RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 UGT2A1Q9Y4X1 527 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 FLVCR1Q9Y5Y0 555 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 KIAA1549Q9HCM3 1950 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 CHD8Q9HCK8 2581 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 ZNF716A6NP11 495 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 CENPBD1B2RD01 187 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 KALRNO60229 2985 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 ZNF432O94892 652 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 TMIGD3P0DMS9 266 aaPredicted RBP6.88□□□□□ -1.31
NEK3-207ENST00000617054 CD53P19397 219 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 LHX2P50458 406 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 FOXG1P55316 489 aaPredicted RBP6.88□□□□□ -1.31
NEK3-207ENST00000617054 ZNF766Q5HY98 468 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 ALKBH2Q6NS38 261 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 ASB18Q6ZVZ8 466 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 RNF144BQ7Z419 303 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 CATSPERDQ86XM0 798 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 TMEM123Q8N131 208 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 GPR148Q8TDV2 347 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 ASB5Q8WWX0 329 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 ASB17Q8WXJ9 295 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 WDFY2Q96P53 400 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 ABHD1Q96SE0 405 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 ULBP2Q9BZM5 246 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 C1orf198Q9H425 327 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 LDAHQ9H6V9 325 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 EXO5Q9H790 373 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 CALHM2Q9HA72 323 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 PRR14LQ5THK1 2151 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 MYO7BQ6PIF6 2116 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 NPIPB13A6NJU9 1138 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 TMEM212A6NML5 194 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 NOTOA8MTQ0 251 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 NPIPB4C9JG80 1138 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 TFECO14948 347 aaPredicted RBP6.88□□□□□ -1.31
NEK3-207ENST00000617054 GPRIN2O60269 458 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 FZD7O75084 574 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 GATBO75879 557 aaKnown RBP6.88□□□□□ -1.31
NEK3-207ENST00000617054 B4GALT1P15291 398 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 SRP9P49458 86 aaKnown RBP6.88□□□□□ -1.31
NEK3-207ENST00000617054 AGFG1P52594 562 aaKnown RBP6.88□□□□□ -1.31
NEK3-207ENST00000617054 BLVRAP53004 296 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 PPP3R1P63098 170 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 SPOCK1Q08629 439 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 TAF13Q15543 124 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 ZNF181Q2M3W8 571 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 ARSJQ5FYB0 599 aaPredicted RBP6.88□□□□□ -1.31
NEK3-207ENST00000617054 FAM209AQ5JX71 171 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 MZT2AQ6P582 158 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 LUZP2Q86TE4 346 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 COMMD2Q86X83 199 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 TUSC5Q8IXB3 177 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 ADPRHL1Q8NDY3 354 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 MDS2Q8NDY4 140 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 OR51E1Q8TCB6 317 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 RNF133Q8WVZ7 376 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 SPACA5Q96QH8 159 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 MMP28Q9H239 520 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 PPP1R3EQ9H7J1 279 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 DDX28Q9NUL7 540 aaKnown RBP6.88□□□□□ -1.31
NEK3-207ENST00000617054 LUZP4Q9P127 313 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 KCNMB2Q9Y691 235 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 TRAV1-2A0A0B4J238 106 aa6.87□□□□□ -1.31
NEK3-207ENST00000617054 GJE1A6NN92 205 aa6.87□□□□□ -1.31
NEK3-207ENST00000617054 IFITM5A6NNB3 132 aa6.87□□□□□ -1.31
NEK3-207ENST00000617054 PHYHO14832 338 aa6.87□□□□□ -1.31
NEK3-207ENST00000617054 TLX3O43711 291 aaPredicted RBP6.87□□□□□ -1.31
NEK3-207ENST00000617054 SRSF10O75494 262 aaKnown RBP6.87□□□□□ -1.31
NEK3-207ENST00000617054 FKBP2P26885 142 aaKnown RBP6.87□□□□□ -1.31
NEK3-207ENST00000617054 HSD11B1P28845 292 aa6.87□□□□□ -1.31
NEK3-207ENST00000617054 CLDN18P56856 261 aa6.87□□□□□ -1.31
NEK3-207ENST00000617054 CLN3Q13286 438 aa6.87□□□□□ -1.31
NEK3-207ENST00000617054 ZNF239Q16600 458 aaKnown RBP6.87□□□□□ -1.31
NEK3-207ENST00000617054 PCK2Q16822 640 aa6.87□□□□□ -1.31
NEK3-207ENST00000617054 TPRA1Q86W33 373 aa6.87□□□□□ -1.31
NEK3-207ENST00000617054 FGFBP3Q8TAT2 258 aa6.87□□□□□ -1.31
NEK3-207ENST00000617054 KCNE4Q8WWG9 221 aa6.87□□□□□ -1.31
NEK3-207ENST00000617054 FBXO17Q96EF6 278 aa6.87□□□□□ -1.31
NEK3-207ENST00000617054 TAS2R4Q9NYW5 299 aa6.87□□□□□ -1.31
NEK3-207ENST00000617054 CGGBP1Q9UFW8 167 aaPredicted RBP6.87□□□□□ -1.31
NEK3-207ENST00000617054 DHDHQ9UQ10 334 aa6.87□□□□□ -1.31
NEK3-207ENST00000617054 R4GMQ9 66 aa6.87□□□□□ -1.31
NEK3-207ENST00000617054 V9GY05 133 aa6.87□□□□□ -1.31
NEK3-207ENST00000617054 TRBV5-5A0A0J9YX44 114 aa6.87□□□□□ -1.31
NEK3-207ENST00000617054 LOC107986453A0A1B0GWG9 222 aa6.87□□□□□ -1.31
NEK3-207ENST00000617054 FUOMA2VDF0 154 aa6.87□□□□□ -1.31
NEK3-207ENST00000617054 ANXA2P2A6NMY6 339 aa6.87□□□□□ -1.31
NEK3-207ENST00000617054 GPR171O14626 319 aa6.87□□□□□ -1.31
NEK3-207ENST00000617054 NME2P1O60361 137 aa6.87□□□□□ -1.31
NEK3-207ENST00000617054 SLC43A1O75387 559 aa6.87□□□□□ -1.31
NEK3-207ENST00000617054 ZNF254O75437 659 aa6.87□□□□□ -1.31
NEK3-207ENST00000617054 ANXA2P07355 339 aaKnown RBP6.87□□□□□ -1.31
NEK3-207ENST00000617054 NME2P22392 152 aa6.87□□□□□ -1.31
NEK3-207ENST00000617054 GUCA1AP43080 201 aaPredicted RBP6.87□□□□□ -1.31
NEK3-207ENST00000617054 FAM205BPQ63HN1 556 aa6.87□□□□□ -1.31
NEK3-207ENST00000617054 XKRXQ6PP77 449 aa6.87□□□□□ -1.31
NEK3-207ENST00000617054 CCBE1Q6UXH8 406 aaPredicted RBP6.87□□□□□ -1.31
NEK3-207ENST00000617054 AAED1Q7RTV5 226 aa6.87□□□□□ -1.31
NEK3-207ENST00000617054 LRRTM1Q86UE6 522 aa6.87□□□□□ -1.31
NEK3-207ENST00000617054 TEX19Q8NA77 164 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms