RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 DDX28Q9NUL7 540 aaKnown RBP15.33■□□□□ 0.04
SREK1-216ENST00000612404 RTTNQ86VV8 2226 aa15.33■□□□□ 0.04
SREK1-216ENST00000612404 OGG1O15527 345 aa15.32■□□□□ 0.04
SREK1-216ENST00000612404 NOL3O60936 208 aaKnown RBP15.32■□□□□ 0.04
SREK1-216ENST00000612404 HOXC12P31275 282 aa15.32■□□□□ 0.04
SREK1-216ENST00000612404 GDI2P50395 445 aaKnown RBP15.32■□□□□ 0.04
SREK1-216ENST00000612404 UBE2NP61088 152 aaKnown RBP15.32■□□□□ 0.04
SREK1-216ENST00000612404 RAB1AP62820 205 aa15.32■□□□□ 0.04
SREK1-216ENST00000612404 TLE1Q04724 770 aa15.32■□□□□ 0.04
SREK1-216ENST00000612404 MFGE8Q08431 387 aaPredicted RBP15.32■□□□□ 0.04
SREK1-216ENST00000612404 ZNF829Q3KNS6 432 aaPredicted RBP15.32■□□□□ 0.04
SREK1-216ENST00000612404 DMKNQ6E0U4 476 aaPredicted RBP15.32■□□□□ 0.04
SREK1-216ENST00000612404 LIX1LQ8IVB5 337 aa15.32■□□□□ 0.04
SREK1-216ENST00000612404 NANOS1Q8WY41 292 aaKnown RBP15.32■□□□□ 0.04
SREK1-216ENST00000612404 SLC7A6Q92536 515 aa15.32■□□□□ 0.04
SREK1-216ENST00000612404 SMIM19Q96E16 107 aa15.32■□□□□ 0.04
SREK1-216ENST00000612404 BBC3Q96PG8 261 aaPredicted RBP15.32■□□□□ 0.04
SREK1-216ENST00000612404 FAM192AQ9GZU8 254 aa15.32■□□□□ 0.04
SREK1-216ENST00000612404 FRRS1LQ9P0K9 344 aa15.32■□□□□ 0.04
SREK1-216ENST00000612404 TMEM269A0A1B0GVZ9 245 aa15.32■□□□□ 0.04
SREK1-216ENST00000612404 A0A1W2PR80 420 aa15.32■□□□□ 0.04
SREK1-216ENST00000612404 F5H5K5 113 aa15.32■□□□□ 0.04
SREK1-216ENST00000612404 PLPP2O43688 288 aa15.32■□□□□ 0.04
SREK1-216ENST00000612404 UBL3O95164 117 aa15.32■□□□□ 0.04
SREK1-216ENST00000612404 PNPP00491 289 aa15.32■□□□□ 0.04
SREK1-216ENST00000612404 PSMA1P25786 263 aaKnown RBP15.32■□□□□ 0.04
SREK1-216ENST00000612404 ARR3P36575 388 aa15.32■□□□□ 0.04
SREK1-216ENST00000612404 HTR5AP47898 357 aa15.32■□□□□ 0.04
SREK1-216ENST00000612404 RPS25P62851 125 aaKnown RBP15.32■□□□□ 0.04
SREK1-216ENST00000612404 GPR50Q13585 617 aa15.32■□□□□ 0.04
SREK1-216ENST00000612404 ALKBH1Q13686 389 aaKnown RBP15.32■□□□□ 0.04
SREK1-216ENST00000612404 ESPL1Q14674 2120 aa15.32■□□□□ 0.04
SREK1-216ENST00000612404 ODF4Q2M2E3 257 aa15.32■□□□□ 0.04
SREK1-216ENST00000612404 TMEM53Q6P2H8 277 aa15.32■□□□□ 0.04
SREK1-216ENST00000612404 ANKRD13BQ86YJ7 626 aa15.32■□□□□ 0.04
SREK1-216ENST00000612404 ALDH16A1Q8IZ83 802 aa15.32■□□□□ 0.04
SREK1-216ENST00000612404 OR2G2Q8NGZ5 317 aa15.32■□□□□ 0.04
SREK1-216ENST00000612404 OR1F12Q8NHA8 337 aa15.32■□□□□ 0.04
SREK1-216ENST00000612404 GHSRQ92847 366 aa15.32■□□□□ 0.04
SREK1-216ENST00000612404 ISOC1Q96CN7 298 aa15.32■□□□□ 0.04
SREK1-216ENST00000612404 PDCD1LG2Q9BQ51 273 aa15.32■□□□□ 0.04
SREK1-216ENST00000612404 OR51E2Q9H255 320 aa15.32■□□□□ 0.04
SREK1-216ENST00000612404 NOX3Q9HBY0 568 aa15.32■□□□□ 0.04
SREK1-216ENST00000612404 ENPP5Q9UJA9 477 aa15.32■□□□□ 0.04
SREK1-216ENST00000612404 N6AMT1Q9Y5N5 214 aa15.32■□□□□ 0.04
SREK1-216ENST00000612404 R4GMQ9 66 aa15.32■□□□□ 0.04
SREK1-216ENST00000612404 LOC100506127A0A0U1RQW1 187 aa15.31■□□□□ 0.04
SREK1-216ENST00000612404 A8MXE2 369 aa15.31■□□□□ 0.04
SREK1-216ENST00000612404 LOC110117498-PIK3R3F6TDL0 507 aa15.31■□□□□ 0.04
SREK1-216ENST00000612404 SYNGR3O43761 229 aa15.31■□□□□ 0.04
SREK1-216ENST00000612404 AIREO43918 545 aa15.31■□□□□ 0.04
SREK1-216ENST00000612404 GABRA5P31644 462 aa15.31■□□□□ 0.04
SREK1-216ENST00000612404 LSM3P62310 102 aaKnown RBP15.31■□□□□ 0.04
SREK1-216ENST00000612404 IGFBP7Q16270 282 aa15.31■□□□□ 0.04
SREK1-216ENST00000612404 GSG1Q2KHT4 349 aa15.31■□□□□ 0.04
SREK1-216ENST00000612404 SFRP5Q5T4F7 317 aa15.31■□□□□ 0.04
SREK1-216ENST00000612404 ZNF544Q6NX49 715 aa15.31■□□□□ 0.04
SREK1-216ENST00000612404 BHLHA15Q7RTS1 189 aaPredicted RBP15.31■□□□□ 0.04
SREK1-216ENST00000612404 MRGPRGQ86SM5 289 aa15.31■□□□□ 0.04
SREK1-216ENST00000612404 PRSS35Q8N3Z0 413 aa15.31■□□□□ 0.04
SREK1-216ENST00000612404 ZNF283Q8N7M2 679 aa15.31■□□□□ 0.04
SREK1-216ENST00000612404 C1orf162Q8NEQ5 155 aaPredicted RBP15.31■□□□□ 0.04
SREK1-216ENST00000612404 RPL3LQ92901 407 aaKnown RBP15.31■□□□□ 0.04
SREK1-216ENST00000612404 SPTSSAQ969W0 71 aa15.31■□□□□ 0.04
SREK1-216ENST00000612404 KCNJ15Q99712 375 aa15.31■□□□□ 0.04
SREK1-216ENST00000612404 CHCHD6Q9BRQ6 235 aa15.31■□□□□ 0.04
SREK1-216ENST00000612404 NIPAL2Q9H841 368 aa15.31■□□□□ 0.04
SREK1-216ENST00000612404 EXOSC4Q9NPD3 245 aaKnown RBP15.31■□□□□ 0.04
SREK1-216ENST00000612404 RSL24D1Q9UHA3 163 aaKnown RBP15.31■□□□□ 0.04
SREK1-216ENST00000612404 PRB1P04280 392 aa15.31■□□□□ 0.04
SREK1-216ENST00000612404 DBHP09172 617 aa15.31■□□□□ 0.04
SREK1-216ENST00000612404 IL32P24001 234 aa15.31■□□□□ 0.04
SREK1-216ENST00000612404 SLC6A9P48067 706 aa15.31■□□□□ 0.04
SREK1-216ENST00000612404 CX3CR1P49238 355 aa15.31■□□□□ 0.04
SREK1-216ENST00000612404 ECH1Q13011 328 aa15.31■□□□□ 0.04
SREK1-216ENST00000612404 SLC16A12Q6ZSM3 486 aa15.31■□□□□ 0.04
SREK1-216ENST00000612404 DPPA2Q7Z7J5 298 aa15.31■□□□□ 0.04
SREK1-216ENST00000612404 RELL2Q8NC24 303 aaPredicted RBP15.31■□□□□ 0.04
SREK1-216ENST00000612404 PRR7Q8TB68 274 aa15.31■□□□□ 0.04
SREK1-216ENST00000612404 DGCR14Q96DF8 476 aaKnown RBP15.31■□□□□ 0.04
SREK1-216ENST00000612404 SRSF10O75494 262 aaKnown RBP15.3■□□□□ 0.04
SREK1-216ENST00000612404 SLC2A1P11166 492 aa15.3■□□□□ 0.04
SREK1-216ENST00000612404 DCTDP32321 178 aa15.3■□□□□ 0.04
SREK1-216ENST00000612404 TMBIM6P55061 237 aa15.3■□□□□ 0.04
SREK1-216ENST00000612404 WDR38Q5JTN6 314 aa15.3■□□□□ 0.04
SREK1-216ENST00000612404 CCDC36Q8IYA8 594 aa15.3■□□□□ 0.04
SREK1-216ENST00000612404 CPEB3Q8NE35 698 aaKnown RBP15.3■□□□□ 0.04
SREK1-216ENST00000612404 OR5AK2Q8NH90 309 aa15.3■□□□□ 0.04
SREK1-216ENST00000612404 RAB2BQ8WUD1 216 aa15.3■□□□□ 0.04
SREK1-216ENST00000612404 PPP1R14AQ96A00 147 aa15.3■□□□□ 0.04
SREK1-216ENST00000612404 PGLYRP3Q96LB9 341 aa15.3■□□□□ 0.04
SREK1-216ENST00000612404 C4orf45Q96LM5 186 aa15.3■□□□□ 0.04
SREK1-216ENST00000612404 STUB1Q9UNE7 303 aa15.3■□□□□ 0.04
SREK1-216ENST00000612404 SLC22A13Q9Y226 551 aa15.3■□□□□ 0.04
SREK1-216ENST00000612404 SF3B6Q9Y3B4 125 aaKnown RBP15.3■□□□□ 0.04
SREK1-216ENST00000612404 OR6C6A6NF89 314 aa15.29■□□□□ 0.04
SREK1-216ENST00000612404 ZFPL1O95159 310 aa15.29■□□□□ 0.04
SREK1-216ENST00000612404 KIR3DL2P43630 455 aa15.29■□□□□ 0.04
SREK1-216ENST00000612404 MMP16P51512 607 aa15.29■□□□□ 0.04
SREK1-216ENST00000612404 PSMA6P60900 246 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms