RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 SYT4Q9H2B2 425 aa10.06□□□□□ -0.8
ATF3-211ENST00000613954 UBQLN4Q9NRR5 601 aa10.06□□□□□ -0.8
ATF3-211ENST00000613954 PRODH2Q9UF12 536 aa10.06□□□□□ -0.8
ATF3-211ENST00000613954 KCNG2Q9UJ96 466 aa10.06□□□□□ -0.8
ATF3-211ENST00000613954 FBXO4Q9UKT5 387 aa10.06□□□□□ -0.8
ATF3-211ENST00000613954 HEATR5AQ86XA9 2040 aa10.05□□□□□ -0.8
ATF3-211ENST00000613954 TMEM150CB9EJG8 249 aa10.05□□□□□ -0.8
ATF3-211ENST00000613954 H0YIG0 161 aa10.05□□□□□ -0.8
ATF3-211ENST00000613954 H7C1C5 153 aa10.05□□□□□ -0.8
ATF3-211ENST00000613954 CLDN4O14493 209 aa10.05□□□□□ -0.8
ATF3-211ENST00000613954 CFIP05156 583 aa10.05□□□□□ -0.8
ATF3-211ENST00000613954 IGFBP3P17936 291 aaPredicted RBP10.05□□□□□ -0.8
ATF3-211ENST00000613954 RAB6AP20340 208 aa10.05□□□□□ -0.8
ATF3-211ENST00000613954 ZBTB25P24278 435 aa10.05□□□□□ -0.8
ATF3-211ENST00000613954 BDKRB2P30411 391 aa10.05□□□□□ -0.8
ATF3-211ENST00000613954 LCN6P62502 163 aa10.05□□□□□ -0.8
ATF3-211ENST00000613954 ROM1Q03395 351 aa10.05□□□□□ -0.8
ATF3-211ENST00000613954 EGR4Q05215 589 aa10.05□□□□□ -0.8
ATF3-211ENST00000613954 PMPCAQ10713 525 aa10.05□□□□□ -0.8
ATF3-211ENST00000613954 FUT7Q11130 342 aa10.05□□□□□ -0.8
ATF3-211ENST00000613954 MICBQ29980 383 aa10.05□□□□□ -0.8
ATF3-211ENST00000613954 SCGB2B2Q4G0G5 96 aa10.05□□□□□ -0.8
ATF3-211ENST00000613954 FNDC7Q5VTL7 733 aa10.05□□□□□ -0.8
ATF3-211ENST00000613954 C3orf33Q6P1S2 294 aa10.05□□□□□ -0.8
ATF3-211ENST00000613954 ZNF813Q6ZN06 617 aa10.05□□□□□ -0.8
ATF3-211ENST00000613954 D2HGDHQ8N465 521 aa10.05□□□□□ -0.8
ATF3-211ENST00000613954 DTWD2Q8NBA8 298 aa10.05□□□□□ -0.8
ATF3-211ENST00000613954 PLPP7Q8NBV4 271 aa10.05□□□□□ -0.8
ATF3-211ENST00000613954 OR13C8Q8NGS7 320 aa10.05□□□□□ -0.8
ATF3-211ENST00000613954 C16orf52Q8NHV5 167 aa10.05□□□□□ -0.8
ATF3-211ENST00000613954 MITD1Q8WV92 249 aa10.05□□□□□ -0.8
ATF3-211ENST00000613954 ARL11Q969Q4 196 aa10.05□□□□□ -0.8
ATF3-211ENST00000613954 FOXRED1Q96CU9 486 aaPredicted RBP10.05□□□□□ -0.8
ATF3-211ENST00000613954 MMABQ96EY8 250 aaPredicted RBP10.05□□□□□ -0.8
ATF3-211ENST00000613954 LMF1Q96S06 567 aa10.05□□□□□ -0.8
ATF3-211ENST00000613954 OR10A5Q9H207 317 aa10.05□□□□□ -0.8
ATF3-211ENST00000613954 MBD2Q9UBB5 411 aa10.05□□□□□ -0.8
ATF3-211ENST00000613954 PLEKHA6Q9Y2H5 1048 aa10.05□□□□□ -0.8
ATF3-211ENST00000613954 METTL21EPA6NDL7 271 aa10.04□□□□□ -0.8
ATF3-211ENST00000613954 H3BMH7 237 aa10.04□□□□□ -0.8
ATF3-211ENST00000613954 H3BSH0 61 aa10.04□□□□□ -0.8
ATF3-211ENST00000613954 HRKO00198 91 aa10.04□□□□□ -0.8
ATF3-211ENST00000613954 SULT2B1O00204 365 aa10.04□□□□□ -0.8
ATF3-211ENST00000613954 SCDO00767 359 aa10.04□□□□□ -0.8
ATF3-211ENST00000613954 ALOX12BO75342 701 aa10.04□□□□□ -0.8
ATF3-211ENST00000613954 SLC25A12O75746 678 aa10.04□□□□□ -0.8
ATF3-211ENST00000613954 OR6A2O95222 327 aa10.04□□□□□ -0.8
ATF3-211ENST00000613954 HLA-DQA2P01906 255 aa10.04□□□□□ -0.8
ATF3-211ENST00000613954 TPT1P13693 172 aaKnown RBP10.04□□□□□ -0.8
ATF3-211ENST00000613954 PVALBP20472 110 aaPredicted RBP10.04□□□□□ -0.8
ATF3-211ENST00000613954 CBX5P45973 191 aa10.04□□□□□ -0.8
ATF3-211ENST00000613954 CCR4P51679 360 aa10.04□□□□□ -0.8
ATF3-211ENST00000613954 RIDAP52758 137 aaKnown RBP10.04□□□□□ -0.8
ATF3-211ENST00000613954 NAAAQ02083 359 aa10.04□□□□□ -0.8
ATF3-211ENST00000613954 SKP2Q13309 424 aa10.04□□□□□ -0.8
ATF3-211ENST00000613954 LRRC37A5PQ49AS3 106 aa10.04□□□□□ -0.8
ATF3-211ENST00000613954 RNASE10Q5GAN6 216 aaKnown RBP10.04□□□□□ -0.8
ATF3-211ENST00000613954 GLYATL3Q5SZD4 288 aa10.04□□□□□ -0.8
ATF3-211ENST00000613954 C10orf91Q5T1B1 145 aa10.04□□□□□ -0.8
ATF3-211ENST00000613954 DHRS7BQ6IAN0 325 aaPredicted RBP10.04□□□□□ -0.8
ATF3-211ENST00000613954 PUSL1Q8N0Z8 303 aaKnown RBP10.04□□□□□ -0.8
ATF3-211ENST00000613954 GTPBP8Q8N3Z3 284 aaPredicted RBP10.04□□□□□ -0.8
ATF3-211ENST00000613954 NKAIN3Q8N8D7 197 aa10.04□□□□□ -0.8
ATF3-211ENST00000613954 TMEM105Q8N8V8 129 aa10.04□□□□□ -0.8
ATF3-211ENST00000613954 OR1S2Q8NGQ3 325 aa10.04□□□□□ -0.8
ATF3-211ENST00000613954 PHOSPHO1Q8TCT1 267 aa10.04□□□□□ -0.8
ATF3-211ENST00000613954 ASB5Q8WWX0 329 aa10.04□□□□□ -0.8
ATF3-211ENST00000613954 CDC6Q99741 560 aa10.04□□□□□ -0.8
ATF3-211ENST00000613954 KCNK15Q9H427 330 aa10.04□□□□□ -0.8
ATF3-211ENST00000613954 IFT22Q9H7X7 185 aa10.04□□□□□ -0.8
ATF3-211ENST00000613954 FSCN3Q9NQT6 498 aa10.04□□□□□ -0.8
ATF3-211ENST00000613954 BIN3Q9NQY0 253 aa10.04□□□□□ -0.8
ATF3-211ENST00000613954 PRTFDC1Q9NRG1 225 aa10.04□□□□□ -0.8
ATF3-211ENST00000613954 CUTCQ9NTM9 273 aa10.04□□□□□ -0.8
ATF3-211ENST00000613954 ASF1BQ9NVP2 202 aa10.04□□□□□ -0.8
ATF3-211ENST00000613954 ZNF629Q9UEG4 869 aaPredicted RBP10.04□□□□□ -0.8
ATF3-211ENST00000613954 FARSAQ9Y285 508 aaKnown RBP10.04□□□□□ -0.8
ATF3-211ENST00000613954 CARHSP1Q9Y2V2 147 aaKnown RBP10.04□□□□□ -0.8
ATF3-211ENST00000613954 PQLC2LA1A4F0 135 aa10.04□□□□□ -0.8
ATF3-211ENST00000613954 LDLRAD4O15165 306 aa10.04□□□□□ -0.8
ATF3-211ENST00000613954 ZNF264O43296 627 aa10.04□□□□□ -0.8
ATF3-211ENST00000613954 SNAPINO95295 136 aa10.04□□□□□ -0.8
ATF3-211ENST00000613954 RPS27P42677 84 aaKnown RBP10.04□□□□□ -0.8
ATF3-211ENST00000613954 SLC6A8P48029 635 aa10.04□□□□□ -0.8
ATF3-211ENST00000613954 RAB13P51153 203 aa10.04□□□□□ -0.8
ATF3-211ENST00000613954 ATP1B3P54709 279 aa10.04□□□□□ -0.8
ATF3-211ENST00000613954 CYCSP99999 105 aaKnown RBP10.04□□□□□ -0.8
ATF3-211ENST00000613954 SQSTM1Q13501 440 aa10.04□□□□□ -0.8
ATF3-211ENST00000613954 SERTAD2Q14140 314 aa10.04□□□□□ -0.8
ATF3-211ENST00000613954 NNATQ16517 81 aa10.04□□□□□ -0.8
ATF3-211ENST00000613954 PNLIPRP3Q17RR3 467 aa10.04□□□□□ -0.8
ATF3-211ENST00000613954 LRRC69Q6ZNQ3 347 aa10.04□□□□□ -0.8
ATF3-211ENST00000613954 RNF141Q8WVD5 230 aa10.04□□□□□ -0.8
ATF3-211ENST00000613954 AMELYQ99218 206 aa10.04□□□□□ -0.8
ATF3-211ENST00000613954 SLC6A7Q99884 636 aa10.04□□□□□ -0.8
ATF3-211ENST00000613954 GTF2A1LQ9UNN4 478 aa10.04□□□□□ -0.8
ATF3-211ENST00000613954 B9D1Q9UPM9 204 aa10.04□□□□□ -0.8
ATF3-211ENST00000613954 LY6G6EA0A0G2JKS1 128 aa10.03□□□□□ -0.8
ATF3-211ENST00000613954 LOC390937A0A1W2PQ73 354 aa10.03□□□□□ -0.8
ATF3-211ENST00000613954 C9orf170A2RU37 121 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms