618395 G3V3Y1 287 aa13.8□□□□□ -0.2
COL5A1-208ENST00000618395 NID1P14543 1247 aa13.8□□□□□ -0.2
COL5A1-208ENST00000618395 IVDP26440 423 aa13.8□□□□□ -0.2
COL5A1-208ENST00000618395 FAM182AQ5T1J6 154 aa13.8□□□□□ -0.2
COL5A1-208ENST00000618395 OR52B4Q8NGK2 314 aa13.8□□□□□ -0.2
COL5A1-208ENST00000618395 TBX18O95935 607 aa13.8□□□□□ -0.2
COL5A1-208ENST00000618395 CTXN2P0C2S0 81 aa13.8□□□□□ -0.2
COL5A1-208ENST00000618395 YIPF1Q9Y548 306 aa13.8□□□□□ -0.2
COL5A1-208ENST00000618395 H3BML4 177 aa13.79□□□□□ -0.2
COL5A1-208ENST00000618395 CA2P00918 260 aa13.79□□□□□ -0.2
COL5A1-208ENST00000618395 ELAVL4P26378 380 aaKnown RBP13.79□□□□□ -0.2
COL5A1-208ENST00000618395 TAS1R3Q7RTX0 852 aa13.79□□□□□ -0.2
COL5A1-208ENST00000618395 TGIF2LXQ8IUE1 241 aa13.79□□□□□ -0.2
COL5A1-208ENST00000618395 PTP4A1Q93096 173 aa13.79□□□□□ -0.2
COL5A1-208ENST00000618395 OR4C12Q96R67 309 aa13.79□□□□□ -0.2
COL5A1-208ENST00000618395 METTL27Q8N6F8 245 aaPredicted RBP13.79□□□□□ -0.2
COL5A1-208ENST00000618395 RPA2P15927 270 aa13.79□□□□□ -0.2
COL5A1-208ENST00000618395 ERVS71-1P61550 626 aa13.79□□□□□ -0.2
COL5A1-208ENST00000618395 SAPCD1Q5SSQ6 148 aa13.79□□□□□ -0.2
COL5A1-208ENST00000618395 CHST2Q9Y4C5 530 aa13.79□□□□□ -0.2
COL5A1-208ENST00000618395 TCRBV16S1A1N1A0A5B0 115 aa13.79□□□□□ -0.2
COL5A1-208ENST00000618395 CDK2AP1O14519 115 aa13.79□□□□□ -0.2
COL5A1-208ENST00000618395 ARPC3O15145 178 aa13.79□□□□□ -0.2
COL5A1-208ENST00000618395 VEGFDO43915 354 aa13.79□□□□□ -0.2
COL5A1-208ENST00000618395 SAMD13Q5VXD3 122 aa13.79□□□□□ -0.2
COL5A1-208ENST00000618395 RIMS4Q9H426 269 aaPredicted RBP13.79□□□□□ -0.2
COL5A1-208ENST00000618395 NAGKQ9UJ70 344 aa13.79□□□□□ -0.2
COL5A1-208ENST00000618395 MTCL1Q9Y4B5 1905 aaKnown RBP13.79□□□□□ -0.2
COL5A1-208ENST00000618395 SIX1Q15475 284 aaPredicted RBP13.79□□□□□ -0.2
COL5A1-208ENST00000618395 PRICKLE2Q7Z3G6 844 aa13.79□□□□□ -0.2
COL5A1-208ENST00000618395 NPY6RQ99463 290 aa13.79□□□□□ -0.2
COL5A1-208ENST00000618395 OPN3Q9H1Y3 402 aaPredicted RBP13.79□□□□□ -0.2
COL5A1-208ENST00000618395 SPATA31A5Q5VU36 1347 aa13.79□□□□□ -0.2
COL5A1-208ENST00000618395 SPATA31A7Q8IWB4 1347 aa13.79□□□□□ -0.2
COL5A1-208ENST00000618395 FAM155AB1AL88 458 aaPredicted RBP13.79□□□□□ -0.2
COL5A1-208ENST00000618395 ACOT8O14734 319 aa13.79□□□□□ -0.2
COL5A1-208ENST00000618395 GABREP78334 506 aa13.79□□□□□ -0.2
COL5A1-208ENST00000618395 SPICQ8N5J4 248 aa13.79□□□□□ -0.2
COL5A1-208ENST00000618395 HRASLS2Q9NWW9 162 aa13.79□□□□□ -0.2
COL5A1-208ENST00000618395 LIPGQ9Y5X9 500 aa13.79□□□□□ -0.2
COL5A1-208ENST00000618395 HTR1DP28221 377 aa13.79□□□□□ -0.2
COL5A1-208ENST00000618395 CDC20BQ86Y33 519 aa13.79□□□□□ -0.2
COL5A1-208ENST00000618395 DMRT3Q9NQL9 472 aa13.79□□□□□ -0.2
COL5A1-208ENST00000618395 DLL4Q9NR61 685 aa13.79□□□□□ -0.2
COL5A1-208ENST00000618395 DOPEY2Q9Y3R5 2298 aa13.78□□□□□ -0.2
COL5A1-208ENST00000618395 PLSCR5A0PG75 271 aa13.78□□□□□ -0.2
COL5A1-208ENST00000618395 LMX1BO60663 402 aa13.78□□□□□ -0.2
COL5A1-208ENST00000618395 PRAMEF4O60810 478 aa13.78□□□□□ -0.2
COL5A1-208ENST00000618395 MYO16Q9Y6X6 1858 aa13.78□□□□□ -0.2
COL5A1-208ENST00000618395 TSPAN13O95857 204 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms