RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 LAP3P28838 519 aa11.24□□□□□ -0.61
CDH1-212ENST00000611625 ECI1P42126 302 aa11.24□□□□□ -0.61
CDH1-212ENST00000611625 OGFOD3Q6PK18 319 aa11.24□□□□□ -0.61
CDH1-212ENST00000611625 C17orf107Q6ZR85 190 aa11.24□□□□□ -0.61
CDH1-212ENST00000611625 OR4D9Q8NGE8 314 aa11.24□□□□□ -0.61
CDH1-212ENST00000611625 RPP25Q9BUL9 199 aaKnown RBP11.24□□□□□ -0.61
CDH1-212ENST00000611625 PPP1R3EQ9H7J1 279 aa11.24□□□□□ -0.61
CDH1-212ENST00000611625 GPR84Q9NQS5 396 aa11.24□□□□□ -0.61
CDH1-212ENST00000611625 FLRT3Q9NZU0 649 aa11.24□□□□□ -0.61
CDH1-212ENST00000611625 PIGLQ9Y2B2 252 aa11.24□□□□□ -0.61
CDH1-212ENST00000611625 DSPPQ9NZW4 1301 aa11.24□□□□□ -0.61
CDH1-212ENST00000611625 LGALS8O00214 317 aa11.24□□□□□ -0.61
CDH1-212ENST00000611625 ACSM4P0C7M7 580 aa11.24□□□□□ -0.61
CDH1-212ENST00000611625 GABRG2P18507 467 aa11.24□□□□□ -0.61
CDH1-212ENST00000611625 TBPP20226 339 aa11.24□□□□□ -0.61
CDH1-212ENST00000611625 APLNRP35414 380 aa11.24□□□□□ -0.61
CDH1-212ENST00000611625 ZNF133P52736 654 aaPredicted RBP11.24□□□□□ -0.61
CDH1-212ENST00000611625 TMEM229BQ8NBD8 167 aa11.24□□□□□ -0.61
CDH1-212ENST00000611625 PPP1R1CQ8WVI7 109 aa11.24□□□□□ -0.61
CDH1-212ENST00000611625 NXT1Q9UKK6 140 aaKnown RBP11.24□□□□□ -0.61
CDH1-212ENST00000611625 SLC5A6Q9Y289 635 aa11.24□□□□□ -0.61
CDH1-212ENST00000611625 ZNF638Q14966 1978 aaKnown RBP11.24□□□□□ -0.61
CDH1-212ENST00000611625 A0A1B0GTH9 108 aa11.24□□□□□ -0.61
CDH1-212ENST00000611625 A0A1W2PNR3 127 aa11.24□□□□□ -0.61
CDH1-212ENST00000611625 OGG1O15527 345 aa11.24□□□□□ -0.61
CDH1-212ENST00000611625 OMGP23515 440 aa11.24□□□□□ -0.61
CDH1-212ENST00000611625 ZNF141Q15928 474 aa11.24□□□□□ -0.61
CDH1-212ENST00000611625 PRSS53Q2L4Q9 553 aa11.24□□□□□ -0.61
CDH1-212ENST00000611625 LYG2Q86SG7 212 aa11.24□□□□□ -0.61
CDH1-212ENST00000611625 HSD17B11Q8NBQ5 300 aa11.24□□□□□ -0.61
CDH1-212ENST00000611625 FAM213BQ8TBF2 198 aa11.24□□□□□ -0.61
CDH1-212ENST00000611625 TCEAL3Q969E4 200 aa11.24□□□□□ -0.61
CDH1-212ENST00000611625 TINAGL1Q9GZM7 467 aaPredicted RBP11.24□□□□□ -0.61
CDH1-212ENST00000611625 ZNF629Q9UEG4 869 aaPredicted RBP11.24□□□□□ -0.61
CDH1-212ENST00000611625 LCTP09848 1927 aa11.24□□□□□ -0.61
CDH1-212ENST00000611625 SCN3AQ9NY46 2000 aa11.23□□□□□ -0.61
CDH1-212ENST00000611625 HMGB3O15347 200 aaKnown RBP11.23□□□□□ -0.61
CDH1-212ENST00000611625 GPR137BO60478 399 aa11.23□□□□□ -0.61
CDH1-212ENST00000611625 ITGB2P05107 769 aa11.23□□□□□ -0.61
CDH1-212ENST00000611625 QDPRP09417 244 aa11.23□□□□□ -0.61
CDH1-212ENST00000611625 GNB3P16520 340 aa11.23□□□□□ -0.61
CDH1-212ENST00000611625 TBXA2RP21731 343 aa11.23□□□□□ -0.61
CDH1-212ENST00000611625 THEM4Q5T1C6 240 aa11.23□□□□□ -0.61
CDH1-212ENST00000611625 AVPI1Q5T686 147 aa11.23□□□□□ -0.61
CDH1-212ENST00000611625 C9orf135Q5VTT2 229 aa11.23□□□□□ -0.61
CDH1-212ENST00000611625 OR1J2Q8NGS2 313 aa11.23□□□□□ -0.61
CDH1-212ENST00000611625 MARCH1Q8TCQ1 289 aa11.23□□□□□ -0.61
CDH1-212ENST00000611625 TAAR8Q969N4 342 aa11.23□□□□□ -0.61
CDH1-212ENST00000611625 PBOV1Q9GZY1 135 aa11.23□□□□□ -0.61
CDH1-212ENST00000611625 LRP12Q9Y561 859 aa11.23□□□□□ -0.61
CDH1-212ENST00000611625 PLXNA1Q9UIW2 1896 aa11.23□□□□□ -0.61
CDH1-212ENST00000611625 MRPL33O75394 65 aaKnown RBP11.23□□□□□ -0.61
CDH1-212ENST00000611625 SECTM1Q8WVN6 248 aa11.23□□□□□ -0.61
CDH1-212ENST00000611625 NUDT9Q9BW91 350 aa11.23□□□□□ -0.61
CDH1-212ENST00000611625 WWTR1Q9GZV5 400 aa11.23□□□□□ -0.61
CDH1-212ENST00000611625 SLC22A11Q9NSA0 550 aa11.23□□□□□ -0.61
CDH1-212ENST00000611625 LILRA5A6NI73 299 aa11.23□□□□□ -0.61
CDH1-212ENST00000611625 PI3P19957 117 aa11.23□□□□□ -0.61
CDH1-212ENST00000611625 HMGN3Q15651 99 aa11.23□□□□□ -0.61
CDH1-212ENST00000611625 KCNRGQ8N5I3 272 aa11.23□□□□□ -0.61
CDH1-212ENST00000611625 EXD3Q8N9H8 876 aa11.23□□□□□ -0.61
CDH1-212ENST00000611625 LRRC61Q9BV99 259 aa11.23□□□□□ -0.61
CDH1-212ENST00000611625 OR51B6Q9H340 312 aa11.23□□□□□ -0.61
CDH1-212ENST00000611625 PCDHGA5Q9Y5G8 931 aa11.23□□□□□ -0.61
CDH1-212ENST00000611625 PCYT1BQ9Y5K3 369 aaPredicted RBP11.23□□□□□ -0.61
CDH1-212ENST00000611625 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.23□□□□□ -0.61
CDH1-212ENST00000611625 SDCBPO00560 298 aaPredicted RBP11.23□□□□□ -0.61
CDH1-212ENST00000611625 CXCL3P19876 107 aa11.23□□□□□ -0.61
CDH1-212ENST00000611625 MSR1P21757 451 aa11.23□□□□□ -0.61
CDH1-212ENST00000611625 ALDH3B1P43353 468 aa11.23□□□□□ -0.61
CDH1-212ENST00000611625 C1orf53Q5VUE5 145 aa11.23□□□□□ -0.61
CDH1-212ENST00000611625 ANKRD16Q6P6B7 361 aa11.23□□□□□ -0.61
CDH1-212ENST00000611625 SPICQ8N5J4 248 aa11.23□□□□□ -0.61
CDH1-212ENST00000611625 HRH3Q9Y5N1 445 aa11.23□□□□□ -0.61
CDH1-212ENST00000611625 BRCA1P38398 1863 aaKnown RBP11.22□□□□□ -0.61
CDH1-212ENST00000611625 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.22□□□□□ -0.61
CDH1-212ENST00000611625 ARPC4-TTLL3A0A0A6YYG9 625 aa11.22□□□□□ -0.61
CDH1-212ENST00000611625 RFPL4AA6NLU0 287 aa11.22□□□□□ -0.61
CDH1-212ENST00000611625 RFPL4AL1F8VTS6 287 aa11.22□□□□□ -0.61
CDH1-212ENST00000611625 TNFSF12O43508 249 aa11.22□□□□□ -0.61
CDH1-212ENST00000611625 SLC34A2O95436 690 aa11.22□□□□□ -0.61
CDH1-212ENST00000611625 HOXC4P09017 264 aaPredicted RBP11.22□□□□□ -0.61
CDH1-212ENST00000611625 ZNF136P52737 540 aa11.22□□□□□ -0.61
CDH1-212ENST00000611625 SRPXP78539 464 aa11.22□□□□□ -0.61
CDH1-212ENST00000611625 PHLDA2Q53GA4 152 aa11.22□□□□□ -0.61
CDH1-212ENST00000611625 C9orf62Q8N4C0 152 aa11.22□□□□□ -0.61
CDH1-212ENST00000611625 OR4D6Q8NGJ1 314 aa11.22□□□□□ -0.61
CDH1-212ENST00000611625 LRRC3BQ96PB8 259 aa11.22□□□□□ -0.61
CDH1-212ENST00000611625 NKX3-1Q99801 234 aaPredicted RBP11.22□□□□□ -0.61
CDH1-212ENST00000611625 TCEAL7Q9BRU2 100 aa11.22□□□□□ -0.61
CDH1-212ENST00000611625 TAF9BQ9HBM6 251 aa11.22□□□□□ -0.61
CDH1-212ENST00000611625 SLC17A5Q9NRA2 495 aa11.22□□□□□ -0.61
CDH1-212ENST00000611625 CES1P1Q9UKY3 287 aa11.22□□□□□ -0.61
CDH1-212ENST00000611625 PUS1Q9Y606 427 aaKnown RBP eCLIP11.22□□□□□ -0.61
CDH1-212ENST00000611625 RALGAPA2Q2PPJ7 1873 aa11.22□□□□□ -0.61
CDH1-212ENST00000611625 MSTNO14793 375 aa11.22□□□□□ -0.61
CDH1-212ENST00000611625 PHF1O43189 567 aaPredicted RBP11.22□□□□□ -0.61
CDH1-212ENST00000611625 TXNL1O43396 289 aa11.22□□□□□ -0.61
CDH1-212ENST00000611625 UBE2IP63279 158 aaKnown RBP11.22□□□□□ -0.61
CDH1-212ENST00000611625 ZNF117Q03924 483 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms