RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 PDGFAP04085 211 aa13.12□□□□□ -0.31
CDH1-213ENST00000612417 GTF2F2P13984 249 aa13.12□□□□□ -0.31
CDH1-213ENST00000612417 GABRA1P14867 456 aa13.12□□□□□ -0.31
CDH1-213ENST00000612417 RAB14P61106 215 aa13.12□□□□□ -0.31
CDH1-213ENST00000612417 RAP1BP61224 184 aa13.12□□□□□ -0.31
CDH1-213ENST00000612417 RAP1AP62834 184 aa13.12□□□□□ -0.31
CDH1-213ENST00000612417 GUCA2AQ02747 115 aa13.12□□□□□ -0.31
CDH1-213ENST00000612417 MPPED2Q15777 294 aa13.12□□□□□ -0.31
CDH1-213ENST00000612417 OTPQ5XKR4 325 aa13.12□□□□□ -0.31
CDH1-213ENST00000612417 OR5M10Q6IEU7 315 aa13.12□□□□□ -0.31
CDH1-213ENST00000612417 TMEM205Q6UW68 189 aa13.12□□□□□ -0.31
CDH1-213ENST00000612417 RAB11FIP2Q7L804 512 aa13.12□□□□□ -0.31
CDH1-213ENST00000612417 SUMF1Q8NBK3 374 aa13.12□□□□□ -0.31
CDH1-213ENST00000612417 SLC26A10Q8NG04 563 aa13.12□□□□□ -0.31
CDH1-213ENST00000612417 OR52B4Q8NGK2 314 aa13.12□□□□□ -0.31
CDH1-213ENST00000612417 OR6M1Q8NGM8 313 aa13.12□□□□□ -0.31
CDH1-213ENST00000612417 ST8SIA1Q92185 356 aa13.12□□□□□ -0.31
CDH1-213ENST00000612417 CDC6Q99741 560 aa13.12□□□□□ -0.31
CDH1-213ENST00000612417 CDCP1Q9H5V8 836 aa13.12□□□□□ -0.31
CDH1-213ENST00000612417 SCPEP1Q9HB40 452 aa13.12□□□□□ -0.31
CDH1-213ENST00000612417 PISDQ9UG56 409 aa13.12□□□□□ -0.31
CDH1-213ENST00000612417 PPIEQ9UNP9 301 aaKnown RBP13.12□□□□□ -0.31
CDH1-213ENST00000612417 COL27A1Q8IZC6 1860 aaPredicted RBP13.12□□□□□ -0.31
CDH1-213ENST00000612417 A0A0A6YYH2 397 aa13.12□□□□□ -0.31
CDH1-213ENST00000612417 A6NJ64 397 aa13.12□□□□□ -0.31
CDH1-213ENST00000612417 LPLP06858 475 aa13.12□□□□□ -0.31
CDH1-213ENST00000612417 FBXO45P0C2W1 286 aa13.12□□□□□ -0.31
CDH1-213ENST00000612417 JMJD7P0C870 316 aa13.12□□□□□ -0.31
CDH1-213ENST00000612417 HTR2CP28335 458 aa13.12□□□□□ -0.31
CDH1-213ENST00000612417 MELKQ14680 651 aa13.12□□□□□ -0.31
CDH1-213ENST00000612417 MFSD13AQ14CX5 517 aa13.12□□□□□ -0.31
CDH1-213ENST00000612417 NHLRC3Q5JS37 347 aa13.12□□□□□ -0.31
CDH1-213ENST00000612417 DNM1P34Q6PK57 102 aa13.12□□□□□ -0.31
CDH1-213ENST00000612417 COMMD7Q86VX2 200 aa13.12□□□□□ -0.31
CDH1-213ENST00000612417 CDH26Q8IXH8 852 aa13.12□□□□□ -0.31
CDH1-213ENST00000612417 PLPP7Q8NBV4 271 aa13.12□□□□□ -0.31
CDH1-213ENST00000612417 OR51S1Q8NGJ8 323 aa13.12□□□□□ -0.31
CDH1-213ENST00000612417 DUSP19Q8WTR2 217 aa13.12□□□□□ -0.31
CDH1-213ENST00000612417 PPP1R14AQ96A00 147 aa13.12□□□□□ -0.31
CDH1-213ENST00000612417 KCNK15Q9H427 330 aa13.12□□□□□ -0.31
CDH1-213ENST00000612417 KIF25Q9UIL4 384 aa13.12□□□□□ -0.31
CDH1-213ENST00000612417 HHLA2Q9UM44 414 aa13.12□□□□□ -0.31
CDH1-213ENST00000612417 GTF2A1LQ9UNN4 478 aa13.12□□□□□ -0.31
CDH1-213ENST00000612417 COA3Q9Y2R0 106 aaPredicted RBP13.12□□□□□ -0.31
CDH1-213ENST00000612417 A0A1W2PPL8 197 aa13.11□□□□□ -0.31
CDH1-213ENST00000612417 LOC390937A0A1W2PQ73 354 aa13.11□□□□□ -0.31
CDH1-213ENST00000612417 ANKUB1A6NFN9 424 aa13.11□□□□□ -0.31
CDH1-213ENST00000612417 L7N2F9 121 aa13.11□□□□□ -0.31
CDH1-213ENST00000612417 LDLRAD4O15165 306 aa13.11□□□□□ -0.31
CDH1-213ENST00000612417 DOK2O60496 412 aa13.11□□□□□ -0.31
CDH1-213ENST00000612417 STK17BO94768 372 aa13.11□□□□□ -0.31
CDH1-213ENST00000612417 PRKACAP17612 351 aa13.11□□□□□ -0.31
CDH1-213ENST00000612417 ACHEP22303 614 aa13.11□□□□□ -0.31
CDH1-213ENST00000612417 STEAP1BQ6NZ63 245 aa13.11□□□□□ -0.31
CDH1-213ENST00000612417 DEGS2Q6QHC5 323 aa13.11□□□□□ -0.31
CDH1-213ENST00000612417 NHLRC1Q6VVB1 395 aa13.11□□□□□ -0.31
CDH1-213ENST00000612417 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.11□□□□□ -0.31
CDH1-213ENST00000612417 ZNF248Q8NDW4 579 aa13.11□□□□□ -0.31
CDH1-213ENST00000612417 OR2AK2Q8NG84 335 aa13.11□□□□□ -0.31
CDH1-213ENST00000612417 OR5L2Q8NGL0 311 aa13.11□□□□□ -0.31
CDH1-213ENST00000612417 ASB10Q8WXI3 467 aa13.11□□□□□ -0.31
CDH1-213ENST00000612417 PTX4Q96A99 478 aa13.11□□□□□ -0.31
CDH1-213ENST00000612417 SFXN2Q96NB2 322 aa13.11□□□□□ -0.31
CDH1-213ENST00000612417 ATG5Q9H1Y0 275 aa13.11□□□□□ -0.31
CDH1-213ENST00000612417 SLCO5A1Q9H2Y9 848 aa13.11□□□□□ -0.31
CDH1-213ENST00000612417 C1orf198Q9H425 327 aa13.11□□□□□ -0.31
CDH1-213ENST00000612417 TAS2R4Q9NYW5 299 aa13.11□□□□□ -0.31
CDH1-213ENST00000612417 ZNF107Q9UII5 783 aaPredicted RBP13.11□□□□□ -0.31
CDH1-213ENST00000612417 PMS2P1A4D2B8 440 aa13.11□□□□□ -0.31
CDH1-213ENST00000612417 MS4A18H0YCH9 400 aa13.11□□□□□ -0.31
CDH1-213ENST00000612417 RAD1O60671 282 aa13.11□□□□□ -0.31
CDH1-213ENST00000612417 AQP8O94778 261 aa13.11□□□□□ -0.31
CDH1-213ENST00000612417 CD3DP04234 171 aa13.11□□□□□ -0.31
CDH1-213ENST00000612417 RLN1P04808 185 aa13.11□□□□□ -0.31
CDH1-213ENST00000612417 ITGB2P05107 769 aa13.11□□□□□ -0.31
CDH1-213ENST00000612417 CYC1P08574 325 aa13.11□□□□□ -0.31
CDH1-213ENST00000612417 NUBP1P53384 320 aa13.11□□□□□ -0.31
CDH1-213ENST00000612417 SUMO3P55854 103 aaPredicted RBP13.11□□□□□ -0.31
CDH1-213ENST00000612417 H2BFSP57053 126 aa13.11□□□□□ -0.31
CDH1-213ENST00000612417 TAS2R19P59542 299 aa13.11□□□□□ -0.31
CDH1-213ENST00000612417 MS4A18Q3C1V0 323 aa13.11□□□□□ -0.31
CDH1-213ENST00000612417 GLYATL3Q5SZD4 288 aa13.11□□□□□ -0.31
CDH1-213ENST00000612417 C3P1Q6ZMU1 363 aa13.11□□□□□ -0.31
CDH1-213ENST00000612417 ADGRE4PQ86SQ3 457 aa13.11□□□□□ -0.31
CDH1-213ENST00000612417 TMEM229BQ8NBD8 167 aa13.11□□□□□ -0.31
CDH1-213ENST00000612417 MFSD8Q8NHS3 518 aa13.11□□□□□ -0.31
CDH1-213ENST00000612417 NUBPLQ8TB37 319 aa13.11□□□□□ -0.31
CDH1-213ENST00000612417 ST7LQ8TDW4 575 aa13.11□□□□□ -0.31
CDH1-213ENST00000612417 SLC25A44Q96H78 314 aaPredicted RBP13.11□□□□□ -0.31
CDH1-213ENST00000612417 G6PC2Q9NQR9 355 aa13.11□□□□□ -0.31
CDH1-213ENST00000612417 EP300Q09472 2414 aaPredicted RBP13.1□□□□□ -0.31
CDH1-213ENST00000612417 ZFAND5O76080 213 aa13.1□□□□□ -0.31
CDH1-213ENST00000612417 HLA-DOBP13765 273 aa13.1□□□□□ -0.31
CDH1-213ENST00000612417 HOXB1P14653 301 aaPredicted RBP13.1□□□□□ -0.31
CDH1-213ENST00000612417 DAP3P51398 398 aaKnown RBP13.1□□□□□ -0.31
CDH1-213ENST00000612417 CAPZA1P52907 286 aa13.1□□□□□ -0.31
CDH1-213ENST00000612417 SEC61A1P61619 476 aaKnown RBP13.1□□□□□ -0.31
CDH1-213ENST00000612417 AANATQ16613 207 aa13.1□□□□□ -0.31
CDH1-213ENST00000612417 C1orf100Q5SVJ3 147 aa13.1□□□□□ -0.31
CDH1-213ENST00000612417 ZNF704Q6ZNC4 412 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms