RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 SMAD6O43541 496 aaKnown RBP8.53□□□□□ -1.04
COL12A1-211ENST00000615798 EDN1P05305 212 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 TACR1P25103 407 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 ZNF91Q05481 1191 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 HENMT1Q5T8I9 393 aaKnown RBP8.53□□□□□ -1.04
COL12A1-211ENST00000615798 TUSC5Q8IXB3 177 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 OR2T10Q8NGZ9 312 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 ISG20Q96AZ6 181 aaKnown RBP8.53□□□□□ -1.04
COL12A1-211ENST00000615798 SNX22Q96L94 193 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 CLSTN3Q9BQT9 956 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 TRAF4Q9BUZ4 470 aaPredicted RBP8.53□□□□□ -1.04
COL12A1-211ENST00000615798 VEGFDO43915 354 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 ZNF415Q09FC8 603 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 RAET1LQ5VY80 246 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 DEFB132Q7Z7B7 95 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 TMEM101Q96IK0 257 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 GABRQQ9UN88 632 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 LOC100289279A0A1B0GTE1 492 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 SLC35A1P78382 337 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 GGTA1PQ4G0N0 100 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 OR5M10Q6IEU7 315 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 FAM71E1Q6IPT2 247 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 AGTRAPQ6RW13 159 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 DEFB128Q7Z7B8 93 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 TMEM233B4DJY2 109 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 CLDN34H7C241 214 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 NRP1O14786 923 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 LRRTM4Q86VH4 590 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 THOC6Q86W42 341 aaKnown RBP8.53□□□□□ -1.04
COL12A1-211ENST00000615798 PTRH1Q86Y79 214 aaKnown RBP8.53□□□□□ -1.04
COL12A1-211ENST00000615798 PHYHIPQ92561 330 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 GPR32O75388 356 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 PRSS1P07477 247 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 SPATA45Q537H7 98 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 RTN4IP1Q8WWV3 396 aaPredicted RBP8.53□□□□□ -1.04
COL12A1-211ENST00000615798 MYADMQ96S97 322 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 RCC2Q9P258 522 aaKnown RBP8.53□□□□□ -1.04
COL12A1-211ENST00000615798 CORTO00230 105 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 CPNE6O95741 557 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 OR4E1P0C645 316 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 GNG4P50150 75 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 MNX1P50219 401 aaPredicted RBP8.53□□□□□ -1.04
COL12A1-211ENST00000615798 WDR5P61964 334 aaKnown RBP8.53□□□□□ -1.04
COL12A1-211ENST00000615798 TMIGD1Q6UXZ0 262 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 GDPD3Q7L5L3 318 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 CLEC1AQ8NC01 280 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 LRRC29Q8WV35 223 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 DDIT4LQ96D03 193 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 OR2T8A6NH00 312 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 DHRS3O75911 302 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 MED13LQ71F56 2210 aa8.53□□□□□ -1.04
COL12A1-211ENST00000615798 LCN15Q6UWW0 184 aa8.52□□□□□ -1.04
COL12A1-211ENST00000615798 BTNL2Q9UIR0 455 aa8.52□□□□□ -1.04
COL12A1-211ENST00000615798 POMT2Q9UKY4 750 aa8.52□□□□□ -1.04
COL12A1-211ENST00000615798 HOXC13P31276 330 aa8.52□□□□□ -1.04
COL12A1-211ENST00000615798 RPL34P49207 117 aaKnown RBP8.52□□□□□ -1.04
COL12A1-211ENST00000615798 H2BFWTQ7Z2G1 175 aa8.52□□□□□ -1.04
COL12A1-211ENST00000615798 TMEM102Q8N9M5 508 aaPredicted RBP8.52□□□□□ -1.04
COL12A1-211ENST00000615798 NUS1Q96E22 293 aa8.52□□□□□ -1.04
COL12A1-211ENST00000615798 MRPL42Q9Y6G3 142 aaKnown RBP8.52□□□□□ -1.04
COL12A1-211ENST00000615798 PPP1R3DO95685 299 aa8.52□□□□□ -1.05
COL12A1-211ENST00000615798 ATP1B3P54709 279 aa8.52□□□□□ -1.05
COL12A1-211ENST00000615798 ILKQ13418 452 aa8.52□□□□□ -1.05
COL12A1-211ENST00000615798 MLF2Q15773 248 aaPredicted RBP8.52□□□□□ -1.05
COL12A1-211ENST00000615798 PLK5Q496M5 336 aa8.52□□□□□ -1.05
COL12A1-211ENST00000615798 GRASPQ7Z6J2 395 aaPredicted RBP8.52□□□□□ -1.05
COL12A1-211ENST00000615798 PDZD3Q86UT5 571 aa8.52□□□□□ -1.05
COL12A1-211ENST00000615798 OR8B3Q8NGG8 313 aa8.52□□□□□ -1.05
COL12A1-211ENST00000615798 MAFAQ8NHW3 353 aaPredicted RBP8.52□□□□□ -1.05
COL12A1-211ENST00000615798 NSUN3Q9H649 340 aaKnown RBP8.52□□□□□ -1.05
COL12A1-211ENST00000615798 B4GALT7Q9UBV7 327 aa8.52□□□□□ -1.05
COL12A1-211ENST00000615798 DMRT1Q9Y5R6 373 aa8.52□□□□□ -1.05
COL12A1-211ENST00000615798 PRKRAO75569 313 aaKnown RBP8.52□□□□□ -1.05
COL12A1-211ENST00000615798 SLURP2P0DP57 97 aa8.52□□□□□ -1.05
COL12A1-211ENST00000615798 SLC35E4Q6ICL7 350 aa8.52□□□□□ -1.05
COL12A1-211ENST00000615798 TMEM43Q9BTV4 400 aa8.52□□□□□ -1.05
COL12A1-211ENST00000615798 GNB4Q9HAV0 340 aa8.52□□□□□ -1.05
COL12A1-211ENST00000615798 IGSF5Q9NSI5 407 aa8.52□□□□□ -1.05
COL12A1-211ENST00000615798 BOKQ9UMX3 212 aaPredicted RBP8.52□□□□□ -1.05
COL12A1-211ENST00000615798 COL24A1Q17RW2 1714 aa8.52□□□□□ -1.05
COL12A1-211ENST00000615798 TMEM262E9PQX1 116 aa8.52□□□□□ -1.05
COL12A1-211ENST00000615798 SOD2P04179 222 aa8.52□□□□□ -1.05
COL12A1-211ENST00000615798 HIST1H1TP22492 207 aaPredicted RBP8.52□□□□□ -1.05
COL12A1-211ENST00000615798 PARM1Q6UWI2 310 aa8.52□□□□□ -1.05
COL12A1-211ENST00000615798 LURAP1LQ8IV03 231 aa8.52□□□□□ -1.05
COL12A1-211ENST00000615798 OR8A1Q8NGG7 326 aa8.52□□□□□ -1.05
COL12A1-211ENST00000615798 ADAMTS18Q8TE60 1221 aa8.52□□□□□ -1.05
COL12A1-211ENST00000615798 ADTRPQ96IZ2 230 aa8.52□□□□□ -1.05
COL12A1-211ENST00000615798 ANGPTL4Q9BY76 406 aa8.52□□□□□ -1.05
COL12A1-211ENST00000615798 ZNF430Q9H8G1 570 aaPredicted RBP8.52□□□□□ -1.05
COL12A1-211ENST00000615798 OR52A1Q9UKL2 312 aa8.52□□□□□ -1.05
COL12A1-211ENST00000615798 TGM5O43548 720 aa8.52□□□□□ -1.05
COL12A1-211ENST00000615798 TIA1P31483 386 aaKnown RBP eCLIP8.52□□□□□ -1.05
COL12A1-211ENST00000615798 CPOQ8IVL8 374 aa8.52□□□□□ -1.05
COL12A1-211ENST00000615798 MZB1Q8WU39 189 aa8.52□□□□□ -1.05
COL12A1-211ENST00000615798 C4orf36Q96KX1 117 aa8.52□□□□□ -1.05
COL12A1-211ENST00000615798 DNAJB11Q9UBS4 358 aa8.52□□□□□ -1.05
COL12A1-211ENST00000615798 C22orf39Q6P5X5 142 aa8.52□□□□□ -1.05
COL12A1-211ENST00000615798 CLEC18BQ6UXF7 455 aa8.52□□□□□ -1.05
COL12A1-211ENST00000615798 TBX15Q96SF7 602 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms