RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 RTL9Q8NET4 1388 aa3.76□□□□□ -1.81
LINC00397-202ENST00000606785 ZNF729A6NN14 1252 aaPredicted RBP3.76□□□□□ -1.81
LINC00397-202ENST00000606785 LRRN3E7EW58 273 aa3.76□□□□□ -1.81
LINC00397-202ENST00000606785 TOR1AO14656 332 aa3.76□□□□□ -1.81
LINC00397-202ENST00000606785 TOX3O15405 576 aaPredicted RBP3.76□□□□□ -1.81
LINC00397-202ENST00000606785 EEDO75530 441 aaKnown RBP3.76□□□□□ -1.81
LINC00397-202ENST00000606785 TNNC2P02585 160 aa3.76□□□□□ -1.81
LINC00397-202ENST00000606785 CCL2P13500 99 aa3.76□□□□□ -1.81
LINC00397-202ENST00000606785 BCKDHBP21953 392 aa3.76□□□□□ -1.81
LINC00397-202ENST00000606785 WARSP23381 471 aaKnown RBP3.76□□□□□ -1.81
LINC00397-202ENST00000606785 SERPINB5P36952 375 aa3.76□□□□□ -1.81
LINC00397-202ENST00000606785 HSPA9P38646 679 aaKnown RBP3.76□□□□□ -1.81
LINC00397-202ENST00000606785 VDAC2P45880 294 aaPredicted RBP3.76□□□□□ -1.81
LINC00397-202ENST00000606785 RGRP47804 291 aa3.76□□□□□ -1.81
LINC00397-202ENST00000606785 HCAR3P49019 387 aa3.76□□□□□ -1.81
LINC00397-202ENST00000606785 CDK9P50750 372 aaKnown RBP3.76□□□□□ -1.81
LINC00397-202ENST00000606785 SSR4P51571 173 aa3.76□□□□□ -1.81
LINC00397-202ENST00000606785 BCAP31P51572 246 aa3.76□□□□□ -1.81
LINC00397-202ENST00000606785 AP2S1P53680 142 aaPredicted RBP3.76□□□□□ -1.81
LINC00397-202ENST00000606785 DLX1P56177 255 aa3.76□□□□□ -1.81
LINC00397-202ENST00000606785 TAS2R60P59551 318 aa3.76□□□□□ -1.81
LINC00397-202ENST00000606785 AP3S2P59780 193 aa3.76□□□□□ -1.81
LINC00397-202ENST00000606785 ACTBP60709 375 aa3.76□□□□□ -1.81
LINC00397-202ENST00000606785 AP1S1P61966 158 aa3.76□□□□□ -1.81
LINC00397-202ENST00000606785 RAB11AP62491 216 aa3.76□□□□□ -1.81
LINC00397-202ENST00000606785 ACTA2P62736 377 aa3.76□□□□□ -1.81
LINC00397-202ENST00000606785 ACTG1P63261 375 aa3.76□□□□□ -1.81
LINC00397-202ENST00000606785 ACTG2P63267 376 aa3.76□□□□□ -1.81
LINC00397-202ENST00000606785 ACTC1P68032 377 aa3.76□□□□□ -1.81
LINC00397-202ENST00000606785 ACTA1P68133 377 aa3.76□□□□□ -1.81
LINC00397-202ENST00000606785 IRF8Q02556 426 aa3.76□□□□□ -1.81
LINC00397-202ENST00000606785 PDIA2Q13087 525 aaKnown RBP3.76□□□□□ -1.81
LINC00397-202ENST00000606785 RAB11BQ15907 218 aa3.76□□□□□ -1.81
LINC00397-202ENST00000606785 SOHLH1Q5JUK2 328 aa3.76□□□□□ -1.81
LINC00397-202ENST00000606785 VAX1Q5SQQ9 334 aa3.76□□□□□ -1.81
LINC00397-202ENST00000606785 C5orf46Q6UWT4 87 aa3.76□□□□□ -1.81
LINC00397-202ENST00000606785 GSG1LQ6UXU4 331 aa3.76□□□□□ -1.81
LINC00397-202ENST00000606785 SMIM15Q7Z3B0 74 aa3.76□□□□□ -1.81
LINC00397-202ENST00000606785 PEX26Q7Z412 305 aa3.76□□□□□ -1.81
LINC00397-202ENST00000606785 HORMAD1Q86X24 394 aa3.76□□□□□ -1.81
LINC00397-202ENST00000606785 LRRC8AQ8IWT6 810 aa3.76□□□□□ -1.81
LINC00397-202ENST00000606785 ZNF100Q8IYN0 542 aa3.76□□□□□ -1.81
LINC00397-202ENST00000606785 CYP4Z2PQ8N1L4 340 aa3.76□□□□□ -1.81
LINC00397-202ENST00000606785 DTX3LQ8TDB6 740 aa3.76□□□□□ -1.81
LINC00397-202ENST00000606785 CXorf40AQ8TE69 158 aa3.76□□□□□ -1.81
LINC00397-202ENST00000606785 RAB1CQ92928 201 aa3.76□□□□□ -1.81
LINC00397-202ENST00000606785 CPNE4Q96A23 557 aaPredicted RBP3.76□□□□□ -1.81
LINC00397-202ENST00000606785 MRGPRFQ96AM1 343 aa3.76□□□□□ -1.81
LINC00397-202ENST00000606785 RARRES2Q99969 163 aa3.76□□□□□ -1.81
LINC00397-202ENST00000606785 NICN1Q9BSH3 213 aa3.76□□□□□ -1.81
LINC00397-202ENST00000606785 RIOK2Q9BVS4 552 aaKnown RBP3.76□□□□□ -1.81
LINC00397-202ENST00000606785 ANGPTL4Q9BY76 406 aa3.76□□□□□ -1.81
LINC00397-202ENST00000606785 ZYG11BQ9C0D3 744 aa3.76□□□□□ -1.81
LINC00397-202ENST00000606785 POLR2J2Q9GZM3 115 aaKnown RBP3.76□□□□□ -1.81
LINC00397-202ENST00000606785 ALX4Q9H161 411 aaPredicted RBP3.76□□□□□ -1.81
LINC00397-202ENST00000606785 POLR2J3Q9H1A7 115 aaKnown RBP3.76□□□□□ -1.81
LINC00397-202ENST00000606785 FBXO44Q9H4M3 255 aa3.76□□□□□ -1.81
LINC00397-202ENST00000606785 C11orf49Q9H6J7 331 aa3.76□□□□□ -1.81
LINC00397-202ENST00000606785 SH2D2AQ9NP31 389 aa3.76□□□□□ -1.81
LINC00397-202ENST00000606785 TREX1Q9NSU2 369 aa3.76□□□□□ -1.81
LINC00397-202ENST00000606785 AIG1Q9NVV5 245 aa3.76□□□□□ -1.81
LINC00397-202ENST00000606785 CALYQ9NYX4 217 aa3.76□□□□□ -1.81
LINC00397-202ENST00000606785 UVRAGQ9P2Y5 699 aa3.76□□□□□ -1.81
LINC00397-202ENST00000606785 NAGKQ9UJ70 344 aa3.76□□□□□ -1.81
LINC00397-202ENST00000606785 HYOU1Q9Y4L1 999 aa3.76□□□□□ -1.81
LINC00397-202ENST00000606785 CNTNAP1P78357 1384 aa3.76□□□□□ -1.81
LINC00397-202ENST00000606785 EIF3AQ14152 1382 aaKnown RBP3.76□□□□□ -1.81
LINC00397-202ENST00000606785 RAI1Q7Z5J4 1906 aaPredicted RBP3.76□□□□□ -1.81
LINC00397-202ENST00000606785 RAB3GAP2Q9H2M9 1393 aa3.76□□□□□ -1.81
LINC00397-202ENST00000606785 COL5A2P05997 1499 aaPredicted RBP3.75□□□□□ -1.81
LINC00397-202ENST00000606785 KCNE1BA0A087WTH5 132 aa3.75□□□□□ -1.81
LINC00397-202ENST00000606785 PDZK1P1A8MUH7 402 aa3.75□□□□□ -1.81
LINC00397-202ENST00000606785 LINC00587B1AMM8 73 aa3.75□□□□□ -1.81
LINC00397-202ENST00000606785 C12orf77C9JDV5 145 aa3.75□□□□□ -1.81
LINC00397-202ENST00000606785 CDC7O00311 574 aa3.75□□□□□ -1.81
LINC00397-202ENST00000606785 MRPS12O15235 138 aaKnown RBP3.75□□□□□ -1.81
LINC00397-202ENST00000606785 SCN2BO60939 215 aa3.75□□□□□ -1.81
LINC00397-202ENST00000606785 SNAI1O95863 264 aaPredicted RBP3.75□□□□□ -1.81
LINC00397-202ENST00000606785 FAM228BP0C875 321 aa3.75□□□□□ -1.81
LINC00397-202ENST00000606785 P0C879 139 aa3.75□□□□□ -1.81
LINC00397-202ENST00000606785 NQO2P16083 231 aa3.75□□□□□ -1.81
LINC00397-202ENST00000606785 PSMB1P20618 241 aaKnown RBP3.75□□□□□ -1.81
LINC00397-202ENST00000606785 F8A1P23610 371 aa3.75□□□□□ -1.81
LINC00397-202ENST00000606785 HSD11B1P28845 292 aa3.75□□□□□ -1.81
LINC00397-202ENST00000606785 CRABP1P29762 137 aa3.75□□□□□ -1.81
LINC00397-202ENST00000606785 ACTR1BP42025 376 aa3.75□□□□□ -1.81
LINC00397-202ENST00000606785 GPR6P46095 362 aaPredicted RBP3.75□□□□□ -1.81
LINC00397-202ENST00000606785 SLCO1A2P46721 670 aa3.75□□□□□ -1.81
LINC00397-202ENST00000606785 EMP2P54851 167 aa3.75□□□□□ -1.81
LINC00397-202ENST00000606785 UGT2B15P54855 530 aa3.75□□□□□ -1.81
LINC00397-202ENST00000606785 RIPPLY3P57055 190 aa3.75□□□□□ -1.81
LINC00397-202ENST00000606785 DAOAP59103 153 aa3.75□□□□□ -1.81
LINC00397-202ENST00000606785 TNNC1P63316 161 aa3.75□□□□□ -1.81
LINC00397-202ENST00000606785 ACVR1Q04771 509 aa3.75□□□□□ -1.81
LINC00397-202ENST00000606785 GOLGA7BQ2TAP0 167 aa3.75□□□□□ -1.81
LINC00397-202ENST00000606785 ACTBL2Q562R1 376 aa3.75□□□□□ -1.81
LINC00397-202ENST00000606785 GPR157Q5UAW9 335 aa3.75□□□□□ -1.81
LINC00397-202ENST00000606785 ANKRD26P1Q6NSI1 321 aa3.75□□□□□ -1.81
LINC00397-202ENST00000606785 DPPA2Q7Z7J5 298 aa3.75□□□□□ -1.81
LINC00397-202ENST00000606785 SETD3Q86TU7 594 aaPredicted RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms