RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 RASD2Q96D21 266 aa12.48□□□□□ -0.41
CTSA-216ENST00000607212 ZNF582Q96NG8 517 aaPredicted RBP12.48□□□□□ -0.41
CTSA-216ENST00000607212 OR8B2Q96RD0 313 aa12.48□□□□□ -0.41
CTSA-216ENST00000607212 SIGLEC11Q96RL6 698 aa12.48□□□□□ -0.41
CTSA-216ENST00000607212 GCM1Q9NP62 436 aa12.48□□□□□ -0.41
CTSA-216ENST00000607212 MIOXQ9UGB7 285 aa12.48□□□□□ -0.41
CTSA-216ENST00000607212 COA3Q9Y2R0 106 aaPredicted RBP12.48□□□□□ -0.41
CTSA-216ENST00000607212 POLR3KQ9Y2Y1 108 aaPredicted RBP12.48□□□□□ -0.41
CTSA-216ENST00000607212 SNX13Q9Y5W8 968 aa12.48□□□□□ -0.41
CTSA-216ENST00000607212 PRSS37A4D1T9 235 aa12.47□□□□□ -0.41
CTSA-216ENST00000607212 F5H0A9 414 aaPredicted RBP12.47□□□□□ -0.41
CTSA-216ENST00000607212 SOCS2O14508 198 aa12.47□□□□□ -0.41
CTSA-216ENST00000607212 CRYBA1P05813 215 aa12.47□□□□□ -0.41
CTSA-216ENST00000607212 DBHP09172 617 aa12.47□□□□□ -0.41
CTSA-216ENST00000607212 RAC2P15153 192 aa12.47□□□□□ -0.41
CTSA-216ENST00000607212 CTLA4P16410 223 aa12.47□□□□□ -0.41
CTSA-216ENST00000607212 CD80P33681 288 aa12.47□□□□□ -0.41
CTSA-216ENST00000607212 RGS6P49758 472 aa12.47□□□□□ -0.41
CTSA-216ENST00000607212 DEFA6Q01524 100 aa12.47□□□□□ -0.41
CTSA-216ENST00000607212 IFI44LQ53G44 452 aa12.47□□□□□ -0.41
CTSA-216ENST00000607212 MBOAT2Q6ZWT7 520 aa12.47□□□□□ -0.41
CTSA-216ENST00000607212 RNF113BQ8IZP6 322 aaKnown RBP12.47□□□□□ -0.41
CTSA-216ENST00000607212 C1orf87Q8N0U7 546 aa12.47□□□□□ -0.41
CTSA-216ENST00000607212 NEIL1Q96FI4 390 aaPredicted RBP12.47□□□□□ -0.41
CTSA-216ENST00000607212 FAM46AQ96IP4 442 aaKnown RBP12.47□□□□□ -0.41
CTSA-216ENST00000607212 MEGF10Q96KG7 1140 aa12.47□□□□□ -0.41
CTSA-216ENST00000607212 C1orf147Q96MC9 270 aaPredicted RBP12.47□□□□□ -0.41
CTSA-216ENST00000607212 SYT4Q9H2B2 425 aa12.47□□□□□ -0.41
CTSA-216ENST00000607212 SOX21Q9Y651 276 aaPredicted RBP12.47□□□□□ -0.41
CTSA-216ENST00000607212 A0A087WUU8 490 aa12.46□□□□□ -0.41
CTSA-216ENST00000607212 IGHV2-70DA0A0C4DH43 119 aa12.46□□□□□ -0.41
CTSA-216ENST00000607212 MDFIC2A0A1B0GVS7 189 aa12.46□□□□□ -0.41
CTSA-216ENST00000607212 OR6C6A6NF89 314 aa12.46□□□□□ -0.41
CTSA-216ENST00000607212 POM121CA8CG34 1229 aa12.46□□□□□ -0.41
CTSA-216ENST00000607212 F5H5P2 479 aa12.46□□□□□ -0.41
CTSA-216ENST00000607212 CDC42EP2O14613 210 aa12.46□□□□□ -0.41
CTSA-216ENST00000607212 RER1O15258 196 aa12.46□□□□□ -0.41
CTSA-216ENST00000607212 AHCYL1O43865 530 aa12.46□□□□□ -0.41
CTSA-216ENST00000607212 WNT2P09544 360 aa12.46□□□□□ -0.41
CTSA-216ENST00000607212 MDKP21741 143 aaPredicted RBP12.46□□□□□ -0.41
CTSA-216ENST00000607212 FUT4P22083 530 aa12.46□□□□□ -0.41
CTSA-216ENST00000607212 PAX8Q06710 450 aa12.46□□□□□ -0.41
CTSA-216ENST00000607212 FGD3Q5JSP0 725 aa12.46□□□□□ -0.41
CTSA-216ENST00000607212 HDXQ7Z353 690 aa12.46□□□□□ -0.41
CTSA-216ENST00000607212 GLB1L2Q8IW92 636 aa12.46□□□□□ -0.41
CTSA-216ENST00000607212 OR8G5Q8NG78 346 aa12.46□□□□□ -0.41
CTSA-216ENST00000607212 RAB40AQ8WXH6 277 aa12.46□□□□□ -0.41
CTSA-216ENST00000607212 FAM162AQ96A26 154 aa12.46□□□□□ -0.41
CTSA-216ENST00000607212 APOBEC3DQ96AK3 386 aaPredicted RBP12.46□□□□□ -0.41
CTSA-216ENST00000607212 HSH2DQ96JZ2 352 aa12.46□□□□□ -0.41
CTSA-216ENST00000607212 NUDT16L1Q9BRJ7 211 aaKnown RBP12.46□□□□□ -0.41
CTSA-216ENST00000607212 HCAR1Q9BXC0 346 aa12.46□□□□□ -0.41
CTSA-216ENST00000607212 WDR76Q9H967 626 aa12.46□□□□□ -0.41
CTSA-216ENST00000607212 AURKCQ9UQB9 309 aa12.46□□□□□ -0.41
CTSA-216ENST00000607212 TMEM5Q9Y2B1 443 aa12.46□□□□□ -0.41
CTSA-216ENST00000607212 AP3M1Q9Y2T2 418 aa12.46□□□□□ -0.41
CTSA-216ENST00000607212 CAPN7Q9Y6W3 813 aa12.46□□□□□ -0.41
CTSA-216ENST00000607212 H0YL77 283 aa12.45□□□□□ -0.42
CTSA-216ENST00000607212 CXCR6O00574 342 aa12.45□□□□□ -0.42
CTSA-216ENST00000607212 HOXA3O43365 443 aaPredicted RBP12.45□□□□□ -0.42
CTSA-216ENST00000607212 NDUFB2O95178 105 aa12.45□□□□□ -0.42
CTSA-216ENST00000607212 PITPNBP48739 271 aa12.45□□□□□ -0.42
CTSA-216ENST00000607212 LSM6P62312 80 aaKnown RBP12.45□□□□□ -0.42
CTSA-216ENST00000607212 MIDNQ504T8 468 aa12.45□□□□□ -0.42
CTSA-216ENST00000607212 CCDC92Q53HC0 331 aaPredicted RBP12.45□□□□□ -0.42
CTSA-216ENST00000607212 FAM201AQ5SY85 155 aa12.45□□□□□ -0.42
CTSA-216ENST00000607212 GPR157Q5UAW9 335 aa12.45□□□□□ -0.42
CTSA-216ENST00000607212 C16orf87Q6PH81 154 aa12.45□□□□□ -0.42
CTSA-216ENST00000607212 DNM1P34Q6PK57 102 aa12.45□□□□□ -0.42
CTSA-216ENST00000607212 BRD3OSQ6XYD6 125 aa12.45□□□□□ -0.42
CTSA-216ENST00000607212 C17orf107Q6ZR85 190 aa12.45□□□□□ -0.42
CTSA-216ENST00000607212 POU5F2Q8N7G0 328 aa12.45□□□□□ -0.42
CTSA-216ENST00000607212 OR11L1Q8NGX0 322 aa12.45□□□□□ -0.42
CTSA-216ENST00000607212 TMIGD2Q96BF3 282 aa12.45□□□□□ -0.42
CTSA-216ENST00000607212 RCN3Q96D15 328 aa12.45□□□□□ -0.42
CTSA-216ENST00000607212 TMEM246Q9BRR3 403 aa12.45□□□□□ -0.42
CTSA-216ENST00000607212 MMADHCQ9H3L0 296 aaPredicted RBP12.45□□□□□ -0.42
CTSA-216ENST00000607212 TMEM165Q9HC07 324 aa12.45□□□□□ -0.42
CTSA-216ENST00000607212 KRCC1Q9NPI7 259 aaPredicted RBP12.45□□□□□ -0.42
CTSA-216ENST00000607212 SAR1AQ9NR31 198 aa12.45□□□□□ -0.42
CTSA-216ENST00000607212 TMEM100Q9NV29 134 aa12.45□□□□□ -0.42
CTSA-216ENST00000607212 KIF17Q9P2E2 1029 aa12.45□□□□□ -0.42
CTSA-216ENST00000607212 CLN8Q9UBY8 286 aa12.45□□□□□ -0.42
CTSA-216ENST00000607212 RPS6KA6Q9UK32 745 aa12.45□□□□□ -0.42
CTSA-216ENST00000607212 FAM32AQ9Y421 112 aaKnown RBP12.45□□□□□ -0.42
CTSA-216ENST00000607212 IER3IP1Q9Y5U9 82 aa12.45□□□□□ -0.42
CTSA-216ENST00000607212 CLDN34H7C241 214 aa12.44□□□□□ -0.42
CTSA-216ENST00000607212 FFAR1O14842 300 aa12.44□□□□□ -0.42
CTSA-216ENST00000607212 SERPINA1P01009 418 aa12.44□□□□□ -0.42
CTSA-216ENST00000607212 KNG1P01042 644 aa12.44□□□□□ -0.42
CTSA-216ENST00000607212 SELEP16581 610 aa12.44□□□□□ -0.42
CTSA-216ENST00000607212 FPR3P25089 353 aa12.44□□□□□ -0.42
CTSA-216ENST00000607212 SDHAP31040 664 aa12.44□□□□□ -0.42
CTSA-216ENST00000607212 LIPEQ05469 1076 aa12.44□□□□□ -0.42
CTSA-216ENST00000607212 FHL1Q13642 323 aa12.44□□□□□ -0.42
CTSA-216ENST00000607212 GPR139Q6DWJ6 353 aa12.44□□□□□ -0.42
CTSA-216ENST00000607212 ARPINQ7Z6K5 226 aa12.44□□□□□ -0.42
CTSA-216ENST00000607212 BOLLQ8N9W6 283 aaKnown RBP12.44□□□□□ -0.42
CTSA-216ENST00000607212 GJC3Q8NFK1 279 aa12.44□□□□□ -0.42
CTSA-216ENST00000607212 OR10S1Q8NGN2 331 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms